Protein–RNA interactions for Protein: Q9Z1J2

Nek4, Serine/threonine-protein kinase Nek4, mousemouse

Predictions only

Length 792 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nek4Q9Z1J2 Gm24841-201ENSMUST00000158676 357 ntBASIC20.83■□□□□ 0.93
Nek4Q9Z1J2 E030044B06Rik-201ENSMUST00000181195 1266 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
Nek4Q9Z1J2 Gnao1-207ENSMUST00000138659 5526 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
Nek4Q9Z1J2 Ppp2ca-201ENSMUST00000020608 7102 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Nek4Q9Z1J2 Plppr2-203ENSMUST00000190387 2608 ntAPPRIS P2 TSL 1 (best) BASIC20.83■□□□□ 0.92
Nek4Q9Z1J2 Sbf1-205ENSMUST00000144585 6165 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.92
Nek4Q9Z1J2 Sncb-201ENSMUST00000036825 1351 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Nek4Q9Z1J2 Esrrb-201ENSMUST00000021680 2136 ntAPPRIS P1 TSL 5 BASIC20.83■□□□□ 0.92
Nek4Q9Z1J2 Rhot2-201ENSMUST00000043897 3189 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Nek4Q9Z1J2 Shroom3-211ENSMUST00000225438 5742 ntBASIC20.83■□□□□ 0.92
Nek4Q9Z1J2 Ankib1-201ENSMUST00000043551 6426 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Nek4Q9Z1J2 Klf3-201ENSMUST00000165536 5221 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Nek4Q9Z1J2 Abi1-215ENSMUST00000178908 2239 ntAPPRIS ALT1 TSL 5 BASIC20.82■□□□□ 0.92
Nek4Q9Z1J2 Relb-201ENSMUST00000049912 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
Nek4Q9Z1J2 Atp6v1c1-201ENSMUST00000022904 2071 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Nek4Q9Z1J2 Ulk1-201ENSMUST00000031490 5213 ntAPPRIS P3 TSL 1 (best) BASIC20.82■□□□□ 0.92
Nek4Q9Z1J2 Asic2-201ENSMUST00000021045 3436 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
Nek4Q9Z1J2 Rpl36al-202ENSMUST00000110619 1276 ntAPPRIS P1 BASIC20.82■□□□□ 0.92
Nek4Q9Z1J2 Gm10698-201ENSMUST00000182663 604 ntBASIC20.82■□□□□ 0.92
Nek4Q9Z1J2 CT025689.6-201ENSMUST00000224991 1104 ntBASIC20.82■□□□□ 0.92
Nek4Q9Z1J2 Vgll2-201ENSMUST00000058347 966 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
Nek4Q9Z1J2 Sema6c-214ENSMUST00000202315 2843 ntAPPRIS P3 TSL 1 (best) BASIC20.82■□□□□ 0.92
Nek4Q9Z1J2 Gnb1-202ENSMUST00000105616 3088 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Nek4Q9Z1J2 Grina-201ENSMUST00000023225 1693 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Nek4Q9Z1J2 Scamp3-201ENSMUST00000029684 1489 ntAPPRIS P3 TSL 1 (best) BASIC20.81■□□□□ 0.92
Nek4Q9Z1J2 Gm27029-201ENSMUST00000107257 1898 ntAPPRIS ALT2 TSL 5 BASIC20.81■□□□□ 0.92
Nek4Q9Z1J2 Rbl2-201ENSMUST00000034091 4925 ntAPPRIS P3 TSL 1 (best) BASIC20.81■□□□□ 0.92
Nek4Q9Z1J2 Ube2d3-202ENSMUST00000166033 2504 ntAPPRIS P2 TSL 1 (best) BASIC20.81■□□□□ 0.92
Nek4Q9Z1J2 Cadm3-201ENSMUST00000005470 2518 ntTSL 5 BASIC20.81■□□□□ 0.92
Nek4Q9Z1J2 Mapk8ip3-221ENSMUST00000178969 5579 ntAPPRIS ALT2 TSL 5 BASIC20.81■□□□□ 0.92
Nek4Q9Z1J2 Aldh5a1-201ENSMUST00000037615 5647 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Nek4Q9Z1J2 Pcmt1-202ENSMUST00000159917 2491 ntAPPRIS P3 TSL 1 (best) BASIC20.81■□□□□ 0.92
Nek4Q9Z1J2 Nudt4-201ENSMUST00000020217 3210 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Nek4Q9Z1J2 Gm44899-201ENSMUST00000207451 391 ntTSL 3 BASIC20.81■□□□□ 0.92
Nek4Q9Z1J2 Gm45894-201ENSMUST00000211940 651 ntTSL 2 BASIC20.81■□□□□ 0.92
Nek4Q9Z1J2 Gm26596-201ENSMUST00000180464 2655 ntBASIC20.81■□□□□ 0.92
Nek4Q9Z1J2 CT010444.2-201ENSMUST00000217877 1629 ntBASIC20.81■□□□□ 0.92
Nek4Q9Z1J2 Pitx3-201ENSMUST00000026259 1380 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Nek4Q9Z1J2 Aifm1-201ENSMUST00000037349 2237 ntAPPRIS P3 TSL 1 (best) BASIC20.81■□□□□ 0.92
Nek4Q9Z1J2 Kif7-202ENSMUST00000178048 4524 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
Nek4Q9Z1J2 Tmprss5-201ENSMUST00000070390 2047 ntAPPRIS P2 TSL 1 (best) BASIC20.8■□□□□ 0.92
Nek4Q9Z1J2 Rab35-201ENSMUST00000031492 2820 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Nek4Q9Z1J2 2310002F09Rik-201ENSMUST00000181454 1607 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Nek4Q9Z1J2 Gm9694-201ENSMUST00000193347 1189 ntBASIC20.8■□□□□ 0.92
Nek4Q9Z1J2 Stmn1-201ENSMUST00000030636 1060 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Nek4Q9Z1J2 Mrpl10-202ENSMUST00000054252 744 ntTSL 5 BASIC20.8■□□□□ 0.92
Nek4Q9Z1J2 Necab3-202ENSMUST00000109716 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
Nek4Q9Z1J2 Relt-201ENSMUST00000008462 2851 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Nek4Q9Z1J2 Lrrtm1-202ENSMUST00000159616 2541 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Nek4Q9Z1J2 A930001A20Rik-201ENSMUST00000182586 1366 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Nek4Q9Z1J2 Phtf1-201ENSMUST00000055425 3060 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Nek4Q9Z1J2 Lhx6-208ENSMUST00000148852 1481 ntTSL 5 BASIC20.8■□□□□ 0.92
Nek4Q9Z1J2 Tmem131-208ENSMUST00000194563 6698 ntAPPRIS P1 TSL 5 BASIC20.8■□□□□ 0.92
Nek4Q9Z1J2 Dag1-201ENSMUST00000080435 4364 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Nek4Q9Z1J2 Rab37-202ENSMUST00000067754 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
Nek4Q9Z1J2 Tmem175-204ENSMUST00000146207 1686 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Nek4Q9Z1J2 Rnf146-202ENSMUST00000160144 4323 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Nek4Q9Z1J2 Uso1-201ENSMUST00000031355 3898 ntAPPRIS P2 TSL 1 (best) BASIC20.79■□□□□ 0.92
Nek4Q9Z1J2 Dhx36-201ENSMUST00000029336 5620 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Nek4Q9Z1J2 Il6st-208ENSMUST00000184311 2985 ntAPPRIS P2 TSL 5 BASIC20.79■□□□□ 0.92
Nek4Q9Z1J2 Gm26580-201ENSMUST00000181002 2095 ntTSL 5 BASIC20.79■□□□□ 0.92
Nek4Q9Z1J2 Ptpre-207ENSMUST00000211140 5753 ntAPPRIS P3 TSL 1 (best) BASIC20.79■□□□□ 0.92
Nek4Q9Z1J2 Ipo9-201ENSMUST00000041023 6247 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Nek4Q9Z1J2 Dok4-201ENSMUST00000046461 2590 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Nek4Q9Z1J2 Rbm39-202ENSMUST00000109584 667 ntTSL 5 BASIC20.79■□□□□ 0.92
Nek4Q9Z1J2 4930467K11Rik-201ENSMUST00000180831 723 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
Nek4Q9Z1J2 6230400D17Rik-202ENSMUST00000224976 1019 ntBASIC20.79■□□□□ 0.92
Nek4Q9Z1J2 A930018P22Rik-201ENSMUST00000040374 822 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Nek4Q9Z1J2 Gm10638-201ENSMUST00000098532 905 ntAPPRIS P1 BASIC20.79■□□□□ 0.92
Nek4Q9Z1J2 Ctla2a-201ENSMUST00000021880 1373 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Nek4Q9Z1J2 Pigl-201ENSMUST00000014389 2174 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Nek4Q9Z1J2 Pid1-201ENSMUST00000168574 2664 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Nek4Q9Z1J2 Fhl1-203ENSMUST00000114769 2770 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
Nek4Q9Z1J2 Gbx1-201ENSMUST00000088311 3475 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Nek4Q9Z1J2 Ntng1-204ENSMUST00000106571 1446 ntTSL 5 BASIC20.78■□□□□ 0.92
Nek4Q9Z1J2 Ntng1-210ENSMUST00000138953 1443 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Nek4Q9Z1J2 Vmn1r17-201ENSMUST00000227186 2234 ntAPPRIS P2 BASIC20.78■□□□□ 0.92
Nek4Q9Z1J2 Ostf1-201ENSMUST00000025631 2726 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Nek4Q9Z1J2 Smurf2-201ENSMUST00000092517 3125 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Nek4Q9Z1J2 Siglecf-202ENSMUST00000121494 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
Nek4Q9Z1J2 Gm13816-201ENSMUST00000152230 715 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Nek4Q9Z1J2 Gm11273-201ENSMUST00000044043 390 ntAPPRIS P1 BASIC20.78■□□□□ 0.92
Nek4Q9Z1J2 Map3k5-201ENSMUST00000095806 5450 ntAPPRIS P2 TSL 1 (best) BASIC20.78■□□□□ 0.92
Nek4Q9Z1J2 Wasf1-202ENSMUST00000105509 2719 ntAPPRIS P1 TSL 5 BASIC20.78■□□□□ 0.92
Nek4Q9Z1J2 2610301B20Rik-201ENSMUST00000080517 2116 ntAPPRIS P2 TSL 1 (best) BASIC20.78■□□□□ 0.92
Nek4Q9Z1J2 Abhd5-204ENSMUST00000156520 3157 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Nek4Q9Z1J2 Arntl-204ENSMUST00000210238 2976 ntAPPRIS P1 TSL 5 BASIC20.78■□□□□ 0.92
Nek4Q9Z1J2 Tubgcp4-203ENSMUST00000110658 4250 ntAPPRIS ALT1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Nek4Q9Z1J2 Fam71e1-202ENSMUST00000205359 1307 ntAPPRIS ALT2 TSL 2 BASIC20.78■□□□□ 0.92
Nek4Q9Z1J2 Nadk2-203ENSMUST00000100790 3665 ntAPPRIS ALT2 TSL 5 BASIC20.77■□□□□ 0.92
Nek4Q9Z1J2 Arid1a-205ENSMUST00000145664 8187 ntAPPRIS ALT2 TSL 2 BASIC20.77■□□□□ 0.92
Nek4Q9Z1J2 Acaa1a-201ENSMUST00000039784 1762 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Nek4Q9Z1J2 Hist1h2bh-201ENSMUST00000224359 1679 ntAPPRIS P1 BASIC20.77■□□□□ 0.92
Nek4Q9Z1J2 Atp11a-201ENSMUST00000033818 7549 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
Nek4Q9Z1J2 Dlgap4-205ENSMUST00000109567 4840 ntAPPRIS ALT2 TSL 5 BASIC20.77■□□□□ 0.92
Nek4Q9Z1J2 Ube2i-207ENSMUST00000172868 2755 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
Nek4Q9Z1J2 Rcbtb2-226ENSMUST00000171767 2692 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
Nek4Q9Z1J2 Shisa2-201ENSMUST00000053949 3119 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Nek4Q9Z1J2 Gm15743-202ENSMUST00000182690 1901 ntBASIC20.77■□□□□ 0.92
Nek4Q9Z1J2 Atp5g1-203ENSMUST00000107686 691 ntAPPRIS P1 TSL 3 BASIC20.77■□□□□ 0.92
Retrieved 100 of 76,532 protein–RNA pairs in 29.3 ms