Protein–RNA interactions for Protein: Q9EQG9

Col4a3bp, Collagen type IV alpha-3-binding protein, mousemouse

Predictions only

Length 624 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col4a3bpQ9EQG9 Gm1673-203ENSMUST00000114383 511 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
Col4a3bpQ9EQG9 Gm715-201ENSMUST00000117865 831 ntBASIC19.61■□□□□ 0.73
Col4a3bpQ9EQG9 Gm36736-201ENSMUST00000206060 646 ntTSL 3 BASIC19.61■□□□□ 0.73
Col4a3bpQ9EQG9 6530437J22Rik-201ENSMUST00000207515 773 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Col4a3bpQ9EQG9 Ilk-212ENSMUST00000163389 1749 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Col4a3bpQ9EQG9 Kctd9-205ENSMUST00000152243 2528 ntTSL 2 BASIC19.61■□□□□ 0.73
Col4a3bpQ9EQG9 Nfib-205ENSMUST00000107247 3267 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
Col4a3bpQ9EQG9 Gm16835-201ENSMUST00000140488 2809 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Col4a3bpQ9EQG9 9530080O11Rik-201ENSMUST00000137239 1475 ntTSL 2 BASIC19.6■□□□□ 0.73
Col4a3bpQ9EQG9 Cpeb2-204ENSMUST00000166713 6846 ntAPPRIS ALT2 TSL 5 BASIC19.6■□□□□ 0.73
Col4a3bpQ9EQG9 Vps53-203ENSMUST00000108419 2209 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Col4a3bpQ9EQG9 Bean1-204ENSMUST00000171018 3386 ntAPPRIS P4 TSL 1 (best) BASIC19.6■□□□□ 0.73
Col4a3bpQ9EQG9 Haglr-201ENSMUST00000100000 2085 ntBASIC19.6■□□□□ 0.73
Col4a3bpQ9EQG9 Sbf1-201ENSMUST00000123791 6190 ntAPPRIS P3 TSL 1 (best) BASIC19.6■□□□□ 0.73
Col4a3bpQ9EQG9 Znrf1-201ENSMUST00000095176 3108 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Col4a3bpQ9EQG9 Pgap3-205ENSMUST00000128897 1264 ntTSL 5 BASIC19.6■□□□□ 0.73
Col4a3bpQ9EQG9 Insig2-203ENSMUST00000159085 1252 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Col4a3bpQ9EQG9 Nnat-201ENSMUST00000088484 458 ntTSL 2 BASIC19.6■□□□□ 0.73
Col4a3bpQ9EQG9 Ube2k-201ENSMUST00000142407 4893 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Col4a3bpQ9EQG9 Itga9-201ENSMUST00000044165 7020 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Col4a3bpQ9EQG9 Gm27029-201ENSMUST00000107257 1898 ntAPPRIS ALT2 TSL 5 BASIC19.6■□□□□ 0.73
Col4a3bpQ9EQG9 Zbtb45-201ENSMUST00000051390 2171 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Col4a3bpQ9EQG9 Lsm1-201ENSMUST00000038421 2663 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Col4a3bpQ9EQG9 Sharpin-201ENSMUST00000023211 1734 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Col4a3bpQ9EQG9 Grina-201ENSMUST00000023225 1693 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Col4a3bpQ9EQG9 Gm26795-201ENSMUST00000180993 1952 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Col4a3bpQ9EQG9 Zkscan14-201ENSMUST00000031632 1967 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Col4a3bpQ9EQG9 Atp5g1-203ENSMUST00000107686 691 ntAPPRIS P1 TSL 3 BASIC19.59■□□□□ 0.73
Col4a3bpQ9EQG9 Naa10-205ENSMUST00000114390 797 ntTSL 5 BASIC19.59■□□□□ 0.73
Col4a3bpQ9EQG9 D330023K18Rik-201ENSMUST00000133550 920 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Col4a3bpQ9EQG9 Ccdc58-202ENSMUST00000163352 970 ntTSL 3 BASIC19.59■□□□□ 0.73
Col4a3bpQ9EQG9 Ccdc58-203ENSMUST00000164916 1096 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Col4a3bpQ9EQG9 Gm37292-201ENSMUST00000192062 758 ntBASIC19.59■□□□□ 0.73
Col4a3bpQ9EQG9 Zfp787-204ENSMUST00000207628 576 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Col4a3bpQ9EQG9 Rassf7-201ENSMUST00000046890 1525 ntAPPRIS P2 TSL 1 (best) BASIC19.59■□□□□ 0.73
Col4a3bpQ9EQG9 Agpat3-203ENSMUST00000105388 3681 ntAPPRIS P1 TSL 5 BASIC19.59■□□□□ 0.73
Col4a3bpQ9EQG9 Cdv3-207ENSMUST00000190226 3107 ntTSL 5 BASIC19.59■□□□□ 0.73
Col4a3bpQ9EQG9 Runx1t1-201ENSMUST00000006761 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
Col4a3bpQ9EQG9 Otud5-202ENSMUST00000115665 3821 ntTSL 5 BASIC19.59■□□□□ 0.73
Col4a3bpQ9EQG9 Camk2d-228ENSMUST00000200171 5396 ntTSL 5 BASIC19.59■□□□□ 0.73
Col4a3bpQ9EQG9 Wnt4-201ENSMUST00000045747 4194 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Col4a3bpQ9EQG9 Slc25a39-202ENSMUST00000107098 1606 ntAPPRIS ALT1 TSL 5 BASIC19.58■□□□□ 0.73
Col4a3bpQ9EQG9 Snap91-202ENSMUST00000074468 4336 ntAPPRIS ALT2 TSL 5 BASIC19.58■□□□□ 0.73
Col4a3bpQ9EQG9 Rybp-201ENSMUST00000101118 4503 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Col4a3bpQ9EQG9 Nfkbib-201ENSMUST00000032815 2061 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Col4a3bpQ9EQG9 Atp11a-202ENSMUST00000091237 7443 ntAPPRIS P3 TSL 1 (best) BASIC19.58■□□□□ 0.73
Col4a3bpQ9EQG9 Coq8b-202ENSMUST00000108378 2276 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Col4a3bpQ9EQG9 Phb-204ENSMUST00000125172 1799 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Col4a3bpQ9EQG9 Gm16127-201ENSMUST00000131619 234 ntTSL 5 BASIC19.58■□□□□ 0.72
Col4a3bpQ9EQG9 AL672049.1-201ENSMUST00000197943 91 ntBASIC19.58■□□□□ 0.72
Col4a3bpQ9EQG9 Gm7579-201ENSMUST00000097943 732 ntAPPRIS P1 BASIC19.58■□□□□ 0.72
Col4a3bpQ9EQG9 Lzts2-203ENSMUST00000179108 2781 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Col4a3bpQ9EQG9 Gm9954-202ENSMUST00000198686 4725 ntBASIC19.58■□□□□ 0.72
Col4a3bpQ9EQG9 Lrrtm1-202ENSMUST00000159616 2541 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Col4a3bpQ9EQG9 Tlcd1-204ENSMUST00000127587 1412 ntAPPRIS P3 TSL 1 (best) BASIC19.58■□□□□ 0.72
Col4a3bpQ9EQG9 Ebf3-204ENSMUST00000169486 4994 ntAPPRIS ALT1 TSL 5 BASIC19.57■□□□□ 0.72
Col4a3bpQ9EQG9 B4galnt4-201ENSMUST00000048002 3556 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Col4a3bpQ9EQG9 Tmed3-201ENSMUST00000058488 1346 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Col4a3bpQ9EQG9 Atp8a1-204ENSMUST00000113652 854 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Col4a3bpQ9EQG9 Tarbp1-201ENSMUST00000170518 6383 ntAPPRIS P1 TSL 5 BASIC19.57■□□□□ 0.72
Col4a3bpQ9EQG9 Gm28914-201ENSMUST00000188115 667 ntTSL 2 BASIC19.57■□□□□ 0.72
Col4a3bpQ9EQG9 Rwdd1-201ENSMUST00000019917 1090 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Col4a3bpQ9EQG9 Gm4974-201ENSMUST00000209974 875 ntBASIC19.57■□□□□ 0.72
Col4a3bpQ9EQG9 AC175538.1-201ENSMUST00000225343 1269 ntBASIC19.57■□□□□ 0.72
Col4a3bpQ9EQG9 Mrps12-201ENSMUST00000056078 722 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Col4a3bpQ9EQG9 Nmnat3-201ENSMUST00000112935 2166 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Col4a3bpQ9EQG9 Pigl-201ENSMUST00000014389 2174 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Col4a3bpQ9EQG9 Ddx41-204ENSMUST00000224765 2199 ntBASIC19.57■□□□□ 0.72
Col4a3bpQ9EQG9 Adgrl1-207ENSMUST00000141158 8181 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Col4a3bpQ9EQG9 A330009N23Rik-201ENSMUST00000180639 1392 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Col4a3bpQ9EQG9 Gm26580-201ENSMUST00000181002 2095 ntTSL 5 BASIC19.56■□□□□ 0.72
Col4a3bpQ9EQG9 Arntl-204ENSMUST00000210238 2976 ntAPPRIS P1 TSL 5 BASIC19.56■□□□□ 0.72
Col4a3bpQ9EQG9 Relb-201ENSMUST00000049912 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
Col4a3bpQ9EQG9 Arhgef17-204ENSMUST00000209041 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
Col4a3bpQ9EQG9 Mettl4-ps1-202ENSMUST00000130218 1323 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Col4a3bpQ9EQG9 Pcdhac2-201ENSMUST00000047479 5888 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Col4a3bpQ9EQG9 Rev1-201ENSMUST00000027251 4262 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Col4a3bpQ9EQG9 Tmc6-202ENSMUST00000103025 1279 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Col4a3bpQ9EQG9 Gm13647-201ENSMUST00000154654 622 ntTSL 5 BASIC19.56■□□□□ 0.72
Col4a3bpQ9EQG9 Smim22-201ENSMUST00000178155 429 ntAPPRIS P3 TSL 1 (best) BASIC19.56■□□□□ 0.72
Col4a3bpQ9EQG9 Gm16998-201ENSMUST00000181899 1230 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Col4a3bpQ9EQG9 Arfip2-212ENSMUST00000209550 1141 ntAPPRIS ALT1 TSL 5 BASIC19.56■□□□□ 0.72
Col4a3bpQ9EQG9 Arfip2-214ENSMUST00000210911 938 ntTSL 5 BASIC19.56■□□□□ 0.72
Col4a3bpQ9EQG9 Fgf8-202ENSMUST00000026241 1168 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Col4a3bpQ9EQG9 Id1-201ENSMUST00000038368 934 ntAPPRIS P2 TSL 1 (best) BASIC19.56■□□□□ 0.72
Col4a3bpQ9EQG9 Fam131b-203ENSMUST00000143278 4104 ntAPPRIS P3 TSL 1 (best) BASIC19.56■□□□□ 0.72
Col4a3bpQ9EQG9 Lrch3-203ENSMUST00000135193 2794 ntAPPRIS ALT2 TSL 5 BASIC19.56■□□□□ 0.72
Col4a3bpQ9EQG9 Hand1-201ENSMUST00000036917 1904 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Col4a3bpQ9EQG9 Rbm12b1-202ENSMUST00000069128 3069 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Col4a3bpQ9EQG9 Siglecf-202ENSMUST00000121494 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
Col4a3bpQ9EQG9 Gpr180-201ENSMUST00000022728 1875 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Col4a3bpQ9EQG9 Tm9sf1-205ENSMUST00000122358 2517 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Col4a3bpQ9EQG9 Gpr20-201ENSMUST00000064166 2144 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Col4a3bpQ9EQG9 Fbxl15-201ENSMUST00000026256 1348 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Col4a3bpQ9EQG9 Cap1-202ENSMUST00000106255 2737 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Col4a3bpQ9EQG9 Scamp3-201ENSMUST00000029684 1489 ntAPPRIS P3 TSL 1 (best) BASIC19.55■□□□□ 0.72
Col4a3bpQ9EQG9 Tle4-201ENSMUST00000052011 4555 ntAPPRIS P2 TSL 1 (best) BASIC19.55■□□□□ 0.72
Col4a3bpQ9EQG9 Trp73-203ENSMUST00000105643 1916 ntAPPRIS ALT2 TSL 5 BASIC19.55■□□□□ 0.72
Col4a3bpQ9EQG9 Rcbtb2-226ENSMUST00000171767 2692 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Col4a3bpQ9EQG9 Rint1-204ENSMUST00000117783 560 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Retrieved 100 of 76,532 protein–RNA pairs in 29 ms