Protein–RNA interactions for Protein: Q9D0N7

Chaf1b, Chromatin assembly factor 1 subunit B, mousemouse

Predictions only

Length 572 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chaf1bQ9D0N7 Mag-203ENSMUST00000187137 2434 ntAPPRIS P2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Chaf1bQ9D0N7 Sox14-201ENSMUST00000054819 2065 ntAPPRIS P1 BASIC16.14■□□□□ 0.17
Chaf1bQ9D0N7 Podnl1-201ENSMUST00000093380 2090 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Chaf1bQ9D0N7 Ccdc105-201ENSMUST00000105383 1714 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Chaf1bQ9D0N7 Runx2-203ENSMUST00000113572 6463 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Chaf1bQ9D0N7 Adamts19-201ENSMUST00000052907 4666 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Chaf1bQ9D0N7 Pomp-201ENSMUST00000031654 1579 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Chaf1bQ9D0N7 Ptges3-202ENSMUST00000084771 1559 ntTSL 5 BASIC16.13■□□□□ 0.17
Chaf1bQ9D0N7 Gas6-201ENSMUST00000033828 2548 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Chaf1bQ9D0N7 Zfyve19-201ENSMUST00000090174 2008 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Chaf1bQ9D0N7 Dnaaf3-201ENSMUST00000094897 2224 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Chaf1bQ9D0N7 Fam219b-202ENSMUST00000114200 3017 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Chaf1bQ9D0N7 Alad-202ENSMUST00000107444 1247 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Chaf1bQ9D0N7 Dlx6-203ENSMUST00000171311 1071 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Chaf1bQ9D0N7 Fam126a-202ENSMUST00000101513 1679 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Chaf1bQ9D0N7 Fam98b-201ENSMUST00000028825 1861 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Chaf1bQ9D0N7 Gm26526-201ENSMUST00000181075 2927 ntTSL 5 BASIC16.13■□□□□ 0.17
Chaf1bQ9D0N7 Hapln2-201ENSMUST00000005014 1711 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Chaf1bQ9D0N7 9430097D07Rik-201ENSMUST00000100190 1501 ntAPPRIS P1 BASIC16.13■□□□□ 0.17
Chaf1bQ9D0N7 Fmnl2-202ENSMUST00000050719 3380 ntTSL 5 BASIC16.13■□□□□ 0.17
Chaf1bQ9D0N7 Zfp367-202ENSMUST00000117241 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Chaf1bQ9D0N7 Ern1-204ENSMUST00000106801 1957 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Chaf1bQ9D0N7 Mtfr1l-202ENSMUST00000116279 1969 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Chaf1bQ9D0N7 Aurkb-201ENSMUST00000021277 1950 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Chaf1bQ9D0N7 Matr3-214ENSMUST00000190029 2845 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
Chaf1bQ9D0N7 Cyp2r1-201ENSMUST00000032908 1627 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Chaf1bQ9D0N7 Fbxl3-206ENSMUST00000145693 3352 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Chaf1bQ9D0N7 Akap8l-201ENSMUST00000050214 2075 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Chaf1bQ9D0N7 Mid1-206ENSMUST00000112107 3194 ntTSL 5 BASIC16.12■□□□□ 0.17
Chaf1bQ9D0N7 Bard1-201ENSMUST00000027393 5659 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Chaf1bQ9D0N7 Pick1-206ENSMUST00000166155 1699 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Chaf1bQ9D0N7 Adnp2-201ENSMUST00000066743 5012 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Chaf1bQ9D0N7 Adamts17-202ENSMUST00000107478 6416 ntAPPRIS ALT2 TSL 5 BASIC16.12■□□□□ 0.17
Chaf1bQ9D0N7 Cep152-201ENSMUST00000089776 5768 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Chaf1bQ9D0N7 Rcc2-202ENSMUST00000071169 3999 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Chaf1bQ9D0N7 Ebf1-203ENSMUST00000109268 2864 ntAPPRIS ALT1 TSL 5 BASIC16.12■□□□□ 0.17
Chaf1bQ9D0N7 Nsmf-207ENSMUST00000116574 2863 ntTSL 5 BASIC16.12■□□□□ 0.17
Chaf1bQ9D0N7 Gm27027-201ENSMUST00000183110 547 ntAPPRIS P1 TSL 3 BASIC16.12■□□□□ 0.17
Chaf1bQ9D0N7 Mir8112-201ENSMUST00000184382 131 ntBASIC16.12■□□□□ 0.17
Chaf1bQ9D0N7 Mrpl2-201ENSMUST00000002844 1031 ntAPPRIS P2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Chaf1bQ9D0N7 Med30-201ENSMUST00000037115 1007 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Chaf1bQ9D0N7 Nsun5-201ENSMUST00000000940 2243 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Chaf1bQ9D0N7 Ubp1-202ENSMUST00000084885 3850 ntAPPRIS P4 TSL 5 BASIC16.12■□□□□ 0.17
Chaf1bQ9D0N7 Sfrp2-201ENSMUST00000029625 2003 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Chaf1bQ9D0N7 Guca1b-202ENSMUST00000145462 1556 ntTSL 2 BASIC16.12■□□□□ 0.17
Chaf1bQ9D0N7 Rab37-202ENSMUST00000067754 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Chaf1bQ9D0N7 F830208F22Rik-202ENSMUST00000143732 2891 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Chaf1bQ9D0N7 Gm4425-201ENSMUST00000172838 2857 ntTSL 2 BASIC16.12■□□□□ 0.17
Chaf1bQ9D0N7 Trim28-201ENSMUST00000005705 3245 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Chaf1bQ9D0N7 Krt86-201ENSMUST00000088049 1960 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Chaf1bQ9D0N7 Rnf128-201ENSMUST00000113026 2750 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Chaf1bQ9D0N7 Kctd9-205ENSMUST00000152243 2528 ntTSL 2 BASIC16.11■□□□□ 0.17
Chaf1bQ9D0N7 Sept8-201ENSMUST00000108987 4436 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Chaf1bQ9D0N7 Arhgap42-203ENSMUST00000183182 1458 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Chaf1bQ9D0N7 Atp1a1-201ENSMUST00000036493 3679 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Chaf1bQ9D0N7 Fam57b-201ENSMUST00000079423 2328 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Chaf1bQ9D0N7 Wdr41-203ENSMUST00000160115 2851 ntTSL 5 BASIC16.11■□□□□ 0.17
Chaf1bQ9D0N7 1700081N11Rik-202ENSMUST00000221447 569 ntTSL 3 BASIC16.11■□□□□ 0.17
Chaf1bQ9D0N7 Lsm2-201ENSMUST00000007266 873 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Chaf1bQ9D0N7 Nes-201ENSMUST00000090973 6126 ntAPPRIS P2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Chaf1bQ9D0N7 Clasrp-201ENSMUST00000086041 2180 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Chaf1bQ9D0N7 Mbp-201ENSMUST00000047865 2492 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Chaf1bQ9D0N7 Papolb-201ENSMUST00000099400 4239 ntAPPRIS P1 BASIC16.11■□□□□ 0.17
Chaf1bQ9D0N7 Rasgrp2-201ENSMUST00000035716 2219 ntAPPRIS P1 TSL 2 BASIC16.11■□□□□ 0.17
Chaf1bQ9D0N7 Leprotl1-201ENSMUST00000033910 2879 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Chaf1bQ9D0N7 Zfp384-208ENSMUST00000112428 3132 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Chaf1bQ9D0N7 Aida-206ENSMUST00000193625 1810 ntTSL 3 BASIC16.1■□□□□ 0.17
Chaf1bQ9D0N7 Polr3e-203ENSMUST00000207481 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Chaf1bQ9D0N7 Chrna4-201ENSMUST00000067120 4565 ntAPPRIS P2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Chaf1bQ9D0N7 Tuba3a-201ENSMUST00000088246 1509 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Chaf1bQ9D0N7 Slc22a12-201ENSMUST00000113451 2213 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Chaf1bQ9D0N7 Robo3-202ENSMUST00000115038 4797 ntAPPRIS P2 TSL 5 BASIC16.1■□□□□ 0.17
Chaf1bQ9D0N7 Cnpy1-202ENSMUST00000118882 1984 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Chaf1bQ9D0N7 a-202ENSMUST00000109697 705 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
Chaf1bQ9D0N7 Pi16-201ENSMUST00000114699 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Chaf1bQ9D0N7 Cck-203ENSMUST00000215228 783 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Chaf1bQ9D0N7 Hebp1-201ENSMUST00000045855 1058 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Chaf1bQ9D0N7 Gm26803-201ENSMUST00000181705 2011 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Chaf1bQ9D0N7 Gm26774-201ENSMUST00000181534 2401 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Chaf1bQ9D0N7 Gm26580-201ENSMUST00000181002 2095 ntTSL 5 BASIC16.1■□□□□ 0.17
Chaf1bQ9D0N7 Pi4kb-202ENSMUST00000107251 2895 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Chaf1bQ9D0N7 Caml-201ENSMUST00000021963 1382 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Chaf1bQ9D0N7 Itgb7-201ENSMUST00000001327 2674 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Chaf1bQ9D0N7 Bcor-204ENSMUST00000115513 6941 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Chaf1bQ9D0N7 Kcnh2-202ENSMUST00000115098 3193 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Chaf1bQ9D0N7 Arid4b-204ENSMUST00000110536 5783 ntTSL 5 BASIC16.09■□□□□ 0.17
Chaf1bQ9D0N7 Zfp281-201ENSMUST00000047734 4933 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Chaf1bQ9D0N7 Mycs-201ENSMUST00000058404 2368 ntAPPRIS P1 BASIC16.09■□□□□ 0.17
Chaf1bQ9D0N7 Shh-201ENSMUST00000002708 2847 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Chaf1bQ9D0N7 Msl1-201ENSMUST00000037915 4593 ntAPPRIS P2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Chaf1bQ9D0N7 Efnb3-201ENSMUST00000004036 3183 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Chaf1bQ9D0N7 Tmem54-203ENSMUST00000106064 1066 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
Chaf1bQ9D0N7 E130307A14Rik-208ENSMUST00000145971 830 ntTSL 3 BASIC16.09■□□□□ 0.17
Chaf1bQ9D0N7 1700012B09Rik-204ENSMUST00000191047 654 ntAPPRIS ALT2 TSL 3 BASIC16.09■□□□□ 0.17
Chaf1bQ9D0N7 Ccdc84-211ENSMUST00000217270 681 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Chaf1bQ9D0N7 Gnb5-201ENSMUST00000076889 1188 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Chaf1bQ9D0N7 Gm27029-201ENSMUST00000107257 1898 ntAPPRIS ALT2 TSL 5 BASIC16.09■□□□□ 0.17
Chaf1bQ9D0N7 Wdr20-205ENSMUST00000193053 1351 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Chaf1bQ9D0N7 A930003O13Rik-203ENSMUST00000199056 1955 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Chaf1bQ9D0N7 BC030336-201ENSMUST00000060175 4831 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Retrieved 100 of 76,532 protein–RNA pairs in 22.2 ms