Protein–RNA interactions for Protein: Q9D0E3

Lysmd1, LysM and putative peptidoglycan-binding domain-containing protein 1, mousemouse

Predictions only

Length 226 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lysmd1Q9D0E3 Mt3-201ENSMUST00000034211 536 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Lysmd1Q9D0E3 Spsb2-201ENSMUST00000047760 1213 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Lysmd1Q9D0E3 Chchd10-201ENSMUST00000058906 939 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Lysmd1Q9D0E3 Cav3-201ENSMUST00000075477 1157 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Lysmd1Q9D0E3 Hist1h2ah-201ENSMUST00000091742 405 ntAPPRIS P1 BASIC18.32■□□□□ 0.52
Lysmd1Q9D0E3 Man1a-203ENSMUST00000105470 2847 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
Lysmd1Q9D0E3 Inpp5a-201ENSMUST00000026550 2774 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Lysmd1Q9D0E3 Tfap4-201ENSMUST00000005862 2113 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Lysmd1Q9D0E3 Atxn7l2-202ENSMUST00000117409 2321 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
Lysmd1Q9D0E3 Tekt1-202ENSMUST00000108502 1403 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Lysmd1Q9D0E3 Dnase2a-202ENSMUST00000109744 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Lysmd1Q9D0E3 Baiap2-203ENSMUST00000103021 3398 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Lysmd1Q9D0E3 Brd1-203ENSMUST00000109381 4886 ntTSL 5 BASIC18.31■□□□□ 0.52
Lysmd1Q9D0E3 Tmub1-201ENSMUST00000030799 1333 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Lysmd1Q9D0E3 Bfsp1-201ENSMUST00000028907 2372 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
Lysmd1Q9D0E3 Taf4-201ENSMUST00000041618 4416 ntAPPRIS P2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Lysmd1Q9D0E3 Gm3667-201ENSMUST00000171906 2053 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
Lysmd1Q9D0E3 1700008O03Rik-201ENSMUST00000107933 913 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Lysmd1Q9D0E3 Pcp2-204ENSMUST00000136105 504 ntAPPRIS P4 TSL 1 (best) BASIC18.31■□□□□ 0.52
Lysmd1Q9D0E3 Gm14493-201ENSMUST00000141174 543 ntTSL 5 BASIC18.31■□□□□ 0.52
Lysmd1Q9D0E3 Gm15825-201ENSMUST00000159108 918 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Lysmd1Q9D0E3 Gm29246-201ENSMUST00000189221 349 ntTSL 3 BASIC18.31■□□□□ 0.52
Lysmd1Q9D0E3 Rapgef1-201ENSMUST00000091146 6212 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Lysmd1Q9D0E3 Gm15853-202ENSMUST00000195518 2041 ntBASIC18.3■□□□□ 0.52
Lysmd1Q9D0E3 4930560O18Rik-201ENSMUST00000207051 1595 ntBASIC18.3■□□□□ 0.52
Lysmd1Q9D0E3 Cdca4-201ENSMUST00000062092 2425 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Lysmd1Q9D0E3 Frat1-201ENSMUST00000087155 2614 ntAPPRIS P1 BASIC18.3■□□□□ 0.52
Lysmd1Q9D0E3 Nudt3-201ENSMUST00000025050 2193 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Lysmd1Q9D0E3 Coq10b-201ENSMUST00000027125 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Lysmd1Q9D0E3 Gm12428-201ENSMUST00000119844 727 ntBASIC18.3■□□□□ 0.52
Lysmd1Q9D0E3 9530003J23Rik-202ENSMUST00000159193 1033 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Lysmd1Q9D0E3 Pmf1-205ENSMUST00000193338 795 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Lysmd1Q9D0E3 Gm38708-201ENSMUST00000203855 677 ntTSL 5 BASIC18.3■□□□□ 0.52
Lysmd1Q9D0E3 Olfr1232-201ENSMUST00000099785 936 ntAPPRIS P1 BASIC18.3■□□□□ 0.52
Lysmd1Q9D0E3 Col23a1-201ENSMUST00000102765 5658 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
Lysmd1Q9D0E3 Tspan10-201ENSMUST00000044105 1680 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Lysmd1Q9D0E3 Nfe2-201ENSMUST00000075192 1697 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Lysmd1Q9D0E3 Cdc27-202ENSMUST00000106961 1863 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Lysmd1Q9D0E3 Ddhd2-206ENSMUST00000211688 2265 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Lysmd1Q9D0E3 Farsa-201ENSMUST00000003906 1826 ntAPPRIS P2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Lysmd1Q9D0E3 Tubb6-201ENSMUST00000001513 1757 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Lysmd1Q9D0E3 Nisch-221ENSMUST00000171735 1763 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Lysmd1Q9D0E3 Mcmbp-202ENSMUST00000119081 2347 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Lysmd1Q9D0E3 Wisp2-201ENSMUST00000029188 1719 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Lysmd1Q9D0E3 Rufy1-201ENSMUST00000020643 2688 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Lysmd1Q9D0E3 Gm26634-201ENSMUST00000181146 1511 ntTSL 5 BASIC18.29■□□□□ 0.52
Lysmd1Q9D0E3 Mrpl15-203ENSMUST00000130201 1894 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Lysmd1Q9D0E3 Isoc2a-201ENSMUST00000125249 2244 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Lysmd1Q9D0E3 Lhx6-208ENSMUST00000148852 1481 ntTSL 5 BASIC18.29■□□□□ 0.52
Lysmd1Q9D0E3 Ascl4-202ENSMUST00000170396 2016 ntAPPRIS P1 BASIC18.29■□□□□ 0.52
Lysmd1Q9D0E3 Pbx1-206ENSMUST00000176790 1828 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Lysmd1Q9D0E3 Gm13186-201ENSMUST00000118031 316 ntBASIC18.29■□□□□ 0.52
Lysmd1Q9D0E3 Pgam1-ps1-201ENSMUST00000119107 749 ntBASIC18.29■□□□□ 0.52
Lysmd1Q9D0E3 Vdac2-209ENSMUST00000173456 956 ntAPPRIS ALT2 TSL 5 BASIC18.29■□□□□ 0.52
Lysmd1Q9D0E3 Mir6977-201ENSMUST00000184960 64 ntBASIC18.29■□□□□ 0.52
Lysmd1Q9D0E3 1810008I18Rik-202ENSMUST00000187848 819 ntTSL 3 BASIC18.29■□□□□ 0.52
Lysmd1Q9D0E3 AC131187.1-201ENSMUST00000224567 809 ntBASIC18.29■□□□□ 0.52
Lysmd1Q9D0E3 Med8-203ENSMUST00000084319 1134 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Lysmd1Q9D0E3 Phf7-203ENSMUST00000226565 1971 ntBASIC18.29■□□□□ 0.52
Lysmd1Q9D0E3 Gm9194-201ENSMUST00000220749 1447 ntBASIC18.29■□□□□ 0.52
Lysmd1Q9D0E3 Hoxc13-201ENSMUST00000001700 2461 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Lysmd1Q9D0E3 Gm10505-201ENSMUST00000151398 1587 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Lysmd1Q9D0E3 Ccdc105-201ENSMUST00000105383 1714 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Lysmd1Q9D0E3 Syne4-201ENSMUST00000054594 1355 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
Lysmd1Q9D0E3 CT010456.1-201ENSMUST00000222465 1688 ntTSL 5 BASIC18.28■□□□□ 0.52
Lysmd1Q9D0E3 Cdc123-201ENSMUST00000043864 1827 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Lysmd1Q9D0E3 Lpar3-201ENSMUST00000039164 2464 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Lysmd1Q9D0E3 Ghitm-201ENSMUST00000042564 2573 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Lysmd1Q9D0E3 Cep250-203ENSMUST00000109618 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Lysmd1Q9D0E3 Id1-202ENSMUST00000109824 1160 ntAPPRIS ALT2 BASIC18.28■□□□□ 0.52
Lysmd1Q9D0E3 Fam107b-203ENSMUST00000115053 688 ntAPPRIS P1 TSL 3 BASIC18.28■□□□□ 0.52
Lysmd1Q9D0E3 Gm7222-201ENSMUST00000117512 906 ntBASIC18.28■□□□□ 0.52
Lysmd1Q9D0E3 Rpl36-ps8-201ENSMUST00000121187 315 ntBASIC18.28■□□□□ 0.52
Lysmd1Q9D0E3 Gm16151-201ENSMUST00000129696 639 ntTSL 3 BASIC18.28■□□□□ 0.52
Lysmd1Q9D0E3 Tmem176a-202ENSMUST00000168406 1086 ntAPPRIS P1 TSL 3 BASIC18.28■□□□□ 0.52
Lysmd1Q9D0E3 Oaz1-203ENSMUST00000179172 744 ntTSL 5 BASIC18.28■□□□□ 0.52
Lysmd1Q9D0E3 Oaz1-ps-201ENSMUST00000052440 681 ntBASIC18.28■□□□□ 0.52
Lysmd1Q9D0E3 Erp29-201ENSMUST00000052590 1123 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Lysmd1Q9D0E3 Hcrt-201ENSMUST00000055083 586 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Lysmd1Q9D0E3 Rnf7-202ENSMUST00000071301 334 ntTSL 2 BASIC18.28■□□□□ 0.52
Lysmd1Q9D0E3 Gm11937-201ENSMUST00000076478 396 ntAPPRIS P1 BASIC18.28■□□□□ 0.52
Lysmd1Q9D0E3 Gm14261-201ENSMUST00000145105 1429 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Lysmd1Q9D0E3 Atp5c1-202ENSMUST00000114896 1735 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Lysmd1Q9D0E3 1700028E10Rik-201ENSMUST00000181114 2034 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Lysmd1Q9D0E3 Homer1-207ENSMUST00000109494 2468 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Lysmd1Q9D0E3 Nap1l1-206ENSMUST00000219143 1365 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Lysmd1Q9D0E3 Prmt2-202ENSMUST00000099571 2052 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.52
Lysmd1Q9D0E3 Gm26694-201ENSMUST00000180868 1902 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Lysmd1Q9D0E3 Acads-201ENSMUST00000031524 1870 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Lysmd1Q9D0E3 Raph1-202ENSMUST00000090293 2409 ntAPPRIS ALT2 TSL 5 BASIC18.27■□□□□ 0.52
Lysmd1Q9D0E3 Snx3-202ENSMUST00000105499 1057 ntTSL 5 BASIC18.27■□□□□ 0.52
Lysmd1Q9D0E3 Cpt2-203ENSMUST00000106720 1015 ntTSL 2 BASIC18.27■□□□□ 0.52
Lysmd1Q9D0E3 Gm13823-201ENSMUST00000119930 345 ntBASIC18.27■□□□□ 0.52
Lysmd1Q9D0E3 Tmem208-201ENSMUST00000015000 785 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Lysmd1Q9D0E3 Gpx4-207ENSMUST00000183037 735 ntTSL 2 BASIC18.27■□□□□ 0.52
Lysmd1Q9D0E3 Gm7229-201ENSMUST00000214719 1007 ntBASIC18.27■□□□□ 0.52
Lysmd1Q9D0E3 Mal2-201ENSMUST00000025356 2950 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Lysmd1Q9D0E3 Tspan18-201ENSMUST00000028646 1203 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Lysmd1Q9D0E3 Med29-201ENSMUST00000003536 1281 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Lysmd1Q9D0E3 Kcnc3-201ENSMUST00000107906 5062 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
Retrieved 100 of 76,532 protein–RNA pairs in 22 ms