Protein–RNA interactions for Protein: Q9CQX5

Cldnd1, Claudin domain-containing protein 1, mousemouse

Predictions only

Length 253 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cldnd1Q9CQX5 Phf7-203ENSMUST00000226565 1971 ntBASIC17.5■□□□□ 0.39
Cldnd1Q9CQX5 Gm7862-201ENSMUST00000121461 292 ntBASIC17.5■□□□□ 0.39
Cldnd1Q9CQX5 A230065H16Rik-201ENSMUST00000150384 670 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Cldnd1Q9CQX5 Gm20675-201ENSMUST00000175861 338 ntTSL 3 BASIC17.5■□□□□ 0.39
Cldnd1Q9CQX5 4930477E14Rik-201ENSMUST00000181412 621 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Cldnd1Q9CQX5 Bvht-202ENSMUST00000183087 588 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Cldnd1Q9CQX5 Gm27217-201ENSMUST00000183438 882 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Cldnd1Q9CQX5 Gm8000-201ENSMUST00000188378 592 ntBASIC17.5■□□□□ 0.39
Cldnd1Q9CQX5 Gm2213-201ENSMUST00000197485 688 ntBASIC17.5■□□□□ 0.39
Cldnd1Q9CQX5 Lrrc75b-201ENSMUST00000051129 4601 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Cldnd1Q9CQX5 Mmd-202ENSMUST00000107887 1654 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Cldnd1Q9CQX5 Ppan-201ENSMUST00000004203 1670 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Cldnd1Q9CQX5 Lrrfip1-201ENSMUST00000068116 2050 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
Cldnd1Q9CQX5 Fndc4-202ENSMUST00000172435 2333 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Cldnd1Q9CQX5 Zfp24-203ENSMUST00000153337 1513 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Cldnd1Q9CQX5 Mbd6-202ENSMUST00000119078 4287 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Cldnd1Q9CQX5 Shox2-201ENSMUST00000029422 3079 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Cldnd1Q9CQX5 Atrnl1-201ENSMUST00000077282 6581 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Cldnd1Q9CQX5 Blcap-201ENSMUST00000088494 2108 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Cldnd1Q9CQX5 Ppp1r3g-203ENSMUST00000225537 2389 ntAPPRIS P1 BASIC17.5■□□□□ 0.39
Cldnd1Q9CQX5 Zdhhc14-201ENSMUST00000089185 3115 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Cldnd1Q9CQX5 6330411D24Rik-201ENSMUST00000211105 1568 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Cldnd1Q9CQX5 Wtap-204ENSMUST00000159986 3187 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Cldnd1Q9CQX5 Sephs1-202ENSMUST00000115019 2933 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Cldnd1Q9CQX5 Phox2b-201ENSMUST00000012664 3013 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Cldnd1Q9CQX5 Nisch-221ENSMUST00000171735 1763 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Cldnd1Q9CQX5 Sh2b3-203ENSMUST00000118580 2393 ntAPPRIS ALT2 TSL 2 BASIC17.49■□□□□ 0.39
Cldnd1Q9CQX5 Dguok-202ENSMUST00000113888 1007 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Cldnd1Q9CQX5 Chchd2-ps-201ENSMUST00000117487 462 ntBASIC17.49■□□□□ 0.39
Cldnd1Q9CQX5 Gm15295-201ENSMUST00000139874 488 ntTSL 5 BASIC17.49■□□□□ 0.39
Cldnd1Q9CQX5 Prss45-202ENSMUST00000146794 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Cldnd1Q9CQX5 Dguok-201ENSMUST00000014698 1107 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Cldnd1Q9CQX5 Apopt1-204ENSMUST00000163220 671 ntAPPRIS ALT2 TSL 2 BASIC17.49■□□□□ 0.39
Cldnd1Q9CQX5 AC153794.1-201ENSMUST00000169148 126 ntBASIC17.49■□□□□ 0.39
Cldnd1Q9CQX5 Sardhos-201ENSMUST00000170435 265 ntTSL 3 BASIC17.49■□□□□ 0.39
Cldnd1Q9CQX5 Spata33-204ENSMUST00000212346 715 ntTSL 2 BASIC17.49■□□□□ 0.39
Cldnd1Q9CQX5 Gm6296-201ENSMUST00000222599 943 ntBASIC17.49■□□□□ 0.39
Cldnd1Q9CQX5 Ube2f-201ENSMUST00000059743 1154 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Cldnd1Q9CQX5 Eif5a-203ENSMUST00000071026 1286 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Cldnd1Q9CQX5 Acads-201ENSMUST00000031524 1870 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Cldnd1Q9CQX5 Myo1b-203ENSMUST00000114537 4618 ntTSL 5 BASIC17.49■□□□□ 0.39
Cldnd1Q9CQX5 Psme3-201ENSMUST00000019470 2664 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Cldnd1Q9CQX5 Mcfd2-201ENSMUST00000024963 1823 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Cldnd1Q9CQX5 Fst-202ENSMUST00000223640 2612 ntBASIC17.49■□□□□ 0.39
Cldnd1Q9CQX5 Lrrc27-202ENSMUST00000106104 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Cldnd1Q9CQX5 Iqck-201ENSMUST00000098087 1503 ntAPPRIS ALT2 TSL 5 BASIC17.48■□□□□ 0.39
Cldnd1Q9CQX5 Ahcyl1-201ENSMUST00000029490 3863 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Cldnd1Q9CQX5 Nfkbib-201ENSMUST00000032815 2061 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Cldnd1Q9CQX5 Commd6-201ENSMUST00000100339 1090 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
Cldnd1Q9CQX5 Cldn7-203ENSMUST00000108596 664 ntTSL 3 BASIC17.48■□□□□ 0.39
Cldnd1Q9CQX5 Mpc1-205ENSMUST00000142594 961 ntTSL 5 BASIC17.48■□□□□ 0.39
Cldnd1Q9CQX5 Rprl3-201ENSMUST00000157400 290 ntBASIC17.48■□□□□ 0.39
Cldnd1Q9CQX5 Gm20324-201ENSMUST00000186291 1118 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Cldnd1Q9CQX5 Npcd-201ENSMUST00000023060 1162 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Cldnd1Q9CQX5 Hnrnph3-201ENSMUST00000020263 2213 ntAPPRIS P3 TSL 5 BASIC17.48■□□□□ 0.39
Cldnd1Q9CQX5 Cbfb-202ENSMUST00000109392 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Cldnd1Q9CQX5 Amigo1-202ENSMUST00000106656 5482 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Cldnd1Q9CQX5 Ak2-202ENSMUST00000102604 1781 ntAPPRIS ALT1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Cldnd1Q9CQX5 Cdk4-201ENSMUST00000006911 2053 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Cldnd1Q9CQX5 Scrib-201ENSMUST00000002603 5599 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
Cldnd1Q9CQX5 Fbxo30-201ENSMUST00000070300 2492 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Cldnd1Q9CQX5 Ndufv2-203ENSMUST00000143987 1540 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Cldnd1Q9CQX5 Pou3f1-201ENSMUST00000053491 3849 ntAPPRIS P1 BASIC17.47■□□□□ 0.39
Cldnd1Q9CQX5 Acvrl1-203ENSMUST00000119063 1818 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Cldnd1Q9CQX5 Gramd1a-201ENSMUST00000001280 2713 ntAPPRIS P2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Cldnd1Q9CQX5 Trmt112-ps2-201ENSMUST00000117987 378 ntBASIC17.47■□□□□ 0.39
Cldnd1Q9CQX5 AC160338.1-201ENSMUST00000214232 705 ntBASIC17.47■□□□□ 0.39
Cldnd1Q9CQX5 Sec61b-201ENSMUST00000065678 564 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Cldnd1Q9CQX5 Prdm5-201ENSMUST00000031973 1488 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Cldnd1Q9CQX5 Chmp6-201ENSMUST00000026434 1557 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Cldnd1Q9CQX5 Gpr84-201ENSMUST00000079824 1550 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Cldnd1Q9CQX5 Irf5-205ENSMUST00000167252 1693 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Cldnd1Q9CQX5 C630004M23Rik-201ENSMUST00000194765 1682 ntBASIC17.47■□□□□ 0.39
Cldnd1Q9CQX5 Fhl3-201ENSMUST00000038684 1664 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Cldnd1Q9CQX5 Unc13a-208ENSMUST00000177517 5654 ntAPPRIS ALT2 TSL 5 BASIC17.47■□□□□ 0.39
Cldnd1Q9CQX5 Asap2-202ENSMUST00000064595 5678 ntAPPRIS P4 TSL 5 BASIC17.47■□□□□ 0.39
Cldnd1Q9CQX5 Gm26892-201ENSMUST00000181695 1636 ntTSL 5 BASIC17.47■□□□□ 0.39
Cldnd1Q9CQX5 Ppp2r1b-205ENSMUST00000175640 1523 ntTSL 5 BASIC17.47■□□□□ 0.39
Cldnd1Q9CQX5 Dtx3-202ENSMUST00000116229 1994 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Cldnd1Q9CQX5 Trim63-202ENSMUST00000105875 1886 ntAPPRIS P2 TSL 5 BASIC17.46■□□□□ 0.39
Cldnd1Q9CQX5 Tagln-201ENSMUST00000034590 1595 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Cldnd1Q9CQX5 Vegfc-201ENSMUST00000033919 2449 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Cldnd1Q9CQX5 Sirpa-213ENSMUST00000163034 677 ntTSL 3 BASIC17.46■□□□□ 0.39
Cldnd1Q9CQX5 Syngr2-206ENSMUST00000177131 935 ntAPPRIS ALT2 TSL 3 BASIC17.46■□□□□ 0.39
Cldnd1Q9CQX5 Gm38186-201ENSMUST00000192574 449 ntTSL 3 BASIC17.46■□□□□ 0.39
Cldnd1Q9CQX5 Tdrkh-208ENSMUST00000200486 1231 ntTSL 3 BASIC17.46■□□□□ 0.39
Cldnd1Q9CQX5 Gm44202-201ENSMUST00000203549 532 ntTSL 3 BASIC17.46■□□□□ 0.39
Cldnd1Q9CQX5 Prm1-201ENSMUST00000023144 469 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Cldnd1Q9CQX5 Thrsp-201ENSMUST00000043077 1277 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Cldnd1Q9CQX5 Nudt3-201ENSMUST00000025050 2193 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Cldnd1Q9CQX5 Mgat1-213ENSMUST00000167400 3151 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
Cldnd1Q9CQX5 Acbd4-203ENSMUST00000107040 1959 ntTSL 2 BASIC17.46■□□□□ 0.39
Cldnd1Q9CQX5 Cldn7-201ENSMUST00000018713 1335 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.38
Cldnd1Q9CQX5 Ghrhr-201ENSMUST00000063578 1550 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Cldnd1Q9CQX5 Platr31-201ENSMUST00000180653 1466 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Cldnd1Q9CQX5 Ccdc50-201ENSMUST00000039443 2192 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Cldnd1Q9CQX5 Eif6-202ENSMUST00000109638 1382 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Cldnd1Q9CQX5 Tmem116-203ENSMUST00000094357 1366 ntAPPRIS ALT2 TSL 5 BASIC17.45■□□□□ 0.38
Cldnd1Q9CQX5 Ndufb6-202ENSMUST00000108108 480 ntTSL 3 BASIC17.45■□□□□ 0.38
Cldnd1Q9CQX5 Olfr1564-201ENSMUST00000112162 1091 ntAPPRIS P2 BASIC17.45■□□□□ 0.38
Retrieved 100 of 76,532 protein–RNA pairs in 37.3 ms