Protein–RNA interactions for Protein: Q9CQE8

RTRAF, RNA transcription, translation and transport factor protein, mousemouse

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTRAFQ9CQE8 A230050P20Rik-201ENSMUST00000043911 1683 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
RTRAFQ9CQE8 Osbpl1a-208ENSMUST00000121888 2674 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
RTRAFQ9CQE8 Mettl21a-201ENSMUST00000053469 2666 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
RTRAFQ9CQE8 Agbl5-208ENSMUST00000201168 3199 ntAPPRIS ALT2 TSL 5 BASIC13.97□□□□□ -0.17
RTRAFQ9CQE8 Magi1-208ENSMUST00000204347 7929 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
RTRAFQ9CQE8 Il23a-201ENSMUST00000026449 1360 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
RTRAFQ9CQE8 Ubp1-202ENSMUST00000084885 3850 ntAPPRIS P4 TSL 5 BASIC13.97□□□□□ -0.17
RTRAFQ9CQE8 Sema6c-214ENSMUST00000202315 2843 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
RTRAFQ9CQE8 Dancr-204ENSMUST00000132389 2347 ntBASIC13.97□□□□□ -0.17
RTRAFQ9CQE8 Prpsap1-201ENSMUST00000106391 1841 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
RTRAFQ9CQE8 Gm10649-203ENSMUST00000148066 1812 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
RTRAFQ9CQE8 Zdhhc16-201ENSMUST00000026154 1821 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
RTRAFQ9CQE8 AC165249.1-201ENSMUST00000220031 1599 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
RTRAFQ9CQE8 Xpo6-201ENSMUST00000009344 4455 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
RTRAFQ9CQE8 Zfp651-201ENSMUST00000093772 6353 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
RTRAFQ9CQE8 Grm4-201ENSMUST00000118161 4537 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
RTRAFQ9CQE8 1700064M15Rik-201ENSMUST00000185726 645 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
RTRAFQ9CQE8 Gm38205-201ENSMUST00000192243 258 ntBASIC13.97□□□□□ -0.17
RTRAFQ9CQE8 Smco4-203ENSMUST00000215907 994 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
RTRAFQ9CQE8 Sap18b-201ENSMUST00000074053 789 ntAPPRIS P1 BASIC13.97□□□□□ -0.17
RTRAFQ9CQE8 Pstk-201ENSMUST00000075610 1135 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
RTRAFQ9CQE8 Gm4425-201ENSMUST00000172838 2857 ntTSL 2 BASIC13.97□□□□□ -0.17
RTRAFQ9CQE8 Mrpl57-201ENSMUST00000022538 2877 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
RTRAFQ9CQE8 Umad1-202ENSMUST00000159335 2615 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
RTRAFQ9CQE8 Gpr137b-ps-203ENSMUST00000220758 1942 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
RTRAFQ9CQE8 Rbpms-201ENSMUST00000033994 2375 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
RTRAFQ9CQE8 Gpr150-201ENSMUST00000056130 2146 ntAPPRIS P1 BASIC13.97□□□□□ -0.17
RTRAFQ9CQE8 Pick1-206ENSMUST00000166155 1699 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
RTRAFQ9CQE8 Tbp-202ENSMUST00000117593 2067 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
RTRAFQ9CQE8 Ranbp9-201ENSMUST00000144326 3371 ntAPPRIS P2 TSL 5 BASIC13.97□□□□□ -0.17
RTRAFQ9CQE8 Espn-205ENSMUST00000084114 1645 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
RTRAFQ9CQE8 Col7a1-202ENSMUST00000112070 9250 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
RTRAFQ9CQE8 Aatk-202ENSMUST00000103019 5177 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.17
RTRAFQ9CQE8 Rab35-201ENSMUST00000031492 2820 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
RTRAFQ9CQE8 Ptprn-201ENSMUST00000027404 3554 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
RTRAFQ9CQE8 Zfp691-201ENSMUST00000052715 2341 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
RTRAFQ9CQE8 Adam9-204ENSMUST00000208247 4044 ntAPPRIS P2 TSL 1 (best) BASIC13.96□□□□□ -0.17
RTRAFQ9CQE8 Tarbp2-202ENSMUST00000100168 1278 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
RTRAFQ9CQE8 Tmed5-204ENSMUST00000118036 1045 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
RTRAFQ9CQE8 Srp19-202ENSMUST00000119329 613 ntTSL 2 BASIC13.96□□□□□ -0.17
RTRAFQ9CQE8 H3f3a-207ENSMUST00000162814 724 ntAPPRIS P2 TSL 3 BASIC13.96□□□□□ -0.17
RTRAFQ9CQE8 Stum-202ENSMUST00000179826 601 ntAPPRIS ALT1 TSL 5 BASIC13.96□□□□□ -0.17
RTRAFQ9CQE8 Abhd5-204ENSMUST00000156520 3157 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
RTRAFQ9CQE8 Dbn1-202ENSMUST00000109921 2378 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.18
RTRAFQ9CQE8 M5C1000I18Rik-202ENSMUST00000186205 1414 ntTSL 1 (best) BASIC13.96□□□□□ -0.18
RTRAFQ9CQE8 Stx1a-201ENSMUST00000005509 2162 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
RTRAFQ9CQE8 Ccnyl1-202ENSMUST00000114077 3281 ntTSL 1 (best) BASIC13.96□□□□□ -0.18
RTRAFQ9CQE8 Ddhd1-202ENSMUST00000087320 9820 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.18
RTRAFQ9CQE8 Dtx2-203ENSMUST00000111144 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.18
RTRAFQ9CQE8 Pigs-201ENSMUST00000048073 2501 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
RTRAFQ9CQE8 Acaa1a-201ENSMUST00000039784 1762 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
RTRAFQ9CQE8 Rnf150-201ENSMUST00000078525 9682 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
RTRAFQ9CQE8 Smox-209ENSMUST00000110189 1919 ntTSL 1 (best) BASIC13.96□□□□□ -0.18
RTRAFQ9CQE8 Prdm11-201ENSMUST00000111272 3012 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.18
RTRAFQ9CQE8 Lhfp-203ENSMUST00000147139 1932 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.18
RTRAFQ9CQE8 Foxj3-209ENSMUST00000162267 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.18
RTRAFQ9CQE8 AC161052.2-201ENSMUST00000220969 1375 ntTSL 5 BASIC13.96□□□□□ -0.18
RTRAFQ9CQE8 AL591207.1-203ENSMUST00000222401 1380 ntTSL 5 BASIC13.96□□□□□ -0.18
RTRAFQ9CQE8 Prkar2b-202ENSMUST00000036497 3378 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
RTRAFQ9CQE8 Rnf152-201ENSMUST00000058688 8492 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
RTRAFQ9CQE8 Mios-201ENSMUST00000040017 3710 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
RTRAFQ9CQE8 Dnajc6-205ENSMUST00000106933 5191 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
RTRAFQ9CQE8 Bcam-201ENSMUST00000003061 2429 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
RTRAFQ9CQE8 Camk2b-202ENSMUST00000019133 2223 ntTSL 5 BASIC13.95□□□□□ -0.18
RTRAFQ9CQE8 Nrbp1-207ENSMUST00000202576 2221 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
RTRAFQ9CQE8 Nrbp1-201ENSMUST00000031034 2203 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
RTRAFQ9CQE8 Zfyve19-201ENSMUST00000090174 2008 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
RTRAFQ9CQE8 Wnt1-201ENSMUST00000023734 2378 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
RTRAFQ9CQE8 Gpat3-203ENSMUST00000112887 3059 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
RTRAFQ9CQE8 Prss56-201ENSMUST00000044533 2180 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
RTRAFQ9CQE8 Gm13216-201ENSMUST00000117145 591 ntBASIC13.95□□□□□ -0.18
RTRAFQ9CQE8 Ankrd9-205ENSMUST00000142012 1226 ntAPPRIS ALT2 TSL 5 BASIC13.95□□□□□ -0.18
RTRAFQ9CQE8 Gas5-217ENSMUST00000161005 430 ntTSL 5 BASIC13.95□□□□□ -0.18
RTRAFQ9CQE8 Copz2-201ENSMUST00000018816 930 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
RTRAFQ9CQE8 Hyi-205ENSMUST00000194248 936 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
RTRAFQ9CQE8 Gm9847-201ENSMUST00000052528 599 ntBASIC13.95□□□□□ -0.18
RTRAFQ9CQE8 Usp35-202ENSMUST00000168435 3982 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
RTRAFQ9CQE8 Adam22-201ENSMUST00000046838 2773 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
RTRAFQ9CQE8 Gemin5-202ENSMUST00000102711 4919 ntAPPRIS ALT2 TSL 5 BASIC13.95□□□□□ -0.18
RTRAFQ9CQE8 Cnppd1-208ENSMUST00000190679 2062 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
RTRAFQ9CQE8 Dhx32-203ENSMUST00000106139 2233 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
RTRAFQ9CQE8 Klf5-201ENSMUST00000005279 3352 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
RTRAFQ9CQE8 Capzb-203ENSMUST00000102507 1702 ntAPPRIS P4 TSL 1 (best) BASIC13.95□□□□□ -0.18
RTRAFQ9CQE8 Fam184a-201ENSMUST00000020003 4164 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
RTRAFQ9CQE8 Mmd-201ENSMUST00000004050 2677 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
RTRAFQ9CQE8 Ccnl1-201ENSMUST00000029416 2169 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
RTRAFQ9CQE8 Ormdl3-201ENSMUST00000052919 2184 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
RTRAFQ9CQE8 Luc7l2-213ENSMUST00000163047 3141 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
RTRAFQ9CQE8 Tle1-203ENSMUST00000074216 4369 ntAPPRIS ALT1 TSL 5 BASIC13.94□□□□□ -0.18
RTRAFQ9CQE8 CT010478.1-201ENSMUST00000220747 2787 ntBASIC13.94□□□□□ -0.18
RTRAFQ9CQE8 Hap1-201ENSMUST00000103124 2120 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
RTRAFQ9CQE8 Apba3-211ENSMUST00000220297 2268 ntAPPRIS P1 TSL 5 BASIC13.94□□□□□ -0.18
RTRAFQ9CQE8 Gnaz-201ENSMUST00000037813 3519 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
RTRAFQ9CQE8 Aptx-202ENSMUST00000068125 5383 ntAPPRIS P4 TSL 1 (best) BASIC13.94□□□□□ -0.18
RTRAFQ9CQE8 Ikbke-204ENSMUST00000161764 2867 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
RTRAFQ9CQE8 Rap1gap-202ENSMUST00000097837 3168 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
RTRAFQ9CQE8 Gm26580-201ENSMUST00000181002 2095 ntTSL 5 BASIC13.94□□□□□ -0.18
RTRAFQ9CQE8 Zfand6-208ENSMUST00000209117 2955 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
RTRAFQ9CQE8 Cgn-202ENSMUST00000107273 5016 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
RTRAFQ9CQE8 Elac2-203ENSMUST00000108697 2612 ntAPPRIS ALT2 TSL 5 BASIC13.94□□□□□ -0.18
Retrieved 100 of 76,532 protein–RNA pairs in 17.3 ms