Protein–RNA interactions for Protein: Q99P72

Rtn4, Reticulon-4, mousemouse

Known RBP Predictions only

Length 1,162 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rtn4Q99P72 Mrpl28-201ENSMUST00000025014 1048 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Rtn4Q99P72 Mrpl21-201ENSMUST00000025743 802 ntAPPRIS ALT2 TSL 1 (best) BASIC21.74■■□□□ 1.07
Rtn4Q99P72 Arl2-201ENSMUST00000025893 1144 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Rtn4Q99P72 Bcs1l-202ENSMUST00000113732 1679 ntAPPRIS P1 TSL 5 BASIC21.74■■□□□ 1.07
Rtn4Q99P72 Ppp2r1b-209ENSMUST00000176349 1890 ntAPPRIS ALT2 TSL 5 BASIC21.74■■□□□ 1.07
Rtn4Q99P72 Efcab11-201ENSMUST00000046485 2068 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Rtn4Q99P72 Kat14-208ENSMUST00000147747 3299 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
Rtn4Q99P72 Foxp4-204ENSMUST00000113265 3999 ntAPPRIS ALT2 TSL 1 (best) BASIC21.74■■□□□ 1.07
Rtn4Q99P72 Zfp697-202ENSMUST00000178372 4703 ntAPPRIS P1 TSL 5 BASIC21.74■■□□□ 1.07
Rtn4Q99P72 Man1c1-202ENSMUST00000054096 4715 ntAPPRIS P1 TSL 5 BASIC21.74■■□□□ 1.07
Rtn4Q99P72 Sec61a2-202ENSMUST00000102981 2448 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Rtn4Q99P72 Grip1-201ENSMUST00000041962 5343 ntAPPRIS ALT2 TSL 1 (best) BASIC21.73■■□□□ 1.07
Rtn4Q99P72 Prss16-204ENSMUST00000150547 1159 ntTSL 3 BASIC21.73■■□□□ 1.07
Rtn4Q99P72 Gm13816-201ENSMUST00000152230 715 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
Rtn4Q99P72 Gm20865-201ENSMUST00000179095 856 ntAPPRIS P1 BASIC21.73■■□□□ 1.07
Rtn4Q99P72 Gm38027-201ENSMUST00000192315 235 ntBASIC21.73■■□□□ 1.07
Rtn4Q99P72 Gm43353-201ENSMUST00000199224 1295 ntBASIC21.73■■□□□ 1.07
Rtn4Q99P72 Rnf112-202ENSMUST00000060255 3161 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
Rtn4Q99P72 Dhx30-224ENSMUST00000200066 4623 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Rtn4Q99P72 Samd4-211ENSMUST00000228404 3039 ntAPPRIS ALT2 BASIC21.73■■□□□ 1.07
Rtn4Q99P72 4930447C04Rik-201ENSMUST00000044000 2051 ntAPPRIS P2 TSL 1 (best) BASIC21.73■■□□□ 1.07
Rtn4Q99P72 1810013L24Rik-201ENSMUST00000023150 4066 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Rtn4Q99P72 Gm4779-203ENSMUST00000147742 1991 ntAPPRIS P1 TSL 5 BASIC21.72■■□□□ 1.07
Rtn4Q99P72 Nr1h2-201ENSMUST00000073488 1999 ntAPPRIS P3 TSL 1 (best) BASIC21.72■■□□□ 1.07
Rtn4Q99P72 Tmem80-201ENSMUST00000026578 1800 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Rtn4Q99P72 1810062O18Rik-202ENSMUST00000128848 745 ntTSL 3 BASIC21.72■■□□□ 1.07
Rtn4Q99P72 1700007L15Rik-201ENSMUST00000180923 737 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
Rtn4Q99P72 2010110E17Rik-201ENSMUST00000184161 879 ntBASIC21.72■■□□□ 1.07
Rtn4Q99P72 Gm28914-201ENSMUST00000188115 667 ntTSL 2 BASIC21.72■■□□□ 1.07
Rtn4Q99P72 Anapc13-203ENSMUST00000188398 727 ntAPPRIS P1 TSL 2 BASIC21.72■■□□□ 1.07
Rtn4Q99P72 Gm42477-201ENSMUST00000202427 469 ntTSL 3 BASIC21.72■■□□□ 1.07
Rtn4Q99P72 Fbxl15-201ENSMUST00000026256 1348 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Rtn4Q99P72 Tbc1d2b-202ENSMUST00000128874 3473 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
Rtn4Q99P72 Mboat7-201ENSMUST00000038608 2878 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Rtn4Q99P72 4933428P19Rik-201ENSMUST00000199616 1376 ntBASIC21.72■■□□□ 1.07
Rtn4Q99P72 Ptprt-201ENSMUST00000109441 6623 ntAPPRIS ALT2 TSL 1 (best) BASIC21.72■■□□□ 1.07
Rtn4Q99P72 Runx2-204ENSMUST00000159943 2316 ntAPPRIS P3 TSL 1 (best) BASIC21.72■■□□□ 1.07
Rtn4Q99P72 Sox30-201ENSMUST00000049038 2997 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Rtn4Q99P72 Lmtk2-201ENSMUST00000041804 8114 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Rtn4Q99P72 Mtch2-205ENSMUST00000136872 2596 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Rtn4Q99P72 Thsd7a-202ENSMUST00000119581 5678 ntAPPRIS P2 TSL 5 BASIC21.71■■□□□ 1.07
Rtn4Q99P72 1190002N15Rik-201ENSMUST00000113028 3950 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Rtn4Q99P72 Clk4-201ENSMUST00000093132 1949 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Rtn4Q99P72 Sdcbp-201ENSMUST00000029912 2745 ntAPPRIS ALT1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Rtn4Q99P72 Prickle4-201ENSMUST00000113299 990 ntTSL 5 BASIC21.71■■□□□ 1.07
Rtn4Q99P72 Prickle4-202ENSMUST00000113300 1110 ntAPPRIS P1 TSL 5 BASIC21.71■■□□□ 1.07
Rtn4Q99P72 Rpl21-202ENSMUST00000075453 899 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Rtn4Q99P72 Insm1-201ENSMUST00000089257 3100 ntAPPRIS P1 BASIC21.71■■□□□ 1.07
Rtn4Q99P72 Taf9-205ENSMUST00000190594 1962 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.07
Rtn4Q99P72 Prpf40b-212ENSMUST00000145482 3308 ntAPPRIS P2 TSL 1 (best) BASIC21.7■■□□□ 1.06
Rtn4Q99P72 Nrxn2-202ENSMUST00000113458 3503 ntTSL 5 BASIC21.7■■□□□ 1.06
Rtn4Q99P72 Inppl1-201ENSMUST00000035836 4995 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Rtn4Q99P72 3110043O21Rik-203ENSMUST00000108127 3193 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Rtn4Q99P72 A530084C06Rik-201ENSMUST00000170573 3200 ntAPPRIS P1 BASIC21.7■■□□□ 1.06
Rtn4Q99P72 Gm13401-201ENSMUST00000117074 291 ntBASIC21.7■■□□□ 1.06
Rtn4Q99P72 Ramp2-202ENSMUST00000122006 899 ntTSL 2 BASIC21.7■■□□□ 1.06
Rtn4Q99P72 Gm13563-202ENSMUST00000150375 851 ntTSL 3 BASIC21.7■■□□□ 1.06
Rtn4Q99P72 Snrnp48-202ENSMUST00000178564 847 ntTSL 5 BASIC21.7■■□□□ 1.06
Rtn4Q99P72 Gm37083-201ENSMUST00000195784 711 ntTSL 2 BASIC21.7■■□□□ 1.06
Rtn4Q99P72 Banf1-201ENSMUST00000025762 735 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Rtn4Q99P72 Paox-202ENSMUST00000097967 1024 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
Rtn4Q99P72 Farsa-201ENSMUST00000003906 1826 ntAPPRIS P2 TSL 1 (best) BASIC21.7■■□□□ 1.06
Rtn4Q99P72 Sft2d2-201ENSMUST00000043338 5535 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Rtn4Q99P72 Pink1-202ENSMUST00000105816 1465 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
Rtn4Q99P72 Pparg-202ENSMUST00000171644 2125 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Rtn4Q99P72 Ppm1d-201ENSMUST00000020835 2899 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Rtn4Q99P72 Phldb3-201ENSMUST00000073325 2273 ntAPPRIS P1 TSL 5 BASIC21.69■■□□□ 1.06
Rtn4Q99P72 Vegfa-201ENSMUST00000024747 2765 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
Rtn4Q99P72 Alcam-201ENSMUST00000023312 6036 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Rtn4Q99P72 Fez2-202ENSMUST00000112487 2020 ntAPPRIS ALT1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Rtn4Q99P72 0610040J01Rik-201ENSMUST00000081747 2008 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Rtn4Q99P72 Arhgap39-202ENSMUST00000077821 4494 ntAPPRIS P3 TSL 1 (best) BASIC21.69■■□□□ 1.06
Rtn4Q99P72 Ltbp4-202ENSMUST00000108369 5377 ntAPPRIS ALT2 TSL 5 BASIC21.69■■□□□ 1.06
Rtn4Q99P72 Plxdc1-202ENSMUST00000107564 619 ntTSL 2 BASIC21.69■■□□□ 1.06
Rtn4Q99P72 4933405E24Rik-201ENSMUST00000131019 1078 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
Rtn4Q99P72 Gm17182-201ENSMUST00000163795 860 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
Rtn4Q99P72 Krt88-201ENSMUST00000023781 903 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Rtn4Q99P72 Pih1d1-201ENSMUST00000085375 1185 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Rtn4Q99P72 Prss33-201ENSMUST00000059906 1360 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Rtn4Q99P72 Ctbp2-201ENSMUST00000033269 2321 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Rtn4Q99P72 Card10-202ENSMUST00000164826 4726 ntAPPRIS P2 TSL 1 (best) BASIC21.69■■□□□ 1.06
Rtn4Q99P72 Poglut1-201ENSMUST00000036210 2758 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Rtn4Q99P72 Galnt9-201ENSMUST00000040001 2883 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Rtn4Q99P72 AC163637.2-201ENSMUST00000213826 1945 ntAPPRIS P1 TSL 2 BASIC21.68■■□□□ 1.06
Rtn4Q99P72 Gm15558-201ENSMUST00000126849 2018 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
Rtn4Q99P72 Gna12-201ENSMUST00000000153 3416 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Rtn4Q99P72 Ccnd3-215ENSMUST00000183044 2064 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Rtn4Q99P72 Cdk5-201ENSMUST00000030814 2059 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Rtn4Q99P72 Bhlhe41-201ENSMUST00000032386 6133 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Rtn4Q99P72 Bpnt1-202ENSMUST00000110965 1046 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
Rtn4Q99P72 Nmnat3-203ENSMUST00000112938 848 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
Rtn4Q99P72 Tsfm-202ENSMUST00000120547 1271 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
Rtn4Q99P72 Gm3764-209ENSMUST00000181550 1093 ntTSL 3 BASIC21.68■■□□□ 1.06
Rtn4Q99P72 Npw-201ENSMUST00000095544 638 ntAPPRIS ALT2 TSL 1 (best) BASIC21.68■■□□□ 1.06
Rtn4Q99P72 0610012G03Rik-201ENSMUST00000202722 1445 ntAPPRIS P1 BASIC21.68■■□□□ 1.06
Rtn4Q99P72 4930426L09Rik-201ENSMUST00000028069 1459 ntAPPRIS P1 BASIC21.68■■□□□ 1.06
Rtn4Q99P72 Fcgrt-201ENSMUST00000003512 1770 ntAPPRIS P2 TSL 1 (best) BASIC21.68■■□□□ 1.06
Rtn4Q99P72 Gm7292-201ENSMUST00000194706 2527 ntBASIC21.68■■□□□ 1.06
Rtn4Q99P72 Por-202ENSMUST00000122113 2606 ntTSL 2 BASIC21.68■■□□□ 1.06
Rtn4Q99P72 9330160F10Rik-201ENSMUST00000101007 2766 ntBASIC21.68■■□□□ 1.06
Retrieved 100 of 76,532 protein–RNA pairs in 50.3 ms