Protein–RNA interactions for Protein: Q99MS8

Tpgs1, Tubulin polyglutamylase complex subunit 1, mousemouse

Predictions only

Length 303 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tpgs1Q99MS8 Skp1a-203ENSMUST00000109072 1754 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
Tpgs1Q99MS8 Zfpm1-201ENSMUST00000054052 3390 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Tpgs1Q99MS8 4930526A20Rik-201ENSMUST00000134228 941 ntBASIC17.81■□□□□ 0.44
Tpgs1Q99MS8 AC107711.5-202ENSMUST00000226429 702 ntBASIC17.81■□□□□ 0.44
Tpgs1Q99MS8 Epha10-201ENSMUST00000059343 2544 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Tpgs1Q99MS8 Hmgb3-202ENSMUST00000072699 1571 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Tpgs1Q99MS8 Ppp2r1b-204ENSMUST00000174628 2195 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Tpgs1Q99MS8 Fxr1-201ENSMUST00000001620 2459 ntTSL 5 BASIC17.81■□□□□ 0.44
Tpgs1Q99MS8 Anks6-202ENSMUST00000107747 3980 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Tpgs1Q99MS8 Frmd5-203ENSMUST00000121219 2262 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Tpgs1Q99MS8 Cep68-204ENSMUST00000162811 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Tpgs1Q99MS8 Gm7008-201ENSMUST00000038121 1366 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Tpgs1Q99MS8 Mafg-201ENSMUST00000058162 4923 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Tpgs1Q99MS8 Esrrb-201ENSMUST00000021680 2136 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
Tpgs1Q99MS8 4933402J07Rik-201ENSMUST00000093342 1304 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Tpgs1Q99MS8 Slbp-203ENSMUST00000101354 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Tpgs1Q99MS8 Atp5g1-202ENSMUST00000107684 596 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Tpgs1Q99MS8 Tnnt2-202ENSMUST00000112085 1076 ntAPPRIS ALT2 TSL 5 BASIC17.8■□□□□ 0.44
Tpgs1Q99MS8 Tnnt2-203ENSMUST00000112086 1094 ntAPPRIS ALT2 TSL 5 BASIC17.8■□□□□ 0.44
Tpgs1Q99MS8 Tnnt2-204ENSMUST00000112087 1112 ntAPPRIS ALT2 TSL 5 BASIC17.8■□□□□ 0.44
Tpgs1Q99MS8 4930405A21Rik-202ENSMUST00000139042 994 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Tpgs1Q99MS8 2210408F21Rik-208ENSMUST00000144612 450 ntTSL 3 BASIC17.8■□□□□ 0.44
Tpgs1Q99MS8 Tnnt2-206ENSMUST00000178854 1076 ntAPPRIS ALT2 TSL 5 BASIC17.8■□□□□ 0.44
Tpgs1Q99MS8 Spata25-201ENSMUST00000017911 786 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Tpgs1Q99MS8 Tnnt2-211ENSMUST00000189355 1112 ntAPPRIS ALT2 TSL 5 BASIC17.8■□□□□ 0.44
Tpgs1Q99MS8 Spata33-206ENSMUST00000212637 569 ntAPPRIS ALT2 TSL 2 BASIC17.8■□□□□ 0.44
Tpgs1Q99MS8 Gadd45b-203ENSMUST00000220246 732 ntTSL 2 BASIC17.8■□□□□ 0.44
Tpgs1Q99MS8 Irak1bp1-201ENSMUST00000034783 1159 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Tpgs1Q99MS8 Dnaja3-202ENSMUST00000115854 2505 ntAPPRIS ALT1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Tpgs1Q99MS8 Adat2-201ENSMUST00000019944 1466 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Tpgs1Q99MS8 Alg5-201ENSMUST00000044567 1471 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Tpgs1Q99MS8 Sort1-203ENSMUST00000135636 6836 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Tpgs1Q99MS8 Tox2-205ENSMUST00000165937 1675 ntAPPRIS P2 TSL 5 BASIC17.8■□□□□ 0.44
Tpgs1Q99MS8 Prob1-203ENSMUST00000190196 4888 ntAPPRIS P1 BASIC17.8■□□□□ 0.44
Tpgs1Q99MS8 Cldn4-201ENSMUST00000051401 1816 ntAPPRIS P1 BASIC17.79■□□□□ 0.44
Tpgs1Q99MS8 Glra1-201ENSMUST00000075603 2037 ntAPPRIS ALT1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Tpgs1Q99MS8 Elac2-202ENSMUST00000101049 2884 ntAPPRIS ALT2 TSL 5 BASIC17.79■□□□□ 0.44
Tpgs1Q99MS8 Prss56-201ENSMUST00000044533 2180 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Tpgs1Q99MS8 Bcap29-201ENSMUST00000020979 1949 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Tpgs1Q99MS8 Dnajb3-201ENSMUST00000119972 1051 ntAPPRIS P1 BASIC17.79■□□□□ 0.44
Tpgs1Q99MS8 AC134329.2-201ENSMUST00000217897 428 ntBASIC17.79■□□□□ 0.44
Tpgs1Q99MS8 Trim71-201ENSMUST00000111816 9332 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Tpgs1Q99MS8 Zfp644-204ENSMUST00000112696 5785 ntAPPRIS ALT2 TSL 5 BASIC17.79■□□□□ 0.44
Tpgs1Q99MS8 Sqstm1-201ENSMUST00000015981 2673 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Tpgs1Q99MS8 Foxa3-201ENSMUST00000036018 2037 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Tpgs1Q99MS8 Rgmb-201ENSMUST00000170578 2633 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Tpgs1Q99MS8 Krt27-201ENSMUST00000017732 1550 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Tpgs1Q99MS8 C130026I21Rik-201ENSMUST00000064341 1561 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
Tpgs1Q99MS8 Lins1-203ENSMUST00000121777 2729 ntAPPRIS P3 TSL 2 BASIC17.78■□□□□ 0.44
Tpgs1Q99MS8 Dnm1-216ENSMUST00000201494 2732 ntTSL 5 BASIC17.78■□□□□ 0.44
Tpgs1Q99MS8 Adcy2-201ENSMUST00000022013 4211 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Tpgs1Q99MS8 Spdef-205ENSMUST00000167489 1708 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
Tpgs1Q99MS8 Tmem198-201ENSMUST00000050899 2456 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Tpgs1Q99MS8 Crocc-202ENSMUST00000097816 6273 ntTSL 5 BASIC17.78■□□□□ 0.44
Tpgs1Q99MS8 Cldn7-201ENSMUST00000018713 1335 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Tpgs1Q99MS8 Acvr1c-204ENSMUST00000112608 1497 ntAPPRIS ALT2 TSL 5 BASIC17.78■□□□□ 0.44
Tpgs1Q99MS8 Gm26781-201ENSMUST00000181385 1477 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Tpgs1Q99MS8 Fam229a-201ENSMUST00000106043 558 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Tpgs1Q99MS8 Prickle4-201ENSMUST00000113299 990 ntTSL 5 BASIC17.78■□□□□ 0.44
Tpgs1Q99MS8 Prickle4-202ENSMUST00000113300 1110 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
Tpgs1Q99MS8 Tmem80-202ENSMUST00000126510 959 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
Tpgs1Q99MS8 Gm10231-201ENSMUST00000181584 441 ntBASIC17.78■□□□□ 0.44
Tpgs1Q99MS8 Atp5g2-202ENSMUST00000185641 731 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Tpgs1Q99MS8 Nsg1-204ENSMUST00000201363 820 ntAPPRIS P1 TSL 2 BASIC17.78■□□□□ 0.44
Tpgs1Q99MS8 Gm21057-201ENSMUST00000206022 670 ntTSL 3 BASIC17.78■□□□□ 0.44
Tpgs1Q99MS8 Gm10175-202ENSMUST00000208752 441 ntBASIC17.78■□□□□ 0.44
Tpgs1Q99MS8 Gm7213-201ENSMUST00000215977 950 ntBASIC17.78■□□□□ 0.44
Tpgs1Q99MS8 Banf1-201ENSMUST00000025762 735 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Tpgs1Q99MS8 Hoxa6-201ENSMUST00000062829 874 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Tpgs1Q99MS8 Atp5g2-201ENSMUST00000075630 441 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Tpgs1Q99MS8 Fam92a-201ENSMUST00000087052 1292 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Tpgs1Q99MS8 Tedc2-201ENSMUST00000024930 2166 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Tpgs1Q99MS8 Hsf4-202ENSMUST00000163734 1630 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Tpgs1Q99MS8 AL590614.2-201ENSMUST00000225374 1937 ntBASIC17.78■□□□□ 0.44
Tpgs1Q99MS8 C2cd4c-202ENSMUST00000178228 2761 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Tpgs1Q99MS8 Irak2-203ENSMUST00000089023 1734 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Tpgs1Q99MS8 Nsun5-201ENSMUST00000000940 2243 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Tpgs1Q99MS8 Actl10-201ENSMUST00000104928 1501 ntAPPRIS P1 BASIC17.77■□□□□ 0.44
Tpgs1Q99MS8 Actl10-202ENSMUST00000226583 1501 ntBASIC17.77■□□□□ 0.44
Tpgs1Q99MS8 Ecel1-201ENSMUST00000027463 2695 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Tpgs1Q99MS8 Tmem233-201ENSMUST00000111997 2477 ntAPPRIS P1 TSL 2 BASIC17.77■□□□□ 0.44
Tpgs1Q99MS8 Lpgat1-202ENSMUST00000110856 2792 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Tpgs1Q99MS8 Ppme1-201ENSMUST00000032963 2772 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Tpgs1Q99MS8 Dnaaf5-203ENSMUST00000196441 2426 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Tpgs1Q99MS8 Atp6v1c1-201ENSMUST00000022904 2071 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Tpgs1Q99MS8 Psmd13-209ENSMUST00000164681 726 ntTSL 5 BASIC17.77■□□□□ 0.44
Tpgs1Q99MS8 Cdc34-202ENSMUST00000166603 1078 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Tpgs1Q99MS8 Ccl27a-219ENSMUST00000173865 657 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Tpgs1Q99MS8 Mir7071-201ENSMUST00000184847 69 ntBASIC17.77■□□□□ 0.44
Tpgs1Q99MS8 4930579K19Rik-202ENSMUST00000190541 632 ntTSL 2 BASIC17.77■□□□□ 0.44
Tpgs1Q99MS8 Gm26709-202ENSMUST00000223049 819 ntTSL 5 BASIC17.77■□□□□ 0.44
Tpgs1Q99MS8 Med29-201ENSMUST00000003536 1281 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Tpgs1Q99MS8 Pih1d1-201ENSMUST00000085375 1185 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Tpgs1Q99MS8 Gzme-201ENSMUST00000089549 916 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Tpgs1Q99MS8 Gm10461-201ENSMUST00000202073 4786 ntBASIC17.77■□□□□ 0.44
Tpgs1Q99MS8 Tspan9-201ENSMUST00000032503 1405 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Tpgs1Q99MS8 Gpd1l-201ENSMUST00000084853 1436 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Tpgs1Q99MS8 Mapkapk3-201ENSMUST00000035194 2816 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Tpgs1Q99MS8 Cyr61-201ENSMUST00000029846 2019 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Tpgs1Q99MS8 Gm16759-201ENSMUST00000126238 1393 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
Retrieved 100 of 76,532 protein–RNA pairs in 49.4 ms