Protein–RNA interactions for Protein: Q99LU0

Chmp1b1, Charged multivesicular body protein 1b-1, mousemouse

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp1b1Q99LU0 Vhl-201ENSMUST00000035673 2792 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Chmp1b1Q99LU0 Naa60-212ENSMUST00000186375 2424 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Chmp1b1Q99LU0 Tmem81-201ENSMUST00000058167 1742 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Chmp1b1Q99LU0 Actr3-202ENSMUST00000178474 2565 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Chmp1b1Q99LU0 Snx15-201ENSMUST00000025702 1635 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Chmp1b1Q99LU0 Naa10-205ENSMUST00000114390 797 ntTSL 5 BASIC16.17■□□□□ 0.18
Chmp1b1Q99LU0 Zfp467-209ENSMUST00000114566 543 ntTSL 3 BASIC16.17■□□□□ 0.18
Chmp1b1Q99LU0 Gm15556-201ENSMUST00000122904 663 ntTSL 5 BASIC16.17■□□□□ 0.18
Chmp1b1Q99LU0 Serf1-204ENSMUST00000151821 570 ntTSL 2 BASIC16.17■□□□□ 0.18
Chmp1b1Q99LU0 Zfp428-203ENSMUST00000177205 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Chmp1b1Q99LU0 Gm3331-201ENSMUST00000183423 1017 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Chmp1b1Q99LU0 C430014B12Rik-202ENSMUST00000186858 657 ntTSL 2 BASIC16.17■□□□□ 0.18
Chmp1b1Q99LU0 Gm36736-201ENSMUST00000206060 646 ntTSL 3 BASIC16.17■□□□□ 0.18
Chmp1b1Q99LU0 Gm18025-201ENSMUST00000221733 862 ntBASIC16.17■□□□□ 0.18
Chmp1b1Q99LU0 Caln1-203ENSMUST00000111288 9327 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Chmp1b1Q99LU0 Ankdd1a-201ENSMUST00000061766 1443 ntAPPRIS ALT2 TSL 5 BASIC16.17■□□□□ 0.18
Chmp1b1Q99LU0 4930426D05Rik-202ENSMUST00000139804 1650 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Chmp1b1Q99LU0 Ispd-201ENSMUST00000062041 2690 ntAPPRIS P2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Chmp1b1Q99LU0 Anks1-201ENSMUST00000025058 6844 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Chmp1b1Q99LU0 Prcc-201ENSMUST00000005015 2099 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Chmp1b1Q99LU0 Matk-201ENSMUST00000105328 2228 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Chmp1b1Q99LU0 Mapk8ip3-208ENSMUST00000121787 5431 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Chmp1b1Q99LU0 Cblb-201ENSMUST00000114471 6648 ntAPPRIS P2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Chmp1b1Q99LU0 Mff-202ENSMUST00000078332 1894 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Chmp1b1Q99LU0 Mpig6b-201ENSMUST00000097337 2252 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Chmp1b1Q99LU0 Kdr-201ENSMUST00000113516 5924 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Chmp1b1Q99LU0 Ocel1-202ENSMUST00000110051 2179 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Chmp1b1Q99LU0 Yipf2-201ENSMUST00000034700 2174 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Chmp1b1Q99LU0 Ptch1-201ENSMUST00000021921 7725 ntAPPRIS P2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Chmp1b1Q99LU0 Ern1-203ENSMUST00000106800 654 ntTSL 3 BASIC16.16■□□□□ 0.18
Chmp1b1Q99LU0 Gm20635-201ENSMUST00000176473 1287 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Chmp1b1Q99LU0 Hrh3-202ENSMUST00000163215 1401 ntTSL 5 BASIC16.16■□□□□ 0.18
Chmp1b1Q99LU0 Cyth2-201ENSMUST00000056820 2527 ntAPPRIS ALT1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Chmp1b1Q99LU0 Nudt17-204ENSMUST00000200387 2108 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Chmp1b1Q99LU0 Stambp-206ENSMUST00000206400 2144 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Chmp1b1Q99LU0 9530080O11Rik-201ENSMUST00000137239 1475 ntTSL 2 BASIC16.16■□□□□ 0.18
Chmp1b1Q99LU0 Lpgat1-202ENSMUST00000110856 2792 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Chmp1b1Q99LU0 Ppp2r1b-205ENSMUST00000175640 1523 ntTSL 5 BASIC16.15■□□□□ 0.18
Chmp1b1Q99LU0 Fam171a2-201ENSMUST00000049057 3118 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Chmp1b1Q99LU0 Gpaa1-210ENSMUST00000172281 1809 ntTSL 5 BASIC16.15■□□□□ 0.18
Chmp1b1Q99LU0 Gm16712-201ENSMUST00000181962 1960 ntTSL 2 BASIC16.15■□□□□ 0.18
Chmp1b1Q99LU0 Kmt5b-203ENSMUST00000113968 3216 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Chmp1b1Q99LU0 Pacsin1-204ENSMUST00000114873 1857 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Chmp1b1Q99LU0 Gm13401-201ENSMUST00000117074 291 ntBASIC16.15■□□□□ 0.18
Chmp1b1Q99LU0 Gm11643-201ENSMUST00000119578 864 ntBASIC16.15■□□□□ 0.18
Chmp1b1Q99LU0 Lypla1-208ENSMUST00000150971 877 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Chmp1b1Q99LU0 Gm2990-201ENSMUST00000180662 1118 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Chmp1b1Q99LU0 1700007L15Rik-201ENSMUST00000180923 737 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Chmp1b1Q99LU0 Gm45337-201ENSMUST00000210537 1267 ntAPPRIS P1 BASIC16.15■□□□□ 0.18
Chmp1b1Q99LU0 Slc25a47-202ENSMUST00000221080 1890 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Chmp1b1Q99LU0 Ppp2r5d-201ENSMUST00000002839 2926 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Chmp1b1Q99LU0 Mtcp1-201ENSMUST00000033542 1592 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Chmp1b1Q99LU0 Fam160b1-201ENSMUST00000036407 5630 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Chmp1b1Q99LU0 4930505A04Rik-201ENSMUST00000041763 904 ntAPPRIS P1 TSL 2 BASIC16.15■□□□□ 0.18
Chmp1b1Q99LU0 Naf1-201ENSMUST00000118009 2990 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Chmp1b1Q99LU0 Xxylt1-201ENSMUST00000055389 2987 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Chmp1b1Q99LU0 A930017K11Rik-201ENSMUST00000162431 2539 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Chmp1b1Q99LU0 Six3os1-212ENSMUST00000177220 5601 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Chmp1b1Q99LU0 Fcgrt-201ENSMUST00000003512 1770 ntAPPRIS P2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Chmp1b1Q99LU0 Tnxb-202ENSMUST00000168533 9381 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Chmp1b1Q99LU0 Irak1-201ENSMUST00000033769 2890 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Chmp1b1Q99LU0 4930461C15Rik-201ENSMUST00000133622 1302 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Chmp1b1Q99LU0 Crebzf-201ENSMUST00000061767 3376 ntAPPRIS P1 BASIC16.15■□□□□ 0.18
Chmp1b1Q99LU0 Auh-202ENSMUST00000110031 3235 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Chmp1b1Q99LU0 Bcs1l-202ENSMUST00000113732 1679 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.18
Chmp1b1Q99LU0 Med14-202ENSMUST00000096495 6963 ntAPPRIS P2 TSL 5 BASIC16.14■□□□□ 0.18
Chmp1b1Q99LU0 Sfmbt1-201ENSMUST00000054230 7837 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
Chmp1b1Q99LU0 Gm27029-202ENSMUST00000107259 1855 ntAPPRIS P5 TSL 5 BASIC16.14■□□□□ 0.17
Chmp1b1Q99LU0 Meox1-201ENSMUST00000057054 2228 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Chmp1b1Q99LU0 Lmbr1-207ENSMUST00000200564 1598 ntTSL 5 BASIC16.14■□□□□ 0.17
Chmp1b1Q99LU0 Cep152-201ENSMUST00000089776 5768 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Chmp1b1Q99LU0 Tbc1d9-201ENSMUST00000034145 4631 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Chmp1b1Q99LU0 Phldb3-201ENSMUST00000073325 2273 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
Chmp1b1Q99LU0 Naa50-204ENSMUST00000161326 4487 ntAPPRIS ALT1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Chmp1b1Q99LU0 Icam2-201ENSMUST00000001055 1282 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Chmp1b1Q99LU0 Smim1-212ENSMUST00000146543 839 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Chmp1b1Q99LU0 Gm6576-201ENSMUST00000169678 883 ntBASIC16.14■□□□□ 0.17
Chmp1b1Q99LU0 4833428L15Rik-202ENSMUST00000215652 641 ntTSL 3 BASIC16.14■□□□□ 0.17
Chmp1b1Q99LU0 Tmem239-201ENSMUST00000055421 1291 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Chmp1b1Q99LU0 Lgals7-201ENSMUST00000081457 754 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Chmp1b1Q99LU0 Kat2b-ps-201ENSMUST00000128468 2490 ntBASIC16.14■□□□□ 0.17
Chmp1b1Q99LU0 Meg3-201ENSMUST00000124106 1988 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Chmp1b1Q99LU0 Sdk1-202ENSMUST00000085774 10352 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Chmp1b1Q99LU0 Lamc1-201ENSMUST00000027752 7622 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Chmp1b1Q99LU0 Dlgap1-206ENSMUST00000133717 2355 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.17
Chmp1b1Q99LU0 Zfp768-201ENSMUST00000060783 2356 ntAPPRIS P2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Chmp1b1Q99LU0 A930024E05Rik-201ENSMUST00000148466 1896 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Chmp1b1Q99LU0 Rmnd1-201ENSMUST00000042251 3139 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Chmp1b1Q99LU0 Cnn2-201ENSMUST00000004784 2460 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Chmp1b1Q99LU0 A530084C06Rik-201ENSMUST00000170573 3200 ntAPPRIS P1 BASIC16.13■□□□□ 0.17
Chmp1b1Q99LU0 Dvl2-207ENSMUST00000190940 5037 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Chmp1b1Q99LU0 Capg-202ENSMUST00000114071 1400 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Chmp1b1Q99LU0 Best2-203ENSMUST00000209421 2212 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Chmp1b1Q99LU0 Tpm1-204ENSMUST00000113684 887 ntTSL 5 BASIC16.13■□□□□ 0.17
Chmp1b1Q99LU0 Gm5643-201ENSMUST00000117081 966 ntBASIC16.13■□□□□ 0.17
Chmp1b1Q99LU0 Gm15378-201ENSMUST00000121894 207 ntBASIC16.13■□□□□ 0.17
Chmp1b1Q99LU0 Dohh-206ENSMUST00000131968 672 ntAPPRIS P1 TSL 3 BASIC16.13■□□□□ 0.17
Chmp1b1Q99LU0 Gm21863-201ENSMUST00000179133 336 ntAPPRIS P1 BASIC16.13■□□□□ 0.17
Chmp1b1Q99LU0 Smim10l1-204ENSMUST00000191462 574 ntTSL 3 BASIC16.13■□□□□ 0.17
Chmp1b1Q99LU0 Gm44899-201ENSMUST00000207451 391 ntTSL 3 BASIC16.13■□□□□ 0.17
Retrieved 100 of 76,532 protein–RNA pairs in 24.8 ms