Protein–RNA interactions for Protein: Q91XX1

Pcdhgc3, Protocadherin gamma C3, mousemouse

Predictions only

Length 934 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhgc3Q91XX1 Mief1-203ENSMUST00000228788 5352 ntAPPRIS P1 BASIC16.18■□□□□ 0.18
Pcdhgc3Q91XX1 Dync1li2-201ENSMUST00000041769 4627 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Pcdhgc3Q91XX1 Rhobtb1-202ENSMUST00000067908 4422 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Pcdhgc3Q91XX1 Arl4d-201ENSMUST00000039388 1382 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Pcdhgc3Q91XX1 Gm36858-201ENSMUST00000194501 2391 ntBASIC16.18■□□□□ 0.18
Pcdhgc3Q91XX1 Aida-206ENSMUST00000193625 1810 ntTSL 3 BASIC16.18■□□□□ 0.18
Pcdhgc3Q91XX1 Dlx6-203ENSMUST00000171311 1071 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Pcdhgc3Q91XX1 Neurl1b-203ENSMUST00000183077 1084 ntTSL 5 BASIC16.18■□□□□ 0.18
Pcdhgc3Q91XX1 Vkorc1l1-202ENSMUST00000073945 650 ntTSL 2 BASIC16.18■□□□□ 0.18
Pcdhgc3Q91XX1 Gm9867-201ENSMUST00000192212 2647 ntBASIC16.18■□□□□ 0.18
Pcdhgc3Q91XX1 Ncoa1-201ENSMUST00000085814 7329 ntAPPRIS P2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Pcdhgc3Q91XX1 Fam171a1-203ENSMUST00000091505 3449 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Pcdhgc3Q91XX1 Ankrd17-203ENSMUST00000168058 9311 ntAPPRIS ALT2 TSL 5 BASIC16.18■□□□□ 0.18
Pcdhgc3Q91XX1 Taf6l-201ENSMUST00000003777 1869 ntTSL 5 BASIC16.18■□□□□ 0.18
Pcdhgc3Q91XX1 Gal3st1-201ENSMUST00000063004 1879 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Pcdhgc3Q91XX1 Large2-215ENSMUST00000176810 2477 ntAPPRIS ALT2 TSL 5 BASIC16.18■□□□□ 0.18
Pcdhgc3Q91XX1 Yeats4-201ENSMUST00000020382 1327 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Pcdhgc3Q91XX1 Haspin-201ENSMUST00000052140 2810 ntAPPRIS P1 BASIC16.18■□□□□ 0.18
Pcdhgc3Q91XX1 Rpf1-201ENSMUST00000029838 1661 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Pcdhgc3Q91XX1 2210016F16Rik-201ENSMUST00000022032 3051 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Pcdhgc3Q91XX1 Ubfd1-201ENSMUST00000033158 4849 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Pcdhgc3Q91XX1 A230103J11Rik-202ENSMUST00000156084 2086 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Pcdhgc3Q91XX1 Slc6a1-204ENSMUST00000204074 1740 ntTSL 5 BASIC16.17■□□□□ 0.18
Pcdhgc3Q91XX1 Lrig3-201ENSMUST00000074807 4016 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Pcdhgc3Q91XX1 Rab11fip4-201ENSMUST00000017783 7156 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Pcdhgc3Q91XX1 2810410L24Rik-202ENSMUST00000155681 2615 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Pcdhgc3Q91XX1 H2-Q4-201ENSMUST00000081435 1793 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Pcdhgc3Q91XX1 Sybu-202ENSMUST00000110267 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Pcdhgc3Q91XX1 Sfrp1-201ENSMUST00000033952 4372 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Pcdhgc3Q91XX1 Snx30-201ENSMUST00000030080 7314 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Pcdhgc3Q91XX1 Slc15a3-201ENSMUST00000025646 2345 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Pcdhgc3Q91XX1 Mis18bp1-208ENSMUST00000222244 2053 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Pcdhgc3Q91XX1 Gm6583-201ENSMUST00000051117 2233 ntAPPRIS P1 BASIC16.17■□□□□ 0.18
Pcdhgc3Q91XX1 Shank3-203ENSMUST00000109309 7365 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Pcdhgc3Q91XX1 Prmt1-203ENSMUST00000207370 2147 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Pcdhgc3Q91XX1 Klhdc8b-201ENSMUST00000035232 1897 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Pcdhgc3Q91XX1 Rbm33-204ENSMUST00000114884 6256 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
Pcdhgc3Q91XX1 Cyp2r1-201ENSMUST00000032908 1627 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Pcdhgc3Q91XX1 Specc1-210ENSMUST00000201723 2690 ntTSL 5 BASIC16.16■□□□□ 0.18
Pcdhgc3Q91XX1 Lactbl1-201ENSMUST00000178843 2954 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
Pcdhgc3Q91XX1 Plekha7-210ENSMUST00000182834 5257 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Pcdhgc3Q91XX1 Galnt17-202ENSMUST00000160609 2875 ntTSL 5 BASIC16.16■□□□□ 0.18
Pcdhgc3Q91XX1 Cyyr1-204ENSMUST00000175700 1294 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Pcdhgc3Q91XX1 Yjefn3-203ENSMUST00000180068 629 ntTSL 5 BASIC16.16■□□□□ 0.18
Pcdhgc3Q91XX1 Rian-206ENSMUST00000182119 329 ntTSL 3 BASIC16.16■□□□□ 0.18
Pcdhgc3Q91XX1 Nt5c-201ENSMUST00000021082 858 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Pcdhgc3Q91XX1 1700081N11Rik-202ENSMUST00000221447 569 ntTSL 3 BASIC16.16■□□□□ 0.18
Pcdhgc3Q91XX1 Med30-201ENSMUST00000037115 1007 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Pcdhgc3Q91XX1 B230217C12Rik-201ENSMUST00000054783 1189 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
Pcdhgc3Q91XX1 Slc39a7-201ENSMUST00000025186 2244 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Pcdhgc3Q91XX1 Lca5l-202ENSMUST00000113804 3162 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Pcdhgc3Q91XX1 Tfap2a-209ENSMUST00000225180 1828 ntBASIC16.16■□□□□ 0.18
Pcdhgc3Q91XX1 Clip2-202ENSMUST00000100647 4994 ntAPPRIS P4 TSL 1 (best) BASIC16.16■□□□□ 0.18
Pcdhgc3Q91XX1 Wscd2-201ENSMUST00000094452 4302 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Pcdhgc3Q91XX1 Mmp11-201ENSMUST00000000924 2288 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Pcdhgc3Q91XX1 Dtx2-201ENSMUST00000005072 2562 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
Pcdhgc3Q91XX1 Sptssa-201ENSMUST00000056228 1346 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Pcdhgc3Q91XX1 Prex1-201ENSMUST00000036719 6533 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Pcdhgc3Q91XX1 Cygb-201ENSMUST00000021166 2331 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Pcdhgc3Q91XX1 Tmem170-201ENSMUST00000034431 3878 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Pcdhgc3Q91XX1 Mcoln2-202ENSMUST00000098524 2492 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Pcdhgc3Q91XX1 Dclk2-208ENSMUST00000194452 2066 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Pcdhgc3Q91XX1 Rbck1-202ENSMUST00000109847 2384 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Pcdhgc3Q91XX1 Zfp710-201ENSMUST00000049680 4721 ntAPPRIS P4 TSL 1 (best) BASIC16.15■□□□□ 0.18
Pcdhgc3Q91XX1 Ripk1-201ENSMUST00000021844 3266 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Pcdhgc3Q91XX1 Ogfr-201ENSMUST00000029087 2449 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Pcdhgc3Q91XX1 Ptprs-201ENSMUST00000067538 6855 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Pcdhgc3Q91XX1 Gm10418-201ENSMUST00000100943 576 ntBASIC16.15■□□□□ 0.18
Pcdhgc3Q91XX1 Gm13441-201ENSMUST00000140104 1168 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Pcdhgc3Q91XX1 1700125G02Rik-201ENSMUST00000154947 519 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Pcdhgc3Q91XX1 Gm37812-201ENSMUST00000195216 2475 ntBASIC16.15■□□□□ 0.18
Pcdhgc3Q91XX1 Fscn1-207ENSMUST00000198017 2157 ntTSL 5 BASIC16.15■□□□□ 0.18
Pcdhgc3Q91XX1 Slc37a4-203ENSMUST00000213388 2344 ntAPPRIS P2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Pcdhgc3Q91XX1 Atp1a1-201ENSMUST00000036493 3679 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Pcdhgc3Q91XX1 Scin-201ENSMUST00000002640 2995 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Pcdhgc3Q91XX1 Cops7b-201ENSMUST00000027446 2231 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Pcdhgc3Q91XX1 Dnal4-201ENSMUST00000023055 1469 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Pcdhgc3Q91XX1 Nrm-201ENSMUST00000074259 1466 ntAPPRIS P2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Pcdhgc3Q91XX1 Trim28-201ENSMUST00000005705 3245 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Pcdhgc3Q91XX1 Adgrb2-204ENSMUST00000106015 4982 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Pcdhgc3Q91XX1 Chn1-209ENSMUST00000166199 3876 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Pcdhgc3Q91XX1 Pon1-201ENSMUST00000002663 1513 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.18
Pcdhgc3Q91XX1 Dao-201ENSMUST00000086599 1525 ntTSL 1 (best) BASIC16.14■□□□□ 0.18
Pcdhgc3Q91XX1 Mzf1-202ENSMUST00000182087 2197 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Pcdhgc3Q91XX1 Vim-201ENSMUST00000028062 2193 ntAPPRIS P2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Pcdhgc3Q91XX1 Glmn-201ENSMUST00000078021 2015 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Pcdhgc3Q91XX1 Apoa5-202ENSMUST00000121598 2515 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Pcdhgc3Q91XX1 Gm17509-201ENSMUST00000165680 2375 ntAPPRIS P1 BASIC16.14■□□□□ 0.17
Pcdhgc3Q91XX1 Pi4kb-202ENSMUST00000107251 2895 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Pcdhgc3Q91XX1 Mxd4-201ENSMUST00000042701 3872 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Pcdhgc3Q91XX1 Lmtk2-201ENSMUST00000041804 8114 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Pcdhgc3Q91XX1 Taf5-201ENSMUST00000026027 3258 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Pcdhgc3Q91XX1 Men1-203ENSMUST00000079327 2639 ntAPPRIS P2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Pcdhgc3Q91XX1 Polr2j-202ENSMUST00000111127 900 ntTSL 2 BASIC16.14■□□□□ 0.17
Pcdhgc3Q91XX1 AV356131-201ENSMUST00000206201 750 ntBASIC16.14■□□□□ 0.17
Pcdhgc3Q91XX1 Lmo1-202ENSMUST00000207178 912 ntAPPRIS ALT1 TSL 2 BASIC16.14■□□□□ 0.17
Pcdhgc3Q91XX1 AC121965.1-201ENSMUST00000221422 861 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Pcdhgc3Q91XX1 Yipf4-201ENSMUST00000024873 2133 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Pcdhgc3Q91XX1 Pdlim5-202ENSMUST00000058626 873 ntTSL 5 BASIC16.14■□□□□ 0.17
Pcdhgc3Q91XX1 Adamtsl1-201ENSMUST00000048885 1842 ntTSL 5 BASIC16.14■□□□□ 0.17
Retrieved 100 of 76,532 protein–RNA pairs in 24.8 ms