Protein–RNA interactions for Protein: Q8VIJ6

Sfpq, Splicing factor, proline- and glutamine-rich, mousemouse

Known RBP Predictions only

Length 699 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SfpqQ8VIJ6 Efr3a-201ENSMUST00000015146 5215 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
SfpqQ8VIJ6 Ssfa2-201ENSMUST00000111784 4999 ntAPPRIS ALT2 TSL 5 BASIC18.09■□□□□ 0.49
SfpqQ8VIJ6 Rasgrp2-201ENSMUST00000035716 2219 ntAPPRIS P1 TSL 2 BASIC18.09■□□□□ 0.49
SfpqQ8VIJ6 Gm10849-201ENSMUST00000100397 618 ntBASIC18.09■□□□□ 0.49
SfpqQ8VIJ6 1700030C12Rik-201ENSMUST00000101462 858 ntTSL 5 BASIC18.09■□□□□ 0.49
SfpqQ8VIJ6 Snca-201ENSMUST00000114268 1280 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
SfpqQ8VIJ6 Scamp4-202ENSMUST00000180350 1271 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
SfpqQ8VIJ6 Mir6349-201ENSMUST00000184059 97 ntBASIC18.09■□□□□ 0.49
SfpqQ8VIJ6 AC133650.2-201ENSMUST00000217036 607 ntTSL 3 BASIC18.09■□□□□ 0.49
SfpqQ8VIJ6 Klhl29-201ENSMUST00000020958 7041 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
SfpqQ8VIJ6 Zfx-201ENSMUST00000088102 7002 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
SfpqQ8VIJ6 Fmnl3-203ENSMUST00000120633 4290 ntAPPRIS ALT2 TSL 5 BASIC18.09■□□□□ 0.49
SfpqQ8VIJ6 Tcf7l1-202ENSMUST00000114053 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
SfpqQ8VIJ6 Gm19721-201ENSMUST00000195284 1764 ntBASIC18.09■□□□□ 0.49
SfpqQ8VIJ6 Fezf1-201ENSMUST00000031709 2409 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
SfpqQ8VIJ6 Ddx39b-201ENSMUST00000068056 1739 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
SfpqQ8VIJ6 Nipsnap3b-201ENSMUST00000015391 1552 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
SfpqQ8VIJ6 Antxr2-202ENSMUST00000199088 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.49
SfpqQ8VIJ6 Fez2-202ENSMUST00000112487 2020 ntAPPRIS ALT1 TSL 1 (best) BASIC18.08■□□□□ 0.49
SfpqQ8VIJ6 Stambpl1-201ENSMUST00000054956 2024 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
SfpqQ8VIJ6 Cdv3-207ENSMUST00000190226 3107 ntTSL 5 BASIC18.08■□□□□ 0.49
SfpqQ8VIJ6 Gm11841-201ENSMUST00000117060 1963 ntBASIC18.08■□□□□ 0.49
SfpqQ8VIJ6 A930003O13Rik-203ENSMUST00000199056 1955 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
SfpqQ8VIJ6 Hand1-201ENSMUST00000036917 1904 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
SfpqQ8VIJ6 Fam57b-201ENSMUST00000079423 2328 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
SfpqQ8VIJ6 Tmem203-201ENSMUST00000104998 854 ntAPPRIS P1 BASIC18.08■□□□□ 0.48
SfpqQ8VIJ6 Stmn4-203ENSMUST00000120229 1281 ntTSL 2 BASIC18.08■□□□□ 0.48
SfpqQ8VIJ6 Stx6-209ENSMUST00000195302 955 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
SfpqQ8VIJ6 Gm42569-201ENSMUST00000200539 472 ntBASIC18.08■□□□□ 0.48
SfpqQ8VIJ6 Zfp125-203ENSMUST00000208744 928 ntTSL 5 BASIC18.08■□□□□ 0.48
SfpqQ8VIJ6 Nsun5-201ENSMUST00000000940 2243 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
SfpqQ8VIJ6 Endov-203ENSMUST00000106245 5126 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
SfpqQ8VIJ6 Il6st-208ENSMUST00000184311 2985 ntAPPRIS P2 TSL 5 BASIC18.08■□□□□ 0.48
SfpqQ8VIJ6 Rnf128-201ENSMUST00000113026 2750 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
SfpqQ8VIJ6 Aipl1-201ENSMUST00000048207 2309 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
SfpqQ8VIJ6 Ctcf-201ENSMUST00000005841 3782 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
SfpqQ8VIJ6 Snrnp48-201ENSMUST00000091641 1785 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
SfpqQ8VIJ6 Polr3e-203ENSMUST00000207481 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
SfpqQ8VIJ6 Rnf103-201ENSMUST00000064637 3264 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
SfpqQ8VIJ6 Spi1-201ENSMUST00000002180 2034 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
SfpqQ8VIJ6 Ube2b-202ENSMUST00000109086 585 ntAPPRIS P1 TSL 2 BASIC18.07■□□□□ 0.48
SfpqQ8VIJ6 Gm13216-201ENSMUST00000117145 591 ntBASIC18.07■□□□□ 0.48
SfpqQ8VIJ6 Speg-206ENSMUST00000122266 917 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
SfpqQ8VIJ6 Gm15298-201ENSMUST00000145916 1212 ntTSL 5 BASIC18.07■□□□□ 0.48
SfpqQ8VIJ6 Gm16141-201ENSMUST00000152073 790 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
SfpqQ8VIJ6 Fxyd1-215ENSMUST00000206474 572 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
SfpqQ8VIJ6 Mtag2-201ENSMUST00000058665 714 ntBASIC18.07■□□□□ 0.48
SfpqQ8VIJ6 Sh3yl1-202ENSMUST00000110880 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
SfpqQ8VIJ6 Prdm11-201ENSMUST00000111272 3012 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
SfpqQ8VIJ6 Nsmf-203ENSMUST00000100334 2957 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
SfpqQ8VIJ6 Acsl3-205ENSMUST00000142704 2976 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
SfpqQ8VIJ6 Casd1-201ENSMUST00000015333 3961 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
SfpqQ8VIJ6 Cdk17-201ENSMUST00000069965 3615 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
SfpqQ8VIJ6 Pou3f2-201ENSMUST00000178174 5587 ntAPPRIS P1 BASIC18.07■□□□□ 0.48
SfpqQ8VIJ6 Rsph3a-201ENSMUST00000097423 2189 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
SfpqQ8VIJ6 Sec61a1-201ENSMUST00000032168 3172 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
SfpqQ8VIJ6 Snrk-201ENSMUST00000118886 4811 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
SfpqQ8VIJ6 Gm26860-201ENSMUST00000181674 1489 ntTSL 5 BASIC18.07■□□□□ 0.48
SfpqQ8VIJ6 Snx25-203ENSMUST00000110378 3445 ntAPPRIS ALT2 TSL 5 BASIC18.07■□□□□ 0.48
SfpqQ8VIJ6 Eefsec-201ENSMUST00000165242 2679 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
SfpqQ8VIJ6 Glmn-201ENSMUST00000078021 2015 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
SfpqQ8VIJ6 Bmt2-202ENSMUST00000203078 4462 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
SfpqQ8VIJ6 Gm11769-201ENSMUST00000140273 1657 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
SfpqQ8VIJ6 Emc8-201ENSMUST00000034277 4942 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
SfpqQ8VIJ6 Gm38534-201ENSMUST00000206566 1909 ntTSL 5 BASIC18.06■□□□□ 0.48
SfpqQ8VIJ6 Mybl2-201ENSMUST00000018005 3651 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
SfpqQ8VIJ6 Artn-202ENSMUST00000097913 1568 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
SfpqQ8VIJ6 Atraid-201ENSMUST00000013766 966 ntAPPRIS P2 TSL 1 (best) BASIC18.06■□□□□ 0.48
SfpqQ8VIJ6 Cracr2b-207ENSMUST00000170879 1158 ntAPPRIS ALT2 TSL 5 BASIC18.06■□□□□ 0.48
SfpqQ8VIJ6 Rb1-201ENSMUST00000022701 4656 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
SfpqQ8VIJ6 Asph-201ENSMUST00000038564 1174 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
SfpqQ8VIJ6 Cdkn2a-201ENSMUST00000060501 852 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
SfpqQ8VIJ6 Asph-205ENSMUST00000098275 1007 ntTSL 5 BASIC18.06■□□□□ 0.48
SfpqQ8VIJ6 Zmynd19-201ENSMUST00000028350 3903 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
SfpqQ8VIJ6 Ykt6-201ENSMUST00000002818 2541 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
SfpqQ8VIJ6 Lrch3-203ENSMUST00000135193 2794 ntAPPRIS ALT2 TSL 5 BASIC18.06■□□□□ 0.48
SfpqQ8VIJ6 Glra1-202ENSMUST00000102716 2390 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
SfpqQ8VIJ6 Gnal-201ENSMUST00000025402 5616 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
SfpqQ8VIJ6 Pard6g-201ENSMUST00000070219 3143 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
SfpqQ8VIJ6 Stox2-208ENSMUST00000211737 4573 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
SfpqQ8VIJ6 Tle3-211ENSMUST00000161689 2836 ntTSL 2 BASIC18.05■□□□□ 0.48
SfpqQ8VIJ6 Gm11620-201ENSMUST00000118770 1845 ntBASIC18.05■□□□□ 0.48
SfpqQ8VIJ6 Cnot9-201ENSMUST00000087215 3268 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
SfpqQ8VIJ6 Espn-206ENSMUST00000103196 1323 ntTSL 5 BASIC18.05■□□□□ 0.48
SfpqQ8VIJ6 Tubb4b-ps1-201ENSMUST00000179460 1336 ntBASIC18.05■□□□□ 0.48
SfpqQ8VIJ6 Gm45412-201ENSMUST00000210217 2275 ntBASIC18.05■□□□□ 0.48
SfpqQ8VIJ6 Nploc4-201ENSMUST00000044271 4121 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
SfpqQ8VIJ6 Slc22a12-201ENSMUST00000113451 2213 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
SfpqQ8VIJ6 Coro1a-209ENSMUST00000173108 1170 ntTSL 5 BASIC18.05■□□□□ 0.48
SfpqQ8VIJ6 Gm26571-201ENSMUST00000181399 666 ntBASIC18.05■□□□□ 0.48
SfpqQ8VIJ6 2310068J16Rik-201ENSMUST00000188271 1124 ntBASIC18.05■□□□□ 0.48
SfpqQ8VIJ6 4930413G21Rik-201ENSMUST00000205998 993 ntBASIC18.05■□□□□ 0.48
SfpqQ8VIJ6 Nrg3-201ENSMUST00000166968 4011 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
SfpqQ8VIJ6 Zkscan3-208ENSMUST00000224820 5398 ntBASIC18.05■□□□□ 0.48
SfpqQ8VIJ6 Wdr86-201ENSMUST00000068693 2364 ntAPPRIS P1 TSL 2 BASIC18.05■□□□□ 0.48
SfpqQ8VIJ6 Gm28265-201ENSMUST00000188201 2319 ntBASIC18.05■□□□□ 0.48
SfpqQ8VIJ6 Asic2-201ENSMUST00000021045 3436 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
SfpqQ8VIJ6 2810425M01Rik-201ENSMUST00000180790 1850 ntTSL 5 BASIC18.05■□□□□ 0.48
SfpqQ8VIJ6 Caln1-203ENSMUST00000111288 9327 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
SfpqQ8VIJ6 Coq8b-202ENSMUST00000108378 2276 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Retrieved 100 of 76,532 protein–RNA pairs in 52.5 ms