Protein–RNA interactions for Protein: Q8VEK3

Hnrnpu, Heterogeneous nuclear ribonucleoprotein U, mousemouse

Known RBP Predictions only

Length 800 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HnrnpuQ8VEK3 Igsf8-201ENSMUST00000039506 2278 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
HnrnpuQ8VEK3 Vsig10l-204ENSMUST00000203769 2473 ntAPPRIS P2 TSL 1 (best) BASIC21.3■■□□□ 1
HnrnpuQ8VEK3 Eda-203ENSMUST00000113776 5105 ntTSL 1 (best) BASIC21.3■■□□□ 1
HnrnpuQ8VEK3 Abtb1-201ENSMUST00000032169 1845 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
HnrnpuQ8VEK3 Smpdl3b-201ENSMUST00000030709 2006 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
HnrnpuQ8VEK3 Acads-201ENSMUST00000031524 1870 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
HnrnpuQ8VEK3 Epo-203ENSMUST00000111039 706 ntAPPRIS ALT2 TSL 1 (best) BASIC21.29■■□□□ 1
HnrnpuQ8VEK3 Tlx1os-201ENSMUST00000173437 620 ntTSL 3 BASIC21.29■■□□□ 1
HnrnpuQ8VEK3 Gm9731-201ENSMUST00000209480 747 ntBASIC21.29■■□□□ 1
HnrnpuQ8VEK3 Bean1-203ENSMUST00000167633 3275 ntAPPRIS ALT2 TSL 5 BASIC21.29■■□□□ 1
HnrnpuQ8VEK3 2810408A11Rik-203ENSMUST00000102580 1640 ntAPPRIS P3 TSL 1 (best) BASIC21.29■■□□□ 1
HnrnpuQ8VEK3 Tax1bp3-201ENSMUST00000040687 1523 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
HnrnpuQ8VEK3 Wbp1-202ENSMUST00000113936 1314 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
HnrnpuQ8VEK3 Synpo-205ENSMUST00000130044 4970 ntAPPRIS P3 TSL 2 BASIC21.28■■□□□ 1
HnrnpuQ8VEK3 Rara-204ENSMUST00000107475 2469 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
HnrnpuQ8VEK3 Baiap2-204ENSMUST00000106231 4005 ntAPPRIS ALT2 TSL 1 (best) BASIC21.28■■□□□ 1
HnrnpuQ8VEK3 Gm715-201ENSMUST00000117865 831 ntBASIC21.28■■□□□ 1
HnrnpuQ8VEK3 Ndufb2-202ENSMUST00000119379 455 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
HnrnpuQ8VEK3 AC156016.1-201ENSMUST00000227190 1035 ntBASIC21.28■■□□□ 1
HnrnpuQ8VEK3 Dctn3-201ENSMUST00000030158 973 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
HnrnpuQ8VEK3 1700020N01Rik-201ENSMUST00000057341 1062 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
HnrnpuQ8VEK3 Spdef-205ENSMUST00000167489 1708 ntAPPRIS P1 TSL 5 BASIC21.28■■□□□ 1
HnrnpuQ8VEK3 Mink1-202ENSMUST00000072873 4610 ntAPPRIS ALT2 TSL 5 BASIC21.28■■□□□ 1
HnrnpuQ8VEK3 2310002F09Rik-201ENSMUST00000181454 1607 ntTSL 1 (best) BASIC21.28■■□□□ 1
HnrnpuQ8VEK3 Prss54-205ENSMUST00000213096 1501 ntAPPRIS P3 TSL 5 BASIC21.28■■□□□ 1
HnrnpuQ8VEK3 Wnt10b-207ENSMUST00000228594 1510 ntAPPRIS P1 BASIC21.28■■□□□ 1
HnrnpuQ8VEK3 Hnrnph1-201ENSMUST00000069304 2225 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
HnrnpuQ8VEK3 Misp-205ENSMUST00000219305 2569 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
HnrnpuQ8VEK3 Il17re-208ENSMUST00000204774 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC21.28■■□□□ 1
HnrnpuQ8VEK3 Hoxc9-201ENSMUST00000001706 2374 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
HnrnpuQ8VEK3 Scamp4-201ENSMUST00000079883 1804 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
HnrnpuQ8VEK3 Ctsh-201ENSMUST00000034915 1617 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
HnrnpuQ8VEK3 Slc25a3-201ENSMUST00000076694 1612 ntAPPRIS P2 TSL 1 (best) BASIC21.27■■□□□ 1
HnrnpuQ8VEK3 Mrps18c-203ENSMUST00000112901 820 ntAPPRIS ALT2 TSL 1 (best) BASIC21.27■■□□□ 1
HnrnpuQ8VEK3 Tpm1-208ENSMUST00000113689 904 ntTSL 5 BASIC21.27■■□□□ 1
HnrnpuQ8VEK3 Gm14321-201ENSMUST00000127441 632 ntTSL 3 BASIC21.27■■□□□ 1
HnrnpuQ8VEK3 Gm17098-201ENSMUST00000166507 628 ntTSL 5 BASIC21.27■■□□□ 1
HnrnpuQ8VEK3 Impa1-204ENSMUST00000191670 1100 ntTSL 2 BASIC21.27■■□□□ 1
HnrnpuQ8VEK3 Kcmf1-206ENSMUST00000206378 544 ntTSL 5 BASIC21.27■■□□□ 1
HnrnpuQ8VEK3 Arhgef33-211ENSMUST00000225658 473 ntBASIC21.27■■□□□ 1
HnrnpuQ8VEK3 Gm10549-201ENSMUST00000097634 450 ntAPPRIS P1 TSL 2 BASIC21.27■■□□□ 1
HnrnpuQ8VEK3 Gm16401-202ENSMUST00000197463 2074 ntBASIC21.27■□□□□ 0.99
HnrnpuQ8VEK3 Agpat3-202ENSMUST00000105387 1316 ntAPPRIS P1 TSL 1 (best) BASIC21.27■□□□□ 0.99
HnrnpuQ8VEK3 Dkk4-201ENSMUST00000033936 1315 ntAPPRIS P1 TSL 1 (best) BASIC21.27■□□□□ 0.99
HnrnpuQ8VEK3 Zic1-201ENSMUST00000034927 5606 ntAPPRIS P1 TSL 1 (best) BASIC21.27■□□□□ 0.99
HnrnpuQ8VEK3 Klhdc8b-210ENSMUST00000193895 2718 ntAPPRIS P1 TSL 5 BASIC21.27■□□□□ 0.99
HnrnpuQ8VEK3 Ccnd3-202ENSMUST00000171031 2113 ntAPPRIS P1 TSL 5 BASIC21.26■□□□□ 0.99
HnrnpuQ8VEK3 Rbbp7-203ENSMUST00000112327 1862 ntTSL 5 BASIC21.26■□□□□ 0.99
HnrnpuQ8VEK3 Arfip2-202ENSMUST00000084782 2254 ntAPPRIS P2 TSL 5 BASIC21.26■□□□□ 0.99
HnrnpuQ8VEK3 Tmco4-202ENSMUST00000050949 3318 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
HnrnpuQ8VEK3 Synm-205ENSMUST00000208815 2697 ntAPPRIS ALT2 TSL 5 BASIC21.26■□□□□ 0.99
HnrnpuQ8VEK3 Msmo1-201ENSMUST00000034015 2044 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
HnrnpuQ8VEK3 6430573F11Rik-202ENSMUST00000135373 2573 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
HnrnpuQ8VEK3 Dus3l-201ENSMUST00000007747 2303 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
HnrnpuQ8VEK3 Zc3h14-203ENSMUST00000110104 3146 ntTSL 5 BASIC21.26■□□□□ 0.99
HnrnpuQ8VEK3 Rmnd1-201ENSMUST00000042251 3139 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
HnrnpuQ8VEK3 Ern1-203ENSMUST00000106800 654 ntTSL 3 BASIC21.26■□□□□ 0.99
HnrnpuQ8VEK3 Gm7638-201ENSMUST00000121348 967 ntBASIC21.26■□□□□ 0.99
HnrnpuQ8VEK3 Sqstm1-205ENSMUST00000143379 1266 ntTSL 5 BASIC21.26■□□□□ 0.99
HnrnpuQ8VEK3 9130019P16Rik-203ENSMUST00000185712 650 ntTSL 5 BASIC21.26■□□□□ 0.99
HnrnpuQ8VEK3 Odf3b-204ENSMUST00000227834 930 ntBASIC21.26■□□□□ 0.99
HnrnpuQ8VEK3 Tm2d1-201ENSMUST00000030292 952 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
HnrnpuQ8VEK3 Rex1bd-201ENSMUST00000075175 671 ntAPPRIS P2 TSL 1 (best) BASIC21.26■□□□□ 0.99
HnrnpuQ8VEK3 Gm7579-201ENSMUST00000097943 732 ntAPPRIS P1 BASIC21.26■□□□□ 0.99
HnrnpuQ8VEK3 Slc22a12-201ENSMUST00000113451 2213 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
HnrnpuQ8VEK3 Csf3-201ENSMUST00000038886 1413 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
HnrnpuQ8VEK3 4930447C04Rik-202ENSMUST00000110489 1988 ntAPPRIS ALT2 TSL 5 BASIC21.26■□□□□ 0.99
HnrnpuQ8VEK3 Spata18-202ENSMUST00000071077 1978 ntAPPRIS P2 TSL 5 BASIC21.26■□□□□ 0.99
HnrnpuQ8VEK3 Plppr5-202ENSMUST00000106473 4294 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
HnrnpuQ8VEK3 Tubgcp4-203ENSMUST00000110658 4250 ntAPPRIS ALT1 TSL 1 (best) BASIC21.26■□□□□ 0.99
HnrnpuQ8VEK3 Rnf146-202ENSMUST00000160144 4323 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
HnrnpuQ8VEK3 A430078I02Rik-202ENSMUST00000154066 2233 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
HnrnpuQ8VEK3 Ggt6-202ENSMUST00000100903 1387 ntTSL 5 BASIC21.25■□□□□ 0.99
HnrnpuQ8VEK3 Trim45-202ENSMUST00000094048 1815 ntTSL 5 BASIC21.25■□□□□ 0.99
HnrnpuQ8VEK3 Uso1-204ENSMUST00000202155 3707 ntAPPRIS ALT2 TSL 1 (best) BASIC21.25■□□□□ 0.99
HnrnpuQ8VEK3 Scube2-202ENSMUST00000106728 2890 ntAPPRIS ALT2 TSL 5 BASIC21.25■□□□□ 0.99
HnrnpuQ8VEK3 Zfp629-207ENSMUST00000134446 670 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
HnrnpuQ8VEK3 Pagr1a-202ENSMUST00000200948 1430 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
HnrnpuQ8VEK3 Gm42742-205ENSMUST00000202798 1412 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
HnrnpuQ8VEK3 Dtnbp1-203ENSMUST00000220555 1589 ntAPPRIS ALT2 TSL 5 BASIC21.25■□□□□ 0.99
HnrnpuQ8VEK3 Cdk10-201ENSMUST00000036880 1642 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
HnrnpuQ8VEK3 Itgb4-205ENSMUST00000106461 6208 ntAPPRIS ALT2 TSL 5 BASIC21.25■□□□□ 0.99
HnrnpuQ8VEK3 Matk-202ENSMUST00000117488 1980 ntAPPRIS P3 TSL 1 (best) BASIC21.25■□□□□ 0.99
HnrnpuQ8VEK3 Kank3-201ENSMUST00000048560 2641 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
HnrnpuQ8VEK3 Krt73-201ENSMUST00000063292 2165 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
HnrnpuQ8VEK3 Car9-201ENSMUST00000030183 2023 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
HnrnpuQ8VEK3 Fbxo33-201ENSMUST00000043204 3688 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
HnrnpuQ8VEK3 Appl2-201ENSMUST00000020500 3020 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
HnrnpuQ8VEK3 Col27a1-201ENSMUST00000036300 7612 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
HnrnpuQ8VEK3 Vps53-203ENSMUST00000108419 2209 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
HnrnpuQ8VEK3 0610012G03Rik-201ENSMUST00000202722 1445 ntAPPRIS P1 BASIC21.24■□□□□ 0.99
HnrnpuQ8VEK3 Gm15556-201ENSMUST00000122904 663 ntTSL 5 BASIC21.24■□□□□ 0.99
HnrnpuQ8VEK3 Casp3-203ENSMUST00000210534 583 ntTSL 5 BASIC21.24■□□□□ 0.99
HnrnpuQ8VEK3 2510002D24Rik-201ENSMUST00000055413 1281 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
HnrnpuQ8VEK3 Mfap2-201ENSMUST00000071977 1073 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
HnrnpuQ8VEK3 Cacng6-202ENSMUST00000183200 1977 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
HnrnpuQ8VEK3 Cdk12-203ENSMUST00000107539 5912 ntAPPRIS ALT2 TSL 5 BASIC21.24■□□□□ 0.99
HnrnpuQ8VEK3 Cep68-204ENSMUST00000162811 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC21.24■□□□□ 0.99
HnrnpuQ8VEK3 Dvl3-204ENSMUST00000171774 2319 ntTSL 5 BASIC21.23■□□□□ 0.99
HnrnpuQ8VEK3 Mmp17-201ENSMUST00000031390 6422 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Retrieved 100 of 76,532 protein–RNA pairs in 27.7 ms