Protein–RNA interactions for Protein: Q8VDP2

UPF0428 protein CXorf56 homolog, mousemouse

Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Q8VDP2 Gm45417-201ENSMUST00000209533 758 ntBASIC16.73■□□□□ 0.27
Q8VDP2 Rps19bp1-201ENSMUST00000052499 830 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Q8VDP2 C1ql4-201ENSMUST00000064462 874 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Q8VDP2 Metap1-201ENSMUST00000029804 2686 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Q8VDP2 Stambpl1-201ENSMUST00000054956 2024 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Q8VDP2 Fam214b-204ENSMUST00000107958 3280 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Q8VDP2 Arhgdia-202ENSMUST00000106197 1867 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Q8VDP2 Shq1-204ENSMUST00000170667 1990 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Q8VDP2 Arid4b-204ENSMUST00000110536 5783 ntTSL 5 BASIC16.73■□□□□ 0.27
Q8VDP2 Zmiz1-201ENSMUST00000007961 5397 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Q8VDP2 Brd2-203ENSMUST00000114242 4483 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Q8VDP2 Mmadhc-201ENSMUST00000102769 1342 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Q8VDP2 Slc35f4-201ENSMUST00000074368 1931 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Q8VDP2 Impa2-201ENSMUST00000025403 1661 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Q8VDP2 Gm21981-201ENSMUST00000143789 2721 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
Q8VDP2 Tha1-201ENSMUST00000033230 1770 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Q8VDP2 Ss18-201ENSMUST00000040924 3090 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
Q8VDP2 Eif4g1-201ENSMUST00000044783 5444 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
Q8VDP2 Gm5934-201ENSMUST00000120734 2588 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
Q8VDP2 Kcnq5-203ENSMUST00000115300 6975 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Q8VDP2 Mrpl16-201ENSMUST00000167199 1122 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Q8VDP2 Gm20522-201ENSMUST00000173576 784 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Q8VDP2 Ikzf1-202ENSMUST00000048122 911 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Q8VDP2 Irf8-205ENSMUST00000162001 2270 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Q8VDP2 Nap1l4-201ENSMUST00000072727 2285 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Q8VDP2 Ubc-203ENSMUST00000156249 2581 ntAPPRIS P1 TSL 2 BASIC16.72■□□□□ 0.27
Q8VDP2 Eif4g3-205ENSMUST00000105831 6235 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
Q8VDP2 Hcfc2-201ENSMUST00000020478 3422 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.27
Q8VDP2 Dusp28-201ENSMUST00000060913 1314 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Q8VDP2 Cacna1a-202ENSMUST00000122053 7589 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
Q8VDP2 Kcna1-202ENSMUST00000203094 3150 ntAPPRIS P1 BASIC16.71■□□□□ 0.27
Q8VDP2 Golga5-201ENSMUST00000021609 3390 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Q8VDP2 Trpv4-203ENSMUST00000112219 2295 ntTSL 5 BASIC16.71■□□□□ 0.27
Q8VDP2 Matk-204ENSMUST00000120265 1618 ntAPPRIS ALT2 TSL 5 BASIC16.71■□□□□ 0.27
Q8VDP2 Snx18-201ENSMUST00000109241 4447 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Q8VDP2 Itsn1-203ENSMUST00000095909 6103 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Q8VDP2 Spint1-202ENSMUST00000110816 1913 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.27
Q8VDP2 A830018L16Rik-201ENSMUST00000048613 2779 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
Q8VDP2 Jph4-201ENSMUST00000022819 4489 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Q8VDP2 Dnajc6-202ENSMUST00000094953 5322 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
Q8VDP2 1700016H13Rik-205ENSMUST00000134926 1104 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Q8VDP2 Igfbp7-202ENSMUST00000163898 1200 ntAPPRIS P4 TSL 5 BASIC16.71■□□□□ 0.27
Q8VDP2 Gm27151-202ENSMUST00000185015 1145 ntTSL 5 BASIC16.71■□□□□ 0.27
Q8VDP2 Fuz-214ENSMUST00000209132 853 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Q8VDP2 Sh2b1-203ENSMUST00000205440 3089 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
Q8VDP2 Bag4-201ENSMUST00000038498 4876 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Q8VDP2 Hjurp-202ENSMUST00000065420 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
Q8VDP2 Becn1-217ENSMUST00000172233 1493 ntTSL 5 BASIC16.71■□□□□ 0.27
Q8VDP2 G3bp2-204ENSMUST00000169094 2716 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
Q8VDP2 Pick1-206ENSMUST00000166155 1699 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Q8VDP2 Gm37736-201ENSMUST00000193564 2802 ntBASIC16.71■□□□□ 0.27
Q8VDP2 Lmnb1-201ENSMUST00000025486 2843 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Q8VDP2 Klf15-202ENSMUST00000113530 2374 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.26
Q8VDP2 Tgfb2-201ENSMUST00000045288 5116 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.26
Q8VDP2 Klhdc10-201ENSMUST00000068240 3951 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Q8VDP2 Gm8839-201ENSMUST00000121279 1645 ntBASIC16.7■□□□□ 0.26
Q8VDP2 Pgbd5-201ENSMUST00000052580 2824 ntAPPRIS P2 TSL 5 BASIC16.7■□□□□ 0.26
Q8VDP2 Des-201ENSMUST00000027409 3028 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Q8VDP2 Pcdha3-201ENSMUST00000192503 5332 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Q8VDP2 Pdia3-201ENSMUST00000028683 2770 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Q8VDP2 Selplg-201ENSMUST00000100874 1855 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Q8VDP2 Pacsin3-202ENSMUST00000059566 1867 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Q8VDP2 Paqr6-204ENSMUST00000147991 1670 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Q8VDP2 Rfx5-207ENSMUST00000137088 4333 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
Q8VDP2 Ier3ip1-201ENSMUST00000026487 1395 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Q8VDP2 Stau2-203ENSMUST00000115359 1151 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Q8VDP2 Josd2-211ENSMUST00000134398 563 ntTSL 5 BASIC16.7■□□□□ 0.26
Q8VDP2 Hsd17b3-202ENSMUST00000166224 1286 ntAPPRIS P1 TSL 2 BASIC16.7■□□□□ 0.26
Q8VDP2 Dleu2-211ENSMUST00000183066 788 ntTSL 3 BASIC16.7■□□□□ 0.26
Q8VDP2 Mir6236-201ENSMUST00000184437 123 ntBASIC16.7■□□□□ 0.26
Q8VDP2 Evx1os-201ENSMUST00000125305 2916 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Q8VDP2 Saysd1-201ENSMUST00000059666 2315 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Q8VDP2 Ccnj-202ENSMUST00000119316 3763 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
Q8VDP2 Cpne6-201ENSMUST00000074225 2201 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
Q8VDP2 Usp4-201ENSMUST00000035237 3662 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
Q8VDP2 Tmed4-201ENSMUST00000004508 2003 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Q8VDP2 Rimbp3-201ENSMUST00000169803 5787 ntAPPRIS P1 BASIC16.7■□□□□ 0.26
Q8VDP2 Mcrs1-201ENSMUST00000041190 1915 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Q8VDP2 Shroom3-201ENSMUST00000113051 6435 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Q8VDP2 Cant1-204ENSMUST00000106288 2873 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
Q8VDP2 Wisp2-201ENSMUST00000029188 1719 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Q8VDP2 Phc2-201ENSMUST00000030588 3949 ntAPPRIS P3 TSL 5 BASIC16.7■□□□□ 0.26
Q8VDP2 Rabep1-201ENSMUST00000076270 5408 ntAPPRIS P2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Q8VDP2 Znfx1-201ENSMUST00000048988 7218 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Q8VDP2 Gm10676-201ENSMUST00000098778 3221 ntBASIC16.7■□□□□ 0.26
Q8VDP2 Prss56-201ENSMUST00000044533 2180 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Q8VDP2 Dyx1c1-201ENSMUST00000034734 1975 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
Q8VDP2 Sarm1-202ENSMUST00000108287 4868 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Q8VDP2 Gm10584-201ENSMUST00000207036 2628 ntBASIC16.69■□□□□ 0.26
Q8VDP2 Itga5-201ENSMUST00000023128 4382 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Q8VDP2 Fkbp1a-201ENSMUST00000044011 1658 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Q8VDP2 Zfp326-201ENSMUST00000031227 2667 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Q8VDP2 Insig1-201ENSMUST00000059155 2697 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Q8VDP2 Bicdl2-201ENSMUST00000062967 1913 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Q8VDP2 Tox2-202ENSMUST00000109428 2947 ntAPPRIS ALT2 TSL 5 BASIC16.69■□□□□ 0.26
Q8VDP2 Nr0b1-201ENSMUST00000026036 1808 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Q8VDP2 Gm13620-201ENSMUST00000131198 511 ntTSL 3 BASIC16.69■□□□□ 0.26
Q8VDP2 Rfxap-204ENSMUST00000217267 696 ntAPPRIS P2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Q8VDP2 AC138214.1-201ENSMUST00000223838 420 ntAPPRIS P1 BASIC16.69■□□□□ 0.26
Q8VDP2 Fam96b-201ENSMUST00000093234 639 ntTSL 5 BASIC16.69■□□□□ 0.26
Retrieved 100 of 76,532 protein–RNA pairs in 25.3 ms