Protein–RNA interactions for Protein: Q8R4G9

Chrna3, Neuronal acetylcholine receptor subunit alpha-3, mousemouse

Predictions only

Length 499 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chrna3Q8R4G9 2310022A10Rik-201ENSMUST00000067386 2701 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Chrna3Q8R4G9 Krt13-201ENSMUST00000007275 1654 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Chrna3Q8R4G9 Tmem136-202ENSMUST00000213544 2463 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Chrna3Q8R4G9 Mff-208ENSMUST00000160786 1645 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Chrna3Q8R4G9 Best2-203ENSMUST00000209421 2212 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Chrna3Q8R4G9 Clstn2-201ENSMUST00000035027 4365 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Chrna3Q8R4G9 Ets1-201ENSMUST00000034534 5080 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Chrna3Q8R4G9 Pagr1a-202ENSMUST00000200948 1430 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Chrna3Q8R4G9 Gm42742-205ENSMUST00000202798 1412 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Chrna3Q8R4G9 Sarm1-202ENSMUST00000108287 4868 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Chrna3Q8R4G9 Dut-201ENSMUST00000051605 1950 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Chrna3Q8R4G9 Map1lc3b-204ENSMUST00000181826 2633 ntBASIC16.81■□□□□ 0.28
Chrna3Q8R4G9 Hist1h4a-201ENSMUST00000102964 539 ntAPPRIS P1 BASIC16.81■□□□□ 0.28
Chrna3Q8R4G9 Gm14453-201ENSMUST00000139677 553 ntTSL 3 BASIC16.81■□□□□ 0.28
Chrna3Q8R4G9 Gm2431-201ENSMUST00000171531 519 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
Chrna3Q8R4G9 Gm7977-201ENSMUST00000193787 748 ntBASIC16.81■□□□□ 0.28
Chrna3Q8R4G9 Pigf-201ENSMUST00000024957 988 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Chrna3Q8R4G9 Banf1-201ENSMUST00000025762 735 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Chrna3Q8R4G9 Csnk1e-203ENSMUST00000122044 3174 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Chrna3Q8R4G9 A930029G22Rik-201ENSMUST00000181032 1710 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Chrna3Q8R4G9 4930503L19Rik-201ENSMUST00000067556 2291 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Chrna3Q8R4G9 Zfp622-201ENSMUST00000061875 2802 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Chrna3Q8R4G9 Prss53-202ENSMUST00000205300 1662 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Chrna3Q8R4G9 Camkk2-211ENSMUST00000200109 2751 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
Chrna3Q8R4G9 Prss54-205ENSMUST00000213096 1501 ntAPPRIS P3 TSL 5 BASIC16.8■□□□□ 0.28
Chrna3Q8R4G9 Lrrc7-201ENSMUST00000106044 5918 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
Chrna3Q8R4G9 Dlgap4-205ENSMUST00000109567 4840 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
Chrna3Q8R4G9 Gm20517-202ENSMUST00000132397 4807 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Chrna3Q8R4G9 Igsf23-201ENSMUST00000043440 1908 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Chrna3Q8R4G9 A830018L16Rik-208ENSMUST00000171690 6158 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
Chrna3Q8R4G9 Zbtb8a-201ENSMUST00000030610 2321 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Chrna3Q8R4G9 Ptpra-201ENSMUST00000028769 3227 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Chrna3Q8R4G9 Bdkrb1-202ENSMUST00000182899 1313 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
Chrna3Q8R4G9 Bdkrb1-201ENSMUST00000041229 1338 ntAPPRIS P1 BASIC16.8■□□□□ 0.28
Chrna3Q8R4G9 Gm16061-201ENSMUST00000122167 857 ntBASIC16.8■□□□□ 0.28
Chrna3Q8R4G9 Dlgap2-209ENSMUST00000152652 3842 ntAPPRIS P4 TSL 1 (best) BASIC16.8■□□□□ 0.28
Chrna3Q8R4G9 Fgf8-201ENSMUST00000026240 1117 ntAPPRIS P4 TSL 1 (best) BASIC16.8■□□□□ 0.28
Chrna3Q8R4G9 Snx12-201ENSMUST00000077876 1002 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Chrna3Q8R4G9 3110070M22Rik-201ENSMUST00000099148 1123 ntAPPRIS P1 BASIC16.8■□□□□ 0.28
Chrna3Q8R4G9 Thegl-202ENSMUST00000117880 1641 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Chrna3Q8R4G9 Klhl33-201ENSMUST00000164415 1602 ntTSL 5 BASIC16.8■□□□□ 0.28
Chrna3Q8R4G9 Atp8b1-201ENSMUST00000025482 6440 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Chrna3Q8R4G9 6330411D24Rik-201ENSMUST00000211105 1568 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Chrna3Q8R4G9 Rrbp1-202ENSMUST00000037875 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Chrna3Q8R4G9 Ube2q2-201ENSMUST00000059555 3456 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
Chrna3Q8R4G9 Kdelr2-201ENSMUST00000110731 1829 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Chrna3Q8R4G9 Klhl31-201ENSMUST00000057781 6494 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Chrna3Q8R4G9 Dhx30-224ENSMUST00000200066 4623 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Chrna3Q8R4G9 Thsd7a-202ENSMUST00000119581 5678 ntAPPRIS P2 TSL 5 BASIC16.79■□□□□ 0.28
Chrna3Q8R4G9 Cnn2-201ENSMUST00000004784 2460 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Chrna3Q8R4G9 Nptn-212ENSMUST00000177292 1390 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
Chrna3Q8R4G9 Fam69a-201ENSMUST00000031198 2721 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Chrna3Q8R4G9 Gm3488-202ENSMUST00000181562 1945 ntAPPRIS P5 TSL 5 BASIC16.79■□□□□ 0.28
Chrna3Q8R4G9 AC125311.2-201ENSMUST00000227477 1940 ntBASIC16.79■□□□□ 0.28
Chrna3Q8R4G9 Ccnd3-ps-201ENSMUST00000117963 881 ntBASIC16.79■□□□□ 0.28
Chrna3Q8R4G9 Arpc4-204ENSMUST00000204802 794 ntTSL 3 BASIC16.79■□□□□ 0.28
Chrna3Q8R4G9 Lsm1-203ENSMUST00000211168 343 ntTSL 3 BASIC16.79■□□□□ 0.28
Chrna3Q8R4G9 Lhfpl4-201ENSMUST00000162280 4762 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Chrna3Q8R4G9 Tmem198-202ENSMUST00000113575 2185 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Chrna3Q8R4G9 Skap1-203ENSMUST00000100521 1539 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Chrna3Q8R4G9 Skap1-204ENSMUST00000103154 1507 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
Chrna3Q8R4G9 Mycbp-202ENSMUST00000106202 1536 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Chrna3Q8R4G9 Dnajb2-208ENSMUST00000188346 1823 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Chrna3Q8R4G9 Cmip-202ENSMUST00000166750 2408 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
Chrna3Q8R4G9 Mmp23-201ENSMUST00000030937 1434 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Chrna3Q8R4G9 Ctsf-201ENSMUST00000119694 1975 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Chrna3Q8R4G9 Myo5b-201ENSMUST00000074157 6745 ntAPPRIS P2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Chrna3Q8R4G9 Map3k7cl-201ENSMUST00000026700 1652 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Chrna3Q8R4G9 Odf2-211ENSMUST00000113767 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Chrna3Q8R4G9 Gm38534-201ENSMUST00000206566 1909 ntTSL 5 BASIC16.78■□□□□ 0.28
Chrna3Q8R4G9 Gm42900-201ENSMUST00000197184 2167 ntBASIC16.78■□□□□ 0.28
Chrna3Q8R4G9 Sept9-201ENSMUST00000019038 3784 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Chrna3Q8R4G9 Esrrb-201ENSMUST00000021680 2136 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
Chrna3Q8R4G9 Agfg2-201ENSMUST00000031736 2893 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
Chrna3Q8R4G9 Gm13474-201ENSMUST00000122466 815 ntBASIC16.78■□□□□ 0.28
Chrna3Q8R4G9 Pdxk-ps-203ENSMUST00000183934 680 ntTSL 3 BASIC16.78■□□□□ 0.28
Chrna3Q8R4G9 Gm45442-201ENSMUST00000210038 411 ntTSL 3 BASIC16.78■□□□□ 0.28
Chrna3Q8R4G9 Uchl3-201ENSMUST00000002289 903 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Chrna3Q8R4G9 Hist3h2ba-201ENSMUST00000078267 614 ntAPPRIS P1 BASIC16.78■□□□□ 0.28
Chrna3Q8R4G9 Mfsd13a-201ENSMUST00000086969 2278 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Chrna3Q8R4G9 Tmem8-201ENSMUST00000025010 3464 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Chrna3Q8R4G9 Rbpj-203ENSMUST00000113865 5440 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Chrna3Q8R4G9 A730089K16Rik-201ENSMUST00000194526 2427 ntBASIC16.78■□□□□ 0.28
Chrna3Q8R4G9 Ing4-205ENSMUST00000140131 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Chrna3Q8R4G9 Snapc3-201ENSMUST00000030206 1405 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Chrna3Q8R4G9 2810425M01Rik-201ENSMUST00000180790 1850 ntTSL 5 BASIC16.78■□□□□ 0.28
Chrna3Q8R4G9 Dlgap4-212ENSMUST00000169464 4851 ntTSL 5 BASIC16.77■□□□□ 0.28
Chrna3Q8R4G9 Dixdc1-207ENSMUST00000121634 2420 ntTSL 5 BASIC16.77■□□□□ 0.28
Chrna3Q8R4G9 Slc43a1-202ENSMUST00000111624 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
Chrna3Q8R4G9 Otud5-201ENSMUST00000033494 4259 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.28
Chrna3Q8R4G9 Rarb-207ENSMUST00000225921 2756 ntBASIC16.77■□□□□ 0.28
Chrna3Q8R4G9 Cenps-207ENSMUST00000177408 689 ntTSL 2 BASIC16.77■□□□□ 0.28
Chrna3Q8R4G9 Cspg5-205ENSMUST00000199736 2107 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Chrna3Q8R4G9 Rab28-205ENSMUST00000202913 863 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Chrna3Q8R4G9 Gm17949-201ENSMUST00000210548 1179 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.28
Chrna3Q8R4G9 Htr6-202ENSMUST00000105802 2341 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.28
Chrna3Q8R4G9 Ptges3l-202ENSMUST00000103102 1463 ntAPPRIS P2 TSL 1 (best) BASIC16.77■□□□□ 0.28
Chrna3Q8R4G9 Tmem175-204ENSMUST00000146207 1686 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Chrna3Q8R4G9 Gm10300-201ENSMUST00000094662 2296 ntAPPRIS P1 BASIC16.77■□□□□ 0.27
Chrna3Q8R4G9 Nr4a1-201ENSMUST00000023779 2474 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Retrieved 100 of 76,532 protein–RNA pairs in 51.7 ms