Protein–RNA interactions for Protein: Q8CJ40

Crocc, Rootletin, mousemouse

Predictions only

Length 2,009 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CroccQ8CJ40 Ripor2-202ENSMUST00000058009 2550 ntAPPRIS ALT2 TSL 2 BASIC16.33■□□□□ 0.2
CroccQ8CJ40 Brpf1-204ENSMUST00000113122 4773 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.2
CroccQ8CJ40 Tacc1-201ENSMUST00000084030 7788 ntAPPRIS P4 TSL 1 (best) BASIC16.33■□□□□ 0.2
CroccQ8CJ40 Krt6a-201ENSMUST00000023788 2256 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
CroccQ8CJ40 Chic2-201ENSMUST00000075452 9699 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
CroccQ8CJ40 Tlcd1-203ENSMUST00000108338 714 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
CroccQ8CJ40 Mthfsl-201ENSMUST00000113110 801 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
CroccQ8CJ40 Mthfs-203ENSMUST00000118870 705 ntTSL 3 BASIC16.33■□□□□ 0.2
CroccQ8CJ40 Cmtm7-201ENSMUST00000035009 993 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
CroccQ8CJ40 Mrps28-201ENSMUST00000042148 783 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
CroccQ8CJ40 Lsm10-201ENSMUST00000055575 943 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
CroccQ8CJ40 Mthfs-201ENSMUST00000085256 816 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
CroccQ8CJ40 Mta3-203ENSMUST00000112350 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
CroccQ8CJ40 Tekt1-203ENSMUST00000108503 1397 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CroccQ8CJ40 Prmt2-202ENSMUST00000099571 2052 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
CroccQ8CJ40 Edn2-201ENSMUST00000030384 1462 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CroccQ8CJ40 Yipf2-204ENSMUST00000213809 1883 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
CroccQ8CJ40 Cul4a-201ENSMUST00000016680 3728 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CroccQ8CJ40 Tbc1d13-201ENSMUST00000044556 3595 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CroccQ8CJ40 Gm16127-201ENSMUST00000131619 234 ntTSL 5 BASIC16.32■□□□□ 0.2
CroccQ8CJ40 Creb1-203ENSMUST00000171164 1287 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
CroccQ8CJ40 Ube2a-208ENSMUST00000202812 719 ntTSL 2 BASIC16.32■□□□□ 0.2
CroccQ8CJ40 A230083G16Rik-201ENSMUST00000069553 991 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
CroccQ8CJ40 Nme2-202ENSMUST00000072566 734 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CroccQ8CJ40 Rtl8a-201ENSMUST00000088779 1195 ntAPPRIS P1 BASIC16.32■□□□□ 0.2
CroccQ8CJ40 Itgb7-201ENSMUST00000001327 2674 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CroccQ8CJ40 Gaa-202ENSMUST00000106258 1369 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
CroccQ8CJ40 Zcchc4-203ENSMUST00000113904 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
CroccQ8CJ40 Tasp1-201ENSMUST00000046656 2480 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CroccQ8CJ40 Snip1-201ENSMUST00000052183 2345 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CroccQ8CJ40 Lonrf1-201ENSMUST00000065297 3930 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
CroccQ8CJ40 Ldb1-205ENSMUST00000137771 2014 ntTSL 5 BASIC16.32■□□□□ 0.2
CroccQ8CJ40 Gbe1-201ENSMUST00000023393 2846 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
CroccQ8CJ40 Acads-201ENSMUST00000031524 1870 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CroccQ8CJ40 Mipep-201ENSMUST00000063562 3015 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CroccQ8CJ40 Tfap2a-209ENSMUST00000225180 1828 ntBASIC16.32■□□□□ 0.2
CroccQ8CJ40 Plekhh3-201ENSMUST00000043397 3056 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
CroccQ8CJ40 Cyp4f41-ps-201ENSMUST00000126790 1077 ntBASIC16.31■□□□□ 0.2
CroccQ8CJ40 Pdxk-ps-203ENSMUST00000183934 680 ntTSL 3 BASIC16.31■□□□□ 0.2
CroccQ8CJ40 Gm43353-201ENSMUST00000199224 1295 ntBASIC16.31■□□□□ 0.2
CroccQ8CJ40 Gm43799-201ENSMUST00000201845 579 ntBASIC16.31■□□□□ 0.2
CroccQ8CJ40 Lsm1-201ENSMUST00000038421 2663 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CroccQ8CJ40 Fxyd6-201ENSMUST00000085939 1788 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
CroccQ8CJ40 Ddn-201ENSMUST00000075444 3740 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CroccQ8CJ40 Tmem47-203ENSMUST00000171953 1801 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CroccQ8CJ40 Eefsec-201ENSMUST00000165242 2679 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CroccQ8CJ40 Gm45774-201ENSMUST00000211992 2665 ntBASIC16.31■□□□□ 0.2
CroccQ8CJ40 Tmed3-201ENSMUST00000058488 1346 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CroccQ8CJ40 Plppr2-203ENSMUST00000190387 2608 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
CroccQ8CJ40 Cacul1-202ENSMUST00000111460 5561 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
CroccQ8CJ40 Farsa-202ENSMUST00000109754 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CroccQ8CJ40 Zfand5-201ENSMUST00000025659 2834 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CroccQ8CJ40 Ncoa5-201ENSMUST00000040381 3179 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CroccQ8CJ40 Cep170b-202ENSMUST00000101018 6641 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CroccQ8CJ40 2310002F09Rik-201ENSMUST00000181454 1607 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
CroccQ8CJ40 Ubtf-207ENSMUST00000128016 1062 ntTSL 2 BASIC16.31■□□□□ 0.2
CroccQ8CJ40 Snrnp48-202ENSMUST00000178564 847 ntTSL 5 BASIC16.31■□□□□ 0.2
CroccQ8CJ40 Pomc-204ENSMUST00000219543 1043 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CroccQ8CJ40 Rimklb-201ENSMUST00000068242 4725 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CroccQ8CJ40 Tnfrsf25-201ENSMUST00000025706 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
CroccQ8CJ40 Fiz1-208ENSMUST00000208944 2306 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CroccQ8CJ40 Psen2-205ENSMUST00000111108 1997 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
CroccQ8CJ40 Trim25-202ENSMUST00000100627 1433 ntTSL 5 BASIC16.3■□□□□ 0.2
CroccQ8CJ40 Sf1-202ENSMUST00000113487 2649 ntAPPRIS ALT1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CroccQ8CJ40 Tspan5-201ENSMUST00000029800 6653 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CroccQ8CJ40 Large2-215ENSMUST00000176810 2477 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
CroccQ8CJ40 Mtmr1-202ENSMUST00000114601 4640 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
CroccQ8CJ40 Fhl1-203ENSMUST00000114769 2770 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
CroccQ8CJ40 Tsfm-202ENSMUST00000120547 1271 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
CroccQ8CJ40 Cacna2d1-207ENSMUST00000196750 1272 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
CroccQ8CJ40 AC124601.2-201ENSMUST00000222888 759 ntTSL 2 BASIC16.3■□□□□ 0.2
CroccQ8CJ40 3110070M22Rik-201ENSMUST00000099148 1123 ntAPPRIS P1 BASIC16.3■□□□□ 0.2
CroccQ8CJ40 Taf6l-205ENSMUST00000176496 2224 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
CroccQ8CJ40 Men1-205ENSMUST00000113501 2508 ntTSL 5 BASIC16.3■□□□□ 0.2
CroccQ8CJ40 Trim14-202ENSMUST00000102924 1582 ntTSL 2 BASIC16.3■□□□□ 0.2
CroccQ8CJ40 Ccdc166-202ENSMUST00000183130 1563 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
CroccQ8CJ40 Tfdp2-206ENSMUST00000185644 2646 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
CroccQ8CJ40 Marveld1-201ENSMUST00000061111 3066 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CroccQ8CJ40 Gpd1l-201ENSMUST00000084853 1436 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
CroccQ8CJ40 Nr1d2-201ENSMUST00000090543 4663 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CroccQ8CJ40 Nudt16-201ENSMUST00000035179 1631 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CroccQ8CJ40 Tnfrsf25-202ENSMUST00000035275 1603 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
CroccQ8CJ40 Gpr161-202ENSMUST00000178700 1827 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
CroccQ8CJ40 Nptxr-201ENSMUST00000023057 5004 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
CroccQ8CJ40 Arid3b-202ENSMUST00000098686 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
CroccQ8CJ40 Gm26697-201ENSMUST00000180898 1760 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
CroccQ8CJ40 Nptn-212ENSMUST00000177292 1390 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
CroccQ8CJ40 Tmem270-201ENSMUST00000047305 932 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
CroccQ8CJ40 Asph-210ENSMUST00000108337 2836 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
CroccQ8CJ40 Ctcf-201ENSMUST00000005841 3782 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CroccQ8CJ40 Aifm1-201ENSMUST00000037349 2237 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
CroccQ8CJ40 Ppp2r2d-207ENSMUST00000155672 1938 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
CroccQ8CJ40 Fosl1-201ENSMUST00000025850 1707 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CroccQ8CJ40 Hdhd2-202ENSMUST00000097521 1716 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
CroccQ8CJ40 Hoxd4-201ENSMUST00000047904 2560 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
CroccQ8CJ40 Mpdu1-201ENSMUST00000018905 1321 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CroccQ8CJ40 Zfp277-201ENSMUST00000069637 2188 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
CroccQ8CJ40 Mmd-202ENSMUST00000107887 1654 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
CroccQ8CJ40 Pick1-206ENSMUST00000166155 1699 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CroccQ8CJ40 Gnaz-201ENSMUST00000037813 3519 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Retrieved 100 of 76,532 protein–RNA pairs in 17.4 ms