Protein–RNA interactions for Protein: Q8CI96

Clip4, CAP-Gly domain-containing linker protein 4, mousemouse

Predictions only

Length 704 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clip4Q8CI96 Whrn-201ENSMUST00000063650 4016 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Clip4Q8CI96 Col27a1-201ENSMUST00000036300 7612 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Clip4Q8CI96 Sult2b1-204ENSMUST00000209739 1858 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
Clip4Q8CI96 Dgkz-202ENSMUST00000099709 3512 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
Clip4Q8CI96 9330151L19Rik-201ENSMUST00000181850 2545 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Clip4Q8CI96 Hrh3-202ENSMUST00000163215 1401 ntTSL 5 BASIC17.22■□□□□ 0.35
Clip4Q8CI96 Nxnl1-201ENSMUST00000048243 2285 ntAPPRIS P1 TSL 2 BASIC17.22■□□□□ 0.35
Clip4Q8CI96 Mapk1-202ENSMUST00000069107 5099 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Clip4Q8CI96 Zfp446-202ENSMUST00000108535 2594 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Clip4Q8CI96 Shank3-203ENSMUST00000109309 7365 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Clip4Q8CI96 Stk35-202ENSMUST00000166282 5445 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Clip4Q8CI96 Mthfsl-201ENSMUST00000113110 801 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Clip4Q8CI96 Naa10-205ENSMUST00000114390 797 ntTSL 5 BASIC17.22■□□□□ 0.35
Clip4Q8CI96 Mthfs-203ENSMUST00000118870 705 ntTSL 3 BASIC17.22■□□□□ 0.35
Clip4Q8CI96 Gm14321-201ENSMUST00000127441 632 ntTSL 3 BASIC17.22■□□□□ 0.35
Clip4Q8CI96 Rsu1-209ENSMUST00000191959 720 ntTSL 3 BASIC17.22■□□□□ 0.35
Clip4Q8CI96 Hsbp1-202ENSMUST00000212468 638 ntAPPRIS P1 TSL 2 BASIC17.22■□□□□ 0.35
Clip4Q8CI96 Mthfs-201ENSMUST00000085256 816 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Clip4Q8CI96 Arrb2-203ENSMUST00000102563 1352 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Clip4Q8CI96 AC124581.1-201ENSMUST00000225416 1399 ntBASIC17.22■□□□□ 0.35
Clip4Q8CI96 Siglecf-202ENSMUST00000121494 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Clip4Q8CI96 Ankrd17-203ENSMUST00000168058 9311 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
Clip4Q8CI96 Clcn2-202ENSMUST00000120099 2812 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
Clip4Q8CI96 Tdh-201ENSMUST00000022522 1881 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Clip4Q8CI96 Ube2j2-213ENSMUST00000166489 3339 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Clip4Q8CI96 Zdhhc24-201ENSMUST00000006632 2558 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Clip4Q8CI96 Racgap1-213ENSMUST00000171702 3052 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Clip4Q8CI96 Casd1-201ENSMUST00000015333 3961 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Clip4Q8CI96 Neurl1a-202ENSMUST00000111808 4157 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
Clip4Q8CI96 Ric3-202ENSMUST00000120876 1633 ntAPPRIS ALT1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Clip4Q8CI96 Gpr20-201ENSMUST00000064166 2144 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Clip4Q8CI96 Fiz1-203ENSMUST00000167804 2637 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Clip4Q8CI96 Slc27a4-201ENSMUST00000080065 4054 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Clip4Q8CI96 Cacng6-202ENSMUST00000183200 1977 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Clip4Q8CI96 Grina-201ENSMUST00000023225 1693 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Clip4Q8CI96 Mtcp1-201ENSMUST00000033542 1592 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Clip4Q8CI96 C1qtnf5-202ENSMUST00000114816 1259 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Clip4Q8CI96 Insig2-203ENSMUST00000159085 1252 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Clip4Q8CI96 AC166341.7-201ENSMUST00000221698 126 ntBASIC17.21■□□□□ 0.35
Clip4Q8CI96 Zic1-202ENSMUST00000065360 2811 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Clip4Q8CI96 Zmynd15-203ENSMUST00000108563 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Clip4Q8CI96 Camk2b-202ENSMUST00000019133 2223 ntTSL 5 BASIC17.21■□□□□ 0.35
Clip4Q8CI96 Nudt17-204ENSMUST00000200387 2108 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Clip4Q8CI96 Gm15743-202ENSMUST00000182690 1901 ntBASIC17.21■□□□□ 0.35
Clip4Q8CI96 Col17a1-201ENSMUST00000026045 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Clip4Q8CI96 Abtb1-201ENSMUST00000032169 1845 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Clip4Q8CI96 Lat2-202ENSMUST00000077636 1717 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Clip4Q8CI96 Slc25a39-202ENSMUST00000107098 1606 ntAPPRIS ALT1 TSL 5 BASIC17.21■□□□□ 0.35
Clip4Q8CI96 Mlxip-202ENSMUST00000111596 2653 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Clip4Q8CI96 Tmem163-203ENSMUST00000160616 2657 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.35
Clip4Q8CI96 Sik3-204ENSMUST00000126865 6287 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
Clip4Q8CI96 Nuak1-201ENSMUST00000020220 5558 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
Clip4Q8CI96 Atp8b1-201ENSMUST00000025482 6440 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
Clip4Q8CI96 Kif7-202ENSMUST00000178048 4524 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Clip4Q8CI96 Sco1-201ENSMUST00000092996 2412 ntAPPRIS P2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Clip4Q8CI96 Elac2-202ENSMUST00000101049 2884 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
Clip4Q8CI96 AC108858.1-201ENSMUST00000228461 1498 ntBASIC17.2■□□□□ 0.34
Clip4Q8CI96 Dnajb9-201ENSMUST00000015049 2461 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Clip4Q8CI96 A330009N23Rik-201ENSMUST00000180639 1392 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Clip4Q8CI96 Gm715-201ENSMUST00000117865 831 ntBASIC17.2■□□□□ 0.34
Clip4Q8CI96 Pgap3-205ENSMUST00000128897 1264 ntTSL 5 BASIC17.2■□□□□ 0.34
Clip4Q8CI96 Creb1-203ENSMUST00000171164 1287 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Clip4Q8CI96 Smim22-201ENSMUST00000178155 429 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
Clip4Q8CI96 Gm7579-201ENSMUST00000097943 732 ntAPPRIS P1 BASIC17.2■□□□□ 0.34
Clip4Q8CI96 Srrm2-209ENSMUST00000190686 8864 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
Clip4Q8CI96 Cadps2-212ENSMUST00000163871 4969 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
Clip4Q8CI96 Asic2-201ENSMUST00000021045 3436 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Clip4Q8CI96 Ankrd17-202ENSMUST00000081914 8057 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
Clip4Q8CI96 Sfrp1-201ENSMUST00000033952 4372 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Clip4Q8CI96 Rmdn3-201ENSMUST00000094695 2249 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Clip4Q8CI96 Phb-204ENSMUST00000125172 1799 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Clip4Q8CI96 Ift74-201ENSMUST00000030311 2139 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
Clip4Q8CI96 Kcmf1-201ENSMUST00000068697 3251 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Clip4Q8CI96 Elk4-202ENSMUST00000086556 4433 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Clip4Q8CI96 Mex3a-201ENSMUST00000172699 5778 ntAPPRIS P1 TSL 2 BASIC17.19■□□□□ 0.34
Clip4Q8CI96 Hbs1l-203ENSMUST00000092674 2625 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Clip4Q8CI96 Ddn-201ENSMUST00000075444 3740 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Clip4Q8CI96 Actr3-201ENSMUST00000027579 2554 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
Clip4Q8CI96 Gata6-201ENSMUST00000047762 3194 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Clip4Q8CI96 St3gal3-203ENSMUST00000106410 2225 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Clip4Q8CI96 Sh2b1-203ENSMUST00000205440 3089 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Clip4Q8CI96 Gm3264-202ENSMUST00000166776 882 ntAPPRIS ALT2 TSL 5 BASIC17.19■□□□□ 0.34
Clip4Q8CI96 6530437J22Rik-201ENSMUST00000207515 773 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Clip4Q8CI96 Zfp787-204ENSMUST00000207628 576 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Clip4Q8CI96 Gm45337-201ENSMUST00000210537 1267 ntAPPRIS P1 BASIC17.19■□□□□ 0.34
Clip4Q8CI96 AC175538.1-201ENSMUST00000225343 1269 ntBASIC17.19■□□□□ 0.34
Clip4Q8CI96 Id1-201ENSMUST00000038368 934 ntAPPRIS P2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Clip4Q8CI96 Setdb2-202ENSMUST00000111253 1774 ntTSL 2 BASIC17.19■□□□□ 0.34
Clip4Q8CI96 Taok3-203ENSMUST00000111978 4467 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Clip4Q8CI96 Nfe2l3-201ENSMUST00000005103 2544 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Clip4Q8CI96 Ttc6-203ENSMUST00000172939 5782 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
Clip4Q8CI96 Pigt-201ENSMUST00000103101 2562 ntAPPRIS P2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Clip4Q8CI96 Lyl1-201ENSMUST00000037165 1800 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Clip4Q8CI96 Gldc-201ENSMUST00000025778 3754 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Clip4Q8CI96 Wdr86-201ENSMUST00000068693 2364 ntAPPRIS P1 TSL 2 BASIC17.18■□□□□ 0.34
Clip4Q8CI96 Lrrtm1-202ENSMUST00000159616 2541 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Clip4Q8CI96 Lrrc43-202ENSMUST00000121444 2016 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Clip4Q8CI96 Ppp1r1b-201ENSMUST00000078694 2001 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Clip4Q8CI96 Ctla2a-201ENSMUST00000021880 1373 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Clip4Q8CI96 Gm20628-201ENSMUST00000177363 3215 ntBASIC17.18■□□□□ 0.34
Retrieved 100 of 76,532 protein–RNA pairs in 60.5 ms