Protein–RNA interactions for Protein: Q8CGP0

Hist3h2bb, Histone H2B type 3-B, mousemouse

Predictions only

Length 126 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hist3h2bbQ8CGP0 Dera-201ENSMUST00000087675 1729 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Hist3h2bbQ8CGP0 1700034P13Rik-201ENSMUST00000181358 1343 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Hist3h2bbQ8CGP0 Cacna1h-202ENSMUST00000159048 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Hist3h2bbQ8CGP0 Bag4-201ENSMUST00000038498 4876 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Hist3h2bbQ8CGP0 Bicdl1-204ENSMUST00000121746 1568 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Hist3h2bbQ8CGP0 Sucla2-203ENSMUST00000160507 2229 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Hist3h2bbQ8CGP0 Slc30a2-201ENSMUST00000081094 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Hist3h2bbQ8CGP0 Arhgef11-201ENSMUST00000039476 6776 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Hist3h2bbQ8CGP0 Adam9-204ENSMUST00000208247 4044 ntAPPRIS P2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Hist3h2bbQ8CGP0 Kcna1-202ENSMUST00000203094 3150 ntAPPRIS P1 BASIC13.06□□□□□ -0.32
Hist3h2bbQ8CGP0 Acd-201ENSMUST00000042608 3154 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Hist3h2bbQ8CGP0 Rab7-203ENSMUST00000113597 1859 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Hist3h2bbQ8CGP0 Dmrt1-201ENSMUST00000025755 2340 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Hist3h2bbQ8CGP0 Coq8b-201ENSMUST00000003860 2181 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Hist3h2bbQ8CGP0 B3gat2-202ENSMUST00000140583 1737 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Hist3h2bbQ8CGP0 Pbk-201ENSMUST00000022612 1720 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Hist3h2bbQ8CGP0 Zdhhc1-201ENSMUST00000044286 1737 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Hist3h2bbQ8CGP0 Prrt2-206ENSMUST00000202045 429 ntTSL 5 BASIC13.06□□□□□ -0.32
Hist3h2bbQ8CGP0 Crct1-201ENSMUST00000029521 718 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Hist3h2bbQ8CGP0 Tmem229b-201ENSMUST00000056660 3860 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Hist3h2bbQ8CGP0 Camk2d-226ENSMUST00000199300 5524 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Hist3h2bbQ8CGP0 Chst2-201ENSMUST00000036267 7328 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Hist3h2bbQ8CGP0 Dnajc6-205ENSMUST00000106933 5191 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Hist3h2bbQ8CGP0 Foxg1-204ENSMUST00000179669 3973 ntAPPRIS P1 BASIC13.06□□□□□ -0.32
Hist3h2bbQ8CGP0 Tspoap1-202ENSMUST00000100644 7390 ntAPPRIS ALT2 TSL 5 BASIC13.06□□□□□ -0.32
Hist3h2bbQ8CGP0 Prob1-201ENSMUST00000097619 3021 ntBASIC13.06□□□□□ -0.32
Hist3h2bbQ8CGP0 Dclk2-208ENSMUST00000194452 2066 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Hist3h2bbQ8CGP0 Vmn1r17-204ENSMUST00000228294 2084 ntAPPRIS ALT2 BASIC13.06□□□□□ -0.32
Hist3h2bbQ8CGP0 Mapk8ip3-201ENSMUST00000088345 5543 ntAPPRIS P3 TSL 1 (best) BASIC13.06□□□□□ -0.32
Hist3h2bbQ8CGP0 Fam171b-201ENSMUST00000051454 5614 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Hist3h2bbQ8CGP0 Agbl3-204ENSMUST00000115016 3734 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Hist3h2bbQ8CGP0 9430060I03Rik-201ENSMUST00000191563 1689 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Hist3h2bbQ8CGP0 Gm43072-201ENSMUST00000200283 1671 ntBASIC13.05□□□□□ -0.32
Hist3h2bbQ8CGP0 Cdkn2d-203ENSMUST00000215619 1423 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Hist3h2bbQ8CGP0 Naa50-203ENSMUST00000159514 3756 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Hist3h2bbQ8CGP0 Ppp1r3d-201ENSMUST00000058678 3267 ntAPPRIS P1 BASIC13.05□□□□□ -0.32
Hist3h2bbQ8CGP0 Rasgef1b-206ENSMUST00000161516 2523 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Hist3h2bbQ8CGP0 Nedd4l-202ENSMUST00000163516 8163 ntAPPRIS P1 TSL 5 BASIC13.05□□□□□ -0.32
Hist3h2bbQ8CGP0 Ccdc158-204ENSMUST00000151180 3352 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Hist3h2bbQ8CGP0 Plekhf1-201ENSMUST00000098513 5263 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Hist3h2bbQ8CGP0 Ptgs1-201ENSMUST00000062069 2867 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Hist3h2bbQ8CGP0 Fam126a-201ENSMUST00000030849 5659 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Hist3h2bbQ8CGP0 Ier2-201ENSMUST00000060427 1522 ntAPPRIS P1 BASIC13.05□□□□□ -0.32
Hist3h2bbQ8CGP0 Gm39027-201ENSMUST00000208560 2942 ntTSL 5 BASIC13.05□□□□□ -0.32
Hist3h2bbQ8CGP0 Nhs-201ENSMUST00000081569 4881 ntAPPRIS P3 TSL 1 (best) BASIC13.05□□□□□ -0.32
Hist3h2bbQ8CGP0 Slmap-203ENSMUST00000102956 5476 ntAPPRIS P3 TSL 5 BASIC13.05□□□□□ -0.32
Hist3h2bbQ8CGP0 Capn15-205ENSMUST00000212520 5216 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Hist3h2bbQ8CGP0 1700016H13Rik-203ENSMUST00000120108 797 ntAPPRIS P1 TSL 2 BASIC13.05□□□□□ -0.32
Hist3h2bbQ8CGP0 Agfg1-208ENSMUST00000190052 2991 ntTSL 5 BASIC13.05□□□□□ -0.32
Hist3h2bbQ8CGP0 Mgat1-201ENSMUST00000081794 2976 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Hist3h2bbQ8CGP0 Zfp202-203ENSMUST00000168832 3329 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Hist3h2bbQ8CGP0 Gypc-203ENSMUST00000174459 2180 ntAPPRIS P3 TSL 1 (best) BASIC13.05□□□□□ -0.32
Hist3h2bbQ8CGP0 Cadm2-203ENSMUST00000120898 2768 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Hist3h2bbQ8CGP0 Gm16759-204ENSMUST00000191455 4272 ntTSL 5 BASIC13.05□□□□□ -0.32
Hist3h2bbQ8CGP0 Il15ra-201ENSMUST00000078834 1600 ntAPPRIS P3 TSL 5 BASIC13.05□□□□□ -0.32
Hist3h2bbQ8CGP0 Osbpl1a-205ENSMUST00000119512 1947 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Hist3h2bbQ8CGP0 Poli-201ENSMUST00000043286 2591 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Hist3h2bbQ8CGP0 Hspa1a-201ENSMUST00000087328 2967 ntAPPRIS P1 BASIC13.05□□□□□ -0.32
Hist3h2bbQ8CGP0 Ss18-203ENSMUST00000092041 2997 ntAPPRIS ALT1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Hist3h2bbQ8CGP0 Elf2-202ENSMUST00000091144 2366 ntTSL 5 BASIC13.05□□□□□ -0.32
Hist3h2bbQ8CGP0 Csnk1g1-212ENSMUST00000206048 2073 ntAPPRIS ALT2 TSL 5 BASIC13.04□□□□□ -0.32
Hist3h2bbQ8CGP0 Esco1-202ENSMUST00000097670 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Hist3h2bbQ8CGP0 Ehd4-201ENSMUST00000028755 3730 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Hist3h2bbQ8CGP0 Sytl3-201ENSMUST00000097430 2100 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Hist3h2bbQ8CGP0 Ppp1r37-201ENSMUST00000058444 3816 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Hist3h2bbQ8CGP0 Sars2-201ENSMUST00000094632 1868 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Hist3h2bbQ8CGP0 Gm26891-201ENSMUST00000181644 2599 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Hist3h2bbQ8CGP0 Pld2-203ENSMUST00000108557 3655 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Hist3h2bbQ8CGP0 Fnbp1-205ENSMUST00000113552 1910 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Hist3h2bbQ8CGP0 Klhdc8b-207ENSMUST00000193286 2956 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Hist3h2bbQ8CGP0 Ppp1r2-201ENSMUST00000060188 4078 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Hist3h2bbQ8CGP0 Nfe2-210ENSMUST00000156927 1608 ntAPPRIS P1 TSL 5 BASIC13.04□□□□□ -0.32
Hist3h2bbQ8CGP0 Rem2-201ENSMUST00000164697 1194 ntTSL 5 BASIC13.04□□□□□ -0.32
Hist3h2bbQ8CGP0 Chrna4-201ENSMUST00000067120 4565 ntAPPRIS P2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Hist3h2bbQ8CGP0 Ubr2-201ENSMUST00000113335 5691 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Hist3h2bbQ8CGP0 Neto1-201ENSMUST00000058829 3531 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Hist3h2bbQ8CGP0 Hacd4-201ENSMUST00000030221 2089 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Hist3h2bbQ8CGP0 6430548M08Rik-204ENSMUST00000108951 5531 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Hist3h2bbQ8CGP0 Ret-202ENSMUST00000088790 4497 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Hist3h2bbQ8CGP0 Dab2ip-202ENSMUST00000091010 6455 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Hist3h2bbQ8CGP0 Casp8-204ENSMUST00000191201 1849 ntAPPRIS ALT2 TSL 5 BASIC13.04□□□□□ -0.32
Hist3h2bbQ8CGP0 Rfx5-207ENSMUST00000137088 4333 ntAPPRIS P1 TSL 5 BASIC13.04□□□□□ -0.32
Hist3h2bbQ8CGP0 Zfp142-201ENSMUST00000027315 6480 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Hist3h2bbQ8CGP0 Tmem248-202ENSMUST00000111298 3570 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Hist3h2bbQ8CGP0 Usp43-202ENSMUST00000108677 4447 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Hist3h2bbQ8CGP0 Mllt1-201ENSMUST00000025053 3608 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Hist3h2bbQ8CGP0 Bicd2-203ENSMUST00000110085 4588 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Hist3h2bbQ8CGP0 Nisch-208ENSMUST00000165981 2415 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Hist3h2bbQ8CGP0 Washc1-201ENSMUST00000072383 2904 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Hist3h2bbQ8CGP0 Stk40-201ENSMUST00000094761 3492 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Hist3h2bbQ8CGP0 Spg7-201ENSMUST00000108868 845 ntTSL 2 BASIC13.03□□□□□ -0.32
Hist3h2bbQ8CGP0 March5-202ENSMUST00000112391 1293 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Hist3h2bbQ8CGP0 Kiss1-202ENSMUST00000178033 496 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Hist3h2bbQ8CGP0 Gm16437-201ENSMUST00000025669 507 ntBASIC13.03□□□□□ -0.32
Hist3h2bbQ8CGP0 Dnajc7-201ENSMUST00000014339 2330 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Hist3h2bbQ8CGP0 Tsen34-202ENSMUST00000108627 1319 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Hist3h2bbQ8CGP0 Six3os1-212ENSMUST00000177220 5601 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Hist3h2bbQ8CGP0 Tatdn2-202ENSMUST00000113022 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Hist3h2bbQ8CGP0 AC125311.2-201ENSMUST00000227477 1940 ntBASIC13.03□□□□□ -0.32
Hist3h2bbQ8CGP0 Rbm12b2-202ENSMUST00000095143 3147 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Retrieved 100 of 76,532 protein–RNA pairs in 17.2 ms