Protein–RNA interactions for Protein: Q8C7R7

Rfx6, DNA-binding protein RFX6, mousemouse

Predictions only

Length 927 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfx6Q8C7R7 Gucd1-211ENSMUST00000219774 806 ntTSL 3 BASIC17.41■□□□□ 0.38
Rfx6Q8C7R7 Fabp3-201ENSMUST00000070532 823 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Rfx6Q8C7R7 Lrch3-203ENSMUST00000135193 2794 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
Rfx6Q8C7R7 Acsl3-205ENSMUST00000142704 2976 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Rfx6Q8C7R7 Il6st-208ENSMUST00000184311 2985 ntAPPRIS P2 TSL 5 BASIC17.41■□□□□ 0.38
Rfx6Q8C7R7 Gata5os-201ENSMUST00000069943 1678 ntTSL 2 BASIC17.41■□□□□ 0.38
Rfx6Q8C7R7 Haglr-201ENSMUST00000100000 2085 ntBASIC17.41■□□□□ 0.38
Rfx6Q8C7R7 Tacc1-201ENSMUST00000084030 7788 ntAPPRIS P4 TSL 1 (best) BASIC17.41■□□□□ 0.38
Rfx6Q8C7R7 Nploc4-202ENSMUST00000103017 4025 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Rfx6Q8C7R7 Nat8l-201ENSMUST00000056355 6529 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Rfx6Q8C7R7 Marveld1-201ENSMUST00000061111 3066 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Rfx6Q8C7R7 9330151L19Rik-201ENSMUST00000181850 2545 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Rfx6Q8C7R7 Coro2a-202ENSMUST00000107756 4154 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
Rfx6Q8C7R7 Nudt4-201ENSMUST00000020217 3210 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Rfx6Q8C7R7 Rexo1-201ENSMUST00000057910 5250 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Rfx6Q8C7R7 Col18a1-202ENSMUST00000081654 5063 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Rfx6Q8C7R7 Clip2-202ENSMUST00000100647 4994 ntAPPRIS P4 TSL 1 (best) BASIC17.4■□□□□ 0.38
Rfx6Q8C7R7 Atp2b2-201ENSMUST00000089003 7067 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
Rfx6Q8C7R7 2810425M01Rik-201ENSMUST00000180790 1850 ntTSL 5 BASIC17.4■□□□□ 0.38
Rfx6Q8C7R7 Brpf1-202ENSMUST00000113119 4826 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Rfx6Q8C7R7 Simc1-202ENSMUST00000121401 4819 ntAPPRIS P2 TSL 5 BASIC17.4■□□□□ 0.38
Rfx6Q8C7R7 Lrrtm1-202ENSMUST00000159616 2541 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Rfx6Q8C7R7 Lrp12-202ENSMUST00000110305 4244 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Rfx6Q8C7R7 Ptpro-203ENSMUST00000167679 5096 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Rfx6Q8C7R7 Ppfibp1-201ENSMUST00000016631 4851 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
Rfx6Q8C7R7 Gm15375-201ENSMUST00000119510 849 ntBASIC17.4■□□□□ 0.38
Rfx6Q8C7R7 Tpsg1-204ENSMUST00000160920 867 ntTSL 3 BASIC17.4■□□□□ 0.38
Rfx6Q8C7R7 Gm6576-201ENSMUST00000169678 883 ntBASIC17.4■□□□□ 0.38
Rfx6Q8C7R7 Gm29257-201ENSMUST00000186115 639 ntBASIC17.4■□□□□ 0.38
Rfx6Q8C7R7 Arntl-204ENSMUST00000210238 2976 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
Rfx6Q8C7R7 Hsbp1-202ENSMUST00000212468 638 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
Rfx6Q8C7R7 Tpsb2-201ENSMUST00000069616 1081 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Rfx6Q8C7R7 Rara-202ENSMUST00000107473 3238 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Rfx6Q8C7R7 Zdhhc6-207ENSMUST00000224897 2168 ntAPPRIS P1 BASIC17.4■□□□□ 0.38
Rfx6Q8C7R7 Pdgfa-201ENSMUST00000046901 1543 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Rfx6Q8C7R7 Ctsf-201ENSMUST00000119694 1975 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Rfx6Q8C7R7 Tubb4b-ps1-201ENSMUST00000179460 1336 ntBASIC17.4■□□□□ 0.38
Rfx6Q8C7R7 Snrnp48-201ENSMUST00000091641 1785 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Rfx6Q8C7R7 Eefsec-201ENSMUST00000165242 2679 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Rfx6Q8C7R7 Syngap1-204ENSMUST00000194598 6011 ntAPPRIS P2 TSL 5 BASIC17.4■□□□□ 0.38
Rfx6Q8C7R7 Smurf2-201ENSMUST00000092517 3125 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Rfx6Q8C7R7 Rnf128-201ENSMUST00000113026 2750 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Rfx6Q8C7R7 Lrch3-211ENSMUST00000170899 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Rfx6Q8C7R7 Kcna6-204ENSMUST00000185333 5836 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
Rfx6Q8C7R7 Gm27029-201ENSMUST00000107257 1898 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.38
Rfx6Q8C7R7 Adgra3-201ENSMUST00000030971 4480 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
Rfx6Q8C7R7 Gm43859-201ENSMUST00000200075 1412 ntBASIC17.39■□□□□ 0.38
Rfx6Q8C7R7 Negr1-203ENSMUST00000106065 1953 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Rfx6Q8C7R7 Mbp-201ENSMUST00000047865 2492 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Rfx6Q8C7R7 Fgfr1-214ENSMUST00000178276 4741 ntTSL 5 BASIC17.39■□□□□ 0.37
Rfx6Q8C7R7 Polr3e-203ENSMUST00000207481 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Rfx6Q8C7R7 Myo9b-206ENSMUST00000212935 6316 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.37
Rfx6Q8C7R7 Spi1-201ENSMUST00000002180 2034 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Rfx6Q8C7R7 Gm8773-201ENSMUST00000101627 1268 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Rfx6Q8C7R7 Gm5901-201ENSMUST00000106805 1140 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
Rfx6Q8C7R7 Arl4aos-201ENSMUST00000135883 748 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Rfx6Q8C7R7 Aldh1a3-204ENSMUST00000174215 1066 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Rfx6Q8C7R7 1700003N22Rik-201ENSMUST00000194834 808 ntBASIC17.39■□□□□ 0.37
Rfx6Q8C7R7 Mrps10-201ENSMUST00000060752 1109 ntTSL 5 BASIC17.39■□□□□ 0.37
Rfx6Q8C7R7 Tex264-203ENSMUST00000169068 1364 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Rfx6Q8C7R7 Gm11841-201ENSMUST00000117060 1963 ntBASIC17.39■□□□□ 0.37
Rfx6Q8C7R7 Tnfsf13-201ENSMUST00000018896 1407 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Rfx6Q8C7R7 Aifm2-201ENSMUST00000067857 1442 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Rfx6Q8C7R7 Rhot2-201ENSMUST00000043897 3189 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Rfx6Q8C7R7 Gbx1-201ENSMUST00000088311 3475 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Rfx6Q8C7R7 Phtf1-201ENSMUST00000055425 3060 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Rfx6Q8C7R7 Guf1-202ENSMUST00000087228 3433 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Rfx6Q8C7R7 Ctcf-201ENSMUST00000005841 3782 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Rfx6Q8C7R7 Ndufa6-201ENSMUST00000023085 560 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Rfx6Q8C7R7 Izumo2-201ENSMUST00000085422 632 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Rfx6Q8C7R7 Mybl2-201ENSMUST00000018005 3651 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Rfx6Q8C7R7 Rpf1-201ENSMUST00000029838 1661 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Rfx6Q8C7R7 Cap1-202ENSMUST00000106255 2737 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Rfx6Q8C7R7 Gprc5c-203ENSMUST00000122967 1709 ntTSL 5 BASIC17.38■□□□□ 0.37
Rfx6Q8C7R7 Tnks-201ENSMUST00000033929 9163 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Rfx6Q8C7R7 Tia1-203ENSMUST00000095754 1789 ntAPPRIS ALT1 TSL 5 BASIC17.38■□□□□ 0.37
Rfx6Q8C7R7 Rprm-201ENSMUST00000100089 1460 ntAPPRIS P1 BASIC17.37■□□□□ 0.37
Rfx6Q8C7R7 Ssu72-201ENSMUST00000030905 1472 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Rfx6Q8C7R7 Ptpdc1-201ENSMUST00000035824 4402 ntAPPRIS P2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Rfx6Q8C7R7 Plppr2-203ENSMUST00000190387 2608 ntAPPRIS P2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Rfx6Q8C7R7 Gm16835-201ENSMUST00000140488 2809 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Rfx6Q8C7R7 Tle3-211ENSMUST00000161689 2836 ntTSL 2 BASIC17.37■□□□□ 0.37
Rfx6Q8C7R7 Tm9sf1-205ENSMUST00000122358 2517 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Rfx6Q8C7R7 Gm12933-201ENSMUST00000120203 872 ntBASIC17.37■□□□□ 0.37
Rfx6Q8C7R7 Ndufa12-204ENSMUST00000179990 566 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Rfx6Q8C7R7 Gm30085-201ENSMUST00000209694 594 ntTSL 3 BASIC17.37■□□□□ 0.37
Rfx6Q8C7R7 Gng10-201ENSMUST00000041160 1192 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Rfx6Q8C7R7 Rps16-201ENSMUST00000082134 1109 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Rfx6Q8C7R7 Ypel1-202ENSMUST00000090199 631 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Rfx6Q8C7R7 Vps37a-201ENSMUST00000098817 6379 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Rfx6Q8C7R7 Chmp2b-201ENSMUST00000004965 1838 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Rfx6Q8C7R7 Rilpl2-201ENSMUST00000031347 1391 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Rfx6Q8C7R7 Rapgef3-207ENSMUST00000134885 1422 ntTSL 5 BASIC17.37■□□□□ 0.37
Rfx6Q8C7R7 Ntng1-207ENSMUST00000131027 1485 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Rfx6Q8C7R7 Ntng1-209ENSMUST00000138344 1452 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Rfx6Q8C7R7 Gm45560-201ENSMUST00000211492 1472 ntBASIC17.37■□□□□ 0.37
Rfx6Q8C7R7 Smim3-201ENSMUST00000042710 1984 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Rfx6Q8C7R7 Casd1-201ENSMUST00000015333 3961 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Rfx6Q8C7R7 Rbm12b1-202ENSMUST00000069128 3069 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Rfx6Q8C7R7 Tbc1d9-201ENSMUST00000034145 4631 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Retrieved 100 of 76,532 protein–RNA pairs in 28.9 ms