Protein–RNA interactions for Protein: Q8C3B8

Rft1, Protein RFT1 homolog, mousemouse

Predictions only

Length 541 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rft1Q8C3B8 Anks1b-225ENSMUST00000182966 1625 ntTSL 5 BASIC15.28■□□□□ 0.04
Rft1Q8C3B8 Nudt4-201ENSMUST00000020217 3210 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Rft1Q8C3B8 Casc3-201ENSMUST00000017384 3963 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
Rft1Q8C3B8 Efna4-201ENSMUST00000029674 1599 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Rft1Q8C3B8 Nek1-202ENSMUST00000120689 5478 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Rft1Q8C3B8 Elmo2-204ENSMUST00000103088 3052 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
Rft1Q8C3B8 Gm6209-202ENSMUST00000194629 1506 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Rft1Q8C3B8 Mbip-201ENSMUST00000021416 1512 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Rft1Q8C3B8 Arhgef11-201ENSMUST00000039476 6776 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Rft1Q8C3B8 Tsc22d1-214ENSMUST00000177207 1476 ntTSL 3 BASIC15.28■□□□□ 0.04
Rft1Q8C3B8 Pitx2-207ENSMUST00000174661 1942 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
Rft1Q8C3B8 Alad-202ENSMUST00000107444 1247 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Rft1Q8C3B8 Pigp-202ENSMUST00000113906 745 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Rft1Q8C3B8 Arl6ip4-202ENSMUST00000122394 982 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
Rft1Q8C3B8 Tnfaip8-208ENSMUST00000148989 1002 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
Rft1Q8C3B8 AC140264.2-202ENSMUST00000218746 817 ntBASIC15.28■□□□□ 0.04
Rft1Q8C3B8 Nfu1-201ENSMUST00000032060 948 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
Rft1Q8C3B8 Bricd5-201ENSMUST00000054946 997 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Rft1Q8C3B8 Vegfc-201ENSMUST00000033919 2449 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Rft1Q8C3B8 Ssfa2-201ENSMUST00000111784 4999 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
Rft1Q8C3B8 Kank3-202ENSMUST00000172649 2652 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Rft1Q8C3B8 Gm45774-201ENSMUST00000211992 2665 ntBASIC15.28■□□□□ 0.04
Rft1Q8C3B8 Wnt10b-202ENSMUST00000166022 1594 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Rft1Q8C3B8 Anks1-201ENSMUST00000025058 6844 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Rft1Q8C3B8 Lrrc45-201ENSMUST00000026139 2492 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Rft1Q8C3B8 Dscc1-202ENSMUST00000110231 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
Rft1Q8C3B8 Itm2c-203ENSMUST00000185569 1465 ntTSL 5 BASIC15.27■□□□□ 0.04
Rft1Q8C3B8 Yipf2-204ENSMUST00000213809 1883 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Rft1Q8C3B8 Nsfl1c-203ENSMUST00000103160 1369 ntTSL 5 BASIC15.27■□□□□ 0.04
Rft1Q8C3B8 Lsm1-201ENSMUST00000038421 2663 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Rft1Q8C3B8 Hikeshi-206ENSMUST00000153470 2224 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Rft1Q8C3B8 Tha1-201ENSMUST00000033230 1770 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Rft1Q8C3B8 Gbp5-201ENSMUST00000090127 3055 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Rft1Q8C3B8 Slc35e3-201ENSMUST00000079041 3489 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Rft1Q8C3B8 Tfdp2-209ENSMUST00000188750 1713 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.04
Rft1Q8C3B8 B230208B08Rik-201ENSMUST00000173049 404 ntTSL 3 BASIC15.27■□□□□ 0.04
Rft1Q8C3B8 AA465934-203ENSMUST00000177150 383 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Rft1Q8C3B8 Gm37856-201ENSMUST00000191634 999 ntBASIC15.27■□□□□ 0.04
Rft1Q8C3B8 AC135637.1-201ENSMUST00000227750 365 ntBASIC15.27■□□□□ 0.04
Rft1Q8C3B8 Rps16-201ENSMUST00000082134 1109 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Rft1Q8C3B8 A330074K22Rik-201ENSMUST00000183235 2489 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
Rft1Q8C3B8 Sfmbt1-201ENSMUST00000054230 7837 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.03
Rft1Q8C3B8 Txndc5-201ENSMUST00000035988 2843 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
Rft1Q8C3B8 Lrrc47-205ENSMUST00000169622 3468 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Rft1Q8C3B8 Dok7-202ENSMUST00000101298 2443 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Rft1Q8C3B8 Rilpl2-201ENSMUST00000031347 1391 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Rft1Q8C3B8 Plekhh3-206ENSMUST00000164474 3010 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Rft1Q8C3B8 Rpf1-203ENSMUST00000199079 1978 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Rft1Q8C3B8 Usp53-201ENSMUST00000090379 6185 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Rft1Q8C3B8 Snca-201ENSMUST00000114268 1280 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Rft1Q8C3B8 Cfl1-201ENSMUST00000116560 1148 ntTSL 5 BASIC15.26■□□□□ 0.03
Rft1Q8C3B8 D930007J09Rik-201ENSMUST00000057911 393 ntAPPRIS P1 BASIC15.26■□□□□ 0.03
Rft1Q8C3B8 Prrg2-201ENSMUST00000007981 1295 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Rft1Q8C3B8 Nespas-203ENSMUST00000151472 2248 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Rft1Q8C3B8 Foxp4-203ENSMUST00000113263 3156 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
Rft1Q8C3B8 Flt1-202ENSMUST00000031653 6895 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Rft1Q8C3B8 Nkpd1-201ENSMUST00000078908 2753 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Rft1Q8C3B8 Gm1043-204ENSMUST00000207866 4296 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
Rft1Q8C3B8 Chd3-201ENSMUST00000092971 6066 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
Rft1Q8C3B8 Vsig10-201ENSMUST00000086464 2052 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
Rft1Q8C3B8 Tmem145-202ENSMUST00000119703 1781 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
Rft1Q8C3B8 Nsmf-201ENSMUST00000006646 2922 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
Rft1Q8C3B8 Gbe1-201ENSMUST00000023393 2846 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
Rft1Q8C3B8 Plekha8-202ENSMUST00000119706 6739 ntAPPRIS P1 TSL 2 BASIC15.25■□□□□ 0.03
Rft1Q8C3B8 Ltbp1-201ENSMUST00000001927 6671 ntTSL 5 BASIC15.25■□□□□ 0.03
Rft1Q8C3B8 Cep152-201ENSMUST00000089776 5768 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Rft1Q8C3B8 Kcnq2-217ENSMUST00000149964 8209 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Rft1Q8C3B8 Eif4g3-203ENSMUST00000084215 8134 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
Rft1Q8C3B8 Mag-203ENSMUST00000187137 2434 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Rft1Q8C3B8 Pacsin3-215ENSMUST00000168916 1859 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Rft1Q8C3B8 Pacsin3-201ENSMUST00000028694 1862 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Rft1Q8C3B8 Tmem51os1-202ENSMUST00000141769 2131 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Rft1Q8C3B8 Atg4c-201ENSMUST00000030279 3178 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Rft1Q8C3B8 Utp18-201ENSMUST00000066888 2613 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Rft1Q8C3B8 Tgfbr2-202ENSMUST00000061101 8092 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Rft1Q8C3B8 Gm19554-201ENSMUST00000220934 2076 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Rft1Q8C3B8 Atf6b-202ENSMUST00000173984 2315 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
Rft1Q8C3B8 Phtf1-201ENSMUST00000055425 3060 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Rft1Q8C3B8 Alcam-206ENSMUST00000168071 878 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Rft1Q8C3B8 Trmt13-210ENSMUST00000198454 880 ntBASIC15.25■□□□□ 0.03
Rft1Q8C3B8 Cacng6-202ENSMUST00000183200 1977 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Rft1Q8C3B8 Gpr137-201ENSMUST00000025909 1717 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Rft1Q8C3B8 Evx1-201ENSMUST00000031787 2877 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Rft1Q8C3B8 D730003I15Rik-202ENSMUST00000194375 1667 ntBASIC15.25■□□□□ 0.03
Rft1Q8C3B8 D17Wsu92e-203ENSMUST00000114863 3828 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
Rft1Q8C3B8 Gm45472-201ENSMUST00000211295 1426 ntTSL 5 BASIC15.25■□□□□ 0.03
Rft1Q8C3B8 Dio3-201ENSMUST00000097228 1449 ntBASIC15.25■□□□□ 0.03
Rft1Q8C3B8 Gm44443-201ENSMUST00000204396 5633 ntBASIC15.25■□□□□ 0.03
Rft1Q8C3B8 Noxa1-201ENSMUST00000044018 1617 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
Rft1Q8C3B8 Poglut1-201ENSMUST00000036210 2758 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Rft1Q8C3B8 Lrrtm1-202ENSMUST00000159616 2541 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Rft1Q8C3B8 Ankrd44-210ENSMUST00000179030 6140 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Rft1Q8C3B8 Lmbr1-207ENSMUST00000200564 1598 ntTSL 5 BASIC15.24■□□□□ 0.03
Rft1Q8C3B8 Rrp9-201ENSMUST00000047721 1586 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Rft1Q8C3B8 Bri3bp-201ENSMUST00000049040 6473 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Rft1Q8C3B8 Dtwd2-203ENSMUST00000163590 2857 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Rft1Q8C3B8 Lbp-202ENSMUST00000109491 1322 ntTSL 2 BASIC15.24■□□□□ 0.03
Rft1Q8C3B8 Rbm12b1-202ENSMUST00000069128 3069 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Rft1Q8C3B8 Hps5-202ENSMUST00000107653 4702 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Rft1Q8C3B8 1810013L24Rik-201ENSMUST00000023150 4066 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Retrieved 100 of 76,532 protein–RNA pairs in 47 ms