Protein–RNA interactions for Protein: Q8BR65

Suds3, Sin3 histone deacetylase corepressor complex component SDS3, mousemouse

Predictions only

Length 328 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Suds3Q8BR65 Kat14-208ENSMUST00000147747 3299 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Suds3Q8BR65 Mbnl1-201ENSMUST00000099087 5655 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Suds3Q8BR65 1810013L24Rik-201ENSMUST00000023150 4066 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Suds3Q8BR65 Kank3-201ENSMUST00000048560 2641 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Suds3Q8BR65 Sart3-201ENSMUST00000019118 4447 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Suds3Q8BR65 Lpin2-213ENSMUST00000156570 1586 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Suds3Q8BR65 Dut-201ENSMUST00000051605 1950 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Suds3Q8BR65 Auh-202ENSMUST00000110031 3235 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Suds3Q8BR65 Gm27029-202ENSMUST00000107259 1855 ntAPPRIS P5 TSL 5 BASIC17.56■□□□□ 0.4
Suds3Q8BR65 Rab11fip3-202ENSMUST00000120691 5103 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Suds3Q8BR65 Ankdd1a-201ENSMUST00000061766 1443 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
Suds3Q8BR65 Phb-204ENSMUST00000125172 1799 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Suds3Q8BR65 Tpm1-204ENSMUST00000113684 887 ntTSL 5 BASIC17.56■□□□□ 0.4
Suds3Q8BR65 Creb1-203ENSMUST00000171164 1287 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Suds3Q8BR65 AL672049.1-201ENSMUST00000197943 91 ntBASIC17.56■□□□□ 0.4
Suds3Q8BR65 Gm42545-201ENSMUST00000202755 922 ntBASIC17.56■□□□□ 0.4
Suds3Q8BR65 Gm29791-202ENSMUST00000207888 369 ntBASIC17.56■□□□□ 0.4
Suds3Q8BR65 Olfr1411-201ENSMUST00000073748 972 ntAPPRIS P1 BASIC17.56■□□□□ 0.4
Suds3Q8BR65 Ubfd1-201ENSMUST00000033158 4849 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Suds3Q8BR65 Zfp119b-201ENSMUST00000056147 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Suds3Q8BR65 1700041G16Rik-202ENSMUST00000186344 1824 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Suds3Q8BR65 Mipol1-201ENSMUST00000123498 2117 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
Suds3Q8BR65 Tigd3-201ENSMUST00000055911 2114 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Suds3Q8BR65 Vps37a-201ENSMUST00000098817 6379 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Suds3Q8BR65 Bcat2-201ENSMUST00000033098 1772 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Suds3Q8BR65 Sash1-201ENSMUST00000015449 7183 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Suds3Q8BR65 Tubgcp4-203ENSMUST00000110658 4250 ntAPPRIS ALT1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Suds3Q8BR65 Rapgef3-207ENSMUST00000134885 1422 ntTSL 5 BASIC17.55■□□□□ 0.4
Suds3Q8BR65 Fam199x-201ENSMUST00000047852 8299 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Suds3Q8BR65 Ndor1-202ENSMUST00000114349 2336 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Suds3Q8BR65 Wnt4-201ENSMUST00000045747 4194 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Suds3Q8BR65 Card10-203ENSMUST00000170584 3220 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
Suds3Q8BR65 Gm26885-201ENSMUST00000181920 1688 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Suds3Q8BR65 Synpo-205ENSMUST00000130044 4970 ntAPPRIS P3 TSL 2 BASIC17.55■□□□□ 0.4
Suds3Q8BR65 4930432B10Rik-202ENSMUST00000181330 1612 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Suds3Q8BR65 Bend4-201ENSMUST00000169190 7935 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
Suds3Q8BR65 Zfp697-202ENSMUST00000178372 4703 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
Suds3Q8BR65 Mir1199-201ENSMUST00000117015 119 ntBASIC17.55■□□□□ 0.4
Suds3Q8BR65 Cacna2d2-203ENSMUST00000164988 5542 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
Suds3Q8BR65 Rsu1-209ENSMUST00000191959 720 ntTSL 3 BASIC17.55■□□□□ 0.4
Suds3Q8BR65 Nme4-201ENSMUST00000025007 912 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Suds3Q8BR65 Ubac2-201ENSMUST00000039803 2139 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Suds3Q8BR65 Arl1-202ENSMUST00000116234 2080 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Suds3Q8BR65 Car2-201ENSMUST00000029078 1788 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Suds3Q8BR65 Polr3d-201ENSMUST00000000793 2016 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Suds3Q8BR65 Btbd11-203ENSMUST00000105307 5788 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
Suds3Q8BR65 Mpig6b-201ENSMUST00000097337 2252 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Suds3Q8BR65 Klf14-201ENSMUST00000101589 3056 ntAPPRIS P1 BASIC17.55■□□□□ 0.4
Suds3Q8BR65 Mief1-203ENSMUST00000228788 5352 ntAPPRIS P1 BASIC17.55■□□□□ 0.4
Suds3Q8BR65 Cyp2ab1-201ENSMUST00000023513 2720 ntTSL 5 BASIC17.55■□□□□ 0.4
Suds3Q8BR65 Nat8l-201ENSMUST00000056355 6529 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Suds3Q8BR65 Usp30-201ENSMUST00000031588 4604 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Suds3Q8BR65 Amigo2-201ENSMUST00000053106 2871 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Suds3Q8BR65 Slc11a1-201ENSMUST00000027368 2315 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Suds3Q8BR65 Lmbr1-207ENSMUST00000200564 1598 ntTSL 5 BASIC17.54■□□□□ 0.4
Suds3Q8BR65 Trmo-202ENSMUST00000086563 1554 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
Suds3Q8BR65 Mmp11-201ENSMUST00000000924 2288 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Suds3Q8BR65 Naa10-205ENSMUST00000114390 797 ntTSL 5 BASIC17.54■□□□□ 0.4
Suds3Q8BR65 Mir6349-201ENSMUST00000184059 97 ntBASIC17.54■□□□□ 0.4
Suds3Q8BR65 Mterf1a-202ENSMUST00000117463 2413 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Suds3Q8BR65 Hmces-201ENSMUST00000032141 1464 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Suds3Q8BR65 Hoxb4-201ENSMUST00000049241 2566 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Suds3Q8BR65 Acvr2a-201ENSMUST00000063886 5686 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Suds3Q8BR65 Capg-202ENSMUST00000114071 1400 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Suds3Q8BR65 Arpc4-201ENSMUST00000156898 2270 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Suds3Q8BR65 Rps6ka1-202ENSMUST00000105894 3135 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Suds3Q8BR65 Slc22a3-201ENSMUST00000024595 3501 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Suds3Q8BR65 Fubp3-202ENSMUST00000113482 3268 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Suds3Q8BR65 Guca1b-202ENSMUST00000145462 1556 ntTSL 2 BASIC17.53■□□□□ 0.4
Suds3Q8BR65 Smim10l1-201ENSMUST00000100864 2842 ntAPPRIS P1 BASIC17.53■□□□□ 0.4
Suds3Q8BR65 Syt9-201ENSMUST00000073459 3817 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Suds3Q8BR65 Dlgap1-206ENSMUST00000133717 2355 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
Suds3Q8BR65 Gm15635-204ENSMUST00000208024 2539 ntBASIC17.53■□□□□ 0.4
Suds3Q8BR65 Myb-201ENSMUST00000020158 3074 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
Suds3Q8BR65 Osgin2-201ENSMUST00000037198 2658 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Suds3Q8BR65 Vsig10l-204ENSMUST00000203769 2473 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Suds3Q8BR65 Msx2-201ENSMUST00000021922 2453 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Suds3Q8BR65 Gm44618-201ENSMUST00000208431 2262 ntTSL 3 BASIC17.53■□□□□ 0.4
Suds3Q8BR65 Mpz-202ENSMUST00000111334 1278 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Suds3Q8BR65 Dleu2-210ENSMUST00000183054 722 ntTSL 5 BASIC17.53■□□□□ 0.4
Suds3Q8BR65 2510002D24Rik-204ENSMUST00000191388 995 ntTSL 5 BASIC17.53■□□□□ 0.4
Suds3Q8BR65 Gm36736-201ENSMUST00000206060 646 ntTSL 3 BASIC17.53■□□□□ 0.4
Suds3Q8BR65 Hps4-201ENSMUST00000035279 2836 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Suds3Q8BR65 Plppr2-201ENSMUST00000046371 2626 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Suds3Q8BR65 Best2-203ENSMUST00000209421 2212 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Suds3Q8BR65 Mff-208ENSMUST00000160786 1645 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Suds3Q8BR65 Stard7-202ENSMUST00000110375 3116 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Suds3Q8BR65 Kmt5c-201ENSMUST00000098853 2189 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Suds3Q8BR65 Krt86-201ENSMUST00000088049 1960 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Suds3Q8BR65 Ecel1-201ENSMUST00000027463 2695 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Suds3Q8BR65 Rev1-201ENSMUST00000027251 4262 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Suds3Q8BR65 Mff-202ENSMUST00000078332 1894 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Suds3Q8BR65 Bhlhe41-201ENSMUST00000032386 6133 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Suds3Q8BR65 Adam15-203ENSMUST00000107446 1686 ntTSL 5 BASIC17.52■□□□□ 0.4
Suds3Q8BR65 4930426D05Rik-202ENSMUST00000139804 1650 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Suds3Q8BR65 Mapre3-201ENSMUST00000031058 2021 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Suds3Q8BR65 Tmed4-201ENSMUST00000004508 2003 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Suds3Q8BR65 Atox1-201ENSMUST00000108857 541 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Suds3Q8BR65 Gm13401-201ENSMUST00000117074 291 ntBASIC17.52■□□□□ 0.4
Suds3Q8BR65 Gm15723-201ENSMUST00000139331 600 ntTSL 3 BASIC17.52■□□□□ 0.4
Retrieved 100 of 76,532 protein–RNA pairs in 19.4 ms