Protein–RNA interactions for Protein: Q8BM39

Prpf18, Pre-mRNA-splicing factor 18, mousemouse

Predictions only

Length 342 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf18Q8BM39 Cep152-201ENSMUST00000089776 5768 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Prpf18Q8BM39 Mgll-203ENSMUST00000113582 1034 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Prpf18Q8BM39 Stmn4-202ENSMUST00000118426 1281 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Prpf18Q8BM39 Cystm1-201ENSMUST00000050584 831 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Prpf18Q8BM39 Tmem125-201ENSMUST00000060214 1864 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
Prpf18Q8BM39 CT010478.1-201ENSMUST00000220747 2787 ntBASIC16.3■□□□□ 0.2
Prpf18Q8BM39 Aqp1-201ENSMUST00000004774 2627 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Prpf18Q8BM39 Ntrk1-201ENSMUST00000029712 2588 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Prpf18Q8BM39 Galnt16-204ENSMUST00000218943 2047 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Prpf18Q8BM39 Antxr2-202ENSMUST00000199088 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Prpf18Q8BM39 Gm9867-201ENSMUST00000192212 2647 ntBASIC16.29■□□□□ 0.2
Prpf18Q8BM39 Gm13216-201ENSMUST00000117145 591 ntBASIC16.29■□□□□ 0.2
Prpf18Q8BM39 Speg-206ENSMUST00000122266 917 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Prpf18Q8BM39 Immp2l-203ENSMUST00000134965 977 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
Prpf18Q8BM39 Ckm-201ENSMUST00000003643 1235 ntTSL 5 BASIC16.29■□□□□ 0.2
Prpf18Q8BM39 Chrac1-201ENSMUST00000089765 871 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Prpf18Q8BM39 Relt-201ENSMUST00000008462 2851 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Prpf18Q8BM39 Naa50-204ENSMUST00000161326 4487 ntAPPRIS ALT1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Prpf18Q8BM39 Mtx1-201ENSMUST00000073572 1617 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Prpf18Q8BM39 Rab6a-201ENSMUST00000032946 3214 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
Prpf18Q8BM39 Clcn3-203ENSMUST00000093490 5518 ntAPPRIS ALT1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Prpf18Q8BM39 Hspbp1-201ENSMUST00000079970 1593 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Prpf18Q8BM39 Slc35f1-201ENSMUST00000105473 4941 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Prpf18Q8BM39 Thsd7a-202ENSMUST00000119581 5678 ntAPPRIS P2 TSL 5 BASIC16.29■□□□□ 0.2
Prpf18Q8BM39 Itgb1bp1-201ENSMUST00000076260 1874 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Prpf18Q8BM39 4930518J20Rik-201ENSMUST00000195064 1478 ntBASIC16.29■□□□□ 0.2
Prpf18Q8BM39 Ino80e-202ENSMUST00000106342 1840 ntTSL 3 BASIC16.29■□□□□ 0.2
Prpf18Q8BM39 Prpsap1-201ENSMUST00000106391 1841 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Prpf18Q8BM39 Npdc1-201ENSMUST00000055921 1412 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
Prpf18Q8BM39 Zfp281-201ENSMUST00000047734 4933 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Prpf18Q8BM39 Pard6g-201ENSMUST00000070219 3143 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Prpf18Q8BM39 Lrch3-211ENSMUST00000170899 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Prpf18Q8BM39 Rab20-201ENSMUST00000033900 1392 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Prpf18Q8BM39 Zfp668-201ENSMUST00000054415 5768 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Prpf18Q8BM39 Dancr-204ENSMUST00000132389 2347 ntBASIC16.28■□□□□ 0.2
Prpf18Q8BM39 Gm13509-201ENSMUST00000119733 1308 ntBASIC16.28■□□□□ 0.2
Prpf18Q8BM39 Stk39-201ENSMUST00000102715 3536 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Prpf18Q8BM39 Gm11627-202ENSMUST00000107081 818 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
Prpf18Q8BM39 Tmed5-204ENSMUST00000118036 1045 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Prpf18Q8BM39 Gm44899-202ENSMUST00000209433 511 ntTSL 5 BASIC16.28■□□□□ 0.2
Prpf18Q8BM39 Ltb-201ENSMUST00000025262 1160 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Prpf18Q8BM39 Nudt14-201ENSMUST00000002881 734 ntTSL 2 BASIC16.28■□□□□ 0.2
Prpf18Q8BM39 Shisa2-201ENSMUST00000053949 3119 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Prpf18Q8BM39 Gpat3-203ENSMUST00000112887 3059 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Prpf18Q8BM39 Acaa1a-201ENSMUST00000039784 1762 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Prpf18Q8BM39 Tm2d3-202ENSMUST00000065574 1478 ntAPPRIS P4 TSL 1 (best) BASIC16.28■□□□□ 0.2
Prpf18Q8BM39 Fiz1-203ENSMUST00000167804 2637 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Prpf18Q8BM39 Acot5-202ENSMUST00000072505 1401 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Prpf18Q8BM39 Sh2b1-202ENSMUST00000205340 3366 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
Prpf18Q8BM39 Pced1a-202ENSMUST00000110277 1689 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Prpf18Q8BM39 Lhfp-203ENSMUST00000147139 1932 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.2
Prpf18Q8BM39 Pcmt1-202ENSMUST00000159917 2491 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.2
Prpf18Q8BM39 Hap1-201ENSMUST00000103124 2120 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.2
Prpf18Q8BM39 Asph-204ENSMUST00000084915 2884 ntTSL 5 BASIC16.27■□□□□ 0.2
Prpf18Q8BM39 Gm26580-201ENSMUST00000181002 2095 ntTSL 5 BASIC16.27■□□□□ 0.2
Prpf18Q8BM39 Prpf40b-212ENSMUST00000145482 3308 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.2
Prpf18Q8BM39 Hist1h4a-201ENSMUST00000102964 539 ntAPPRIS P1 BASIC16.27■□□□□ 0.2
Prpf18Q8BM39 Jtb-202ENSMUST00000119304 878 ntTSL 3 BASIC16.27■□□□□ 0.2
Prpf18Q8BM39 Stard6-203ENSMUST00000168249 1167 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Prpf18Q8BM39 Gm9780-201ENSMUST00000184272 350 ntTSL 2 BASIC16.27■□□□□ 0.2
Prpf18Q8BM39 Rps2-ps11-201ENSMUST00000195283 868 ntBASIC16.27■□□□□ 0.2
Prpf18Q8BM39 Pts-208ENSMUST00000215416 439 ntTSL 2 BASIC16.27■□□□□ 0.2
Prpf18Q8BM39 Dusp15-201ENSMUST00000037715 715 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Prpf18Q8BM39 Igsf23-201ENSMUST00000043440 1908 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.19
Prpf18Q8BM39 Arhgef16-201ENSMUST00000030898 2860 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Prpf18Q8BM39 Elac2-203ENSMUST00000108697 2612 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.19
Prpf18Q8BM39 Eif2ak3-201ENSMUST00000034093 4513 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Prpf18Q8BM39 Zfp219-212ENSMUST00000228580 2812 ntAPPRIS ALT2 BASIC16.27■□□□□ 0.19
Prpf18Q8BM39 Emc8-201ENSMUST00000034277 4942 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Prpf18Q8BM39 Anapc2-201ENSMUST00000028341 3004 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Prpf18Q8BM39 Gm10532-201ENSMUST00000181913 2301 ntTSL 2 BASIC16.27■□□□□ 0.19
Prpf18Q8BM39 Mapk8ip2-201ENSMUST00000023291 5558 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Prpf18Q8BM39 Hmg20b-201ENSMUST00000020454 1621 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Prpf18Q8BM39 Dlgap1-207ENSMUST00000133983 7173 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Prpf18Q8BM39 Mybl2-201ENSMUST00000018005 3651 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Prpf18Q8BM39 Tmem170-201ENSMUST00000034431 3878 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Prpf18Q8BM39 Fam129c-208ENSMUST00000143662 2267 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
Prpf18Q8BM39 Efna4-201ENSMUST00000029674 1599 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Prpf18Q8BM39 Pole4-201ENSMUST00000095786 1769 ntAPPRIS P2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Prpf18Q8BM39 Fus-203ENSMUST00000106251 5536 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
Prpf18Q8BM39 C1qtnf12-201ENSMUST00000024338 1315 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Prpf18Q8BM39 Tmem80-206ENSMUST00000133012 1524 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Prpf18Q8BM39 Mxd4-201ENSMUST00000042701 3872 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Prpf18Q8BM39 Snph-203ENSMUST00000109875 4910 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
Prpf18Q8BM39 Nsmf-203ENSMUST00000100334 2957 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Prpf18Q8BM39 AC164629.5-201ENSMUST00000220387 632 ntBASIC16.26■□□□□ 0.19
Prpf18Q8BM39 Tdg-ps-201ENSMUST00000051363 2968 ntBASIC16.26■□□□□ 0.19
Prpf18Q8BM39 Pick1-206ENSMUST00000166155 1699 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Prpf18Q8BM39 Galnt17-202ENSMUST00000160609 2875 ntTSL 5 BASIC16.26■□□□□ 0.19
Prpf18Q8BM39 Mboat7-201ENSMUST00000038608 2878 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Prpf18Q8BM39 Akr1a1-201ENSMUST00000030455 1420 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Prpf18Q8BM39 Prr14-201ENSMUST00000033095 2402 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Prpf18Q8BM39 Wasf2-201ENSMUST00000084241 5642 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Prpf18Q8BM39 Caml-201ENSMUST00000021963 1382 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Prpf18Q8BM39 Dtx2-203ENSMUST00000111144 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Prpf18Q8BM39 Ift74-201ENSMUST00000030311 2139 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
Prpf18Q8BM39 Fbxl7-201ENSMUST00000059204 4632 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Prpf18Q8BM39 Nipsnap1-201ENSMUST00000038570 1926 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Prpf18Q8BM39 Chrna4-201ENSMUST00000067120 4565 ntAPPRIS P2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Prpf18Q8BM39 Adnp-201ENSMUST00000057793 4917 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
Retrieved 100 of 76,532 protein–RNA pairs in 37.9 ms