Protein–RNA interactions for Protein: Q8BJF9

Chmp2b, Charged multivesicular body protein 2b, mousemouse

Predictions only

Length 213 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp2bQ8BJF9 Gm10138-203ENSMUST00000206952 366 ntBASIC17.53■□□□□ 0.4
Chmp2bQ8BJF9 Mipep-201ENSMUST00000063562 3015 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Chmp2bQ8BJF9 Rhobtb2-201ENSMUST00000022665 5322 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Chmp2bQ8BJF9 Lrch3-211ENSMUST00000170899 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Chmp2bQ8BJF9 Pld2-203ENSMUST00000108557 3655 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Chmp2bQ8BJF9 9330151L19Rik-201ENSMUST00000181850 2545 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Chmp2bQ8BJF9 Gm19721-201ENSMUST00000195284 1764 ntBASIC17.53■□□□□ 0.4
Chmp2bQ8BJF9 Shroom3-201ENSMUST00000113051 6435 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Chmp2bQ8BJF9 Gm28265-201ENSMUST00000188201 2319 ntBASIC17.53■□□□□ 0.4
Chmp2bQ8BJF9 Tex264-203ENSMUST00000169068 1364 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Chmp2bQ8BJF9 Lrp5-201ENSMUST00000025856 5161 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Chmp2bQ8BJF9 Rhot2-201ENSMUST00000043897 3189 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Chmp2bQ8BJF9 Yipf2-204ENSMUST00000213809 1883 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Chmp2bQ8BJF9 Zdhhc6-207ENSMUST00000224897 2168 ntAPPRIS P1 BASIC17.52■□□□□ 0.4
Chmp2bQ8BJF9 Cdc42ep3-201ENSMUST00000068958 1967 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Chmp2bQ8BJF9 Gm11643-201ENSMUST00000119578 864 ntBASIC17.52■□□□□ 0.4
Chmp2bQ8BJF9 Izumo2-201ENSMUST00000085422 632 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Chmp2bQ8BJF9 Gng5-201ENSMUST00000090031 593 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Chmp2bQ8BJF9 Lrch3-203ENSMUST00000135193 2794 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.4
Chmp2bQ8BJF9 Kcmf1-201ENSMUST00000068697 3251 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Chmp2bQ8BJF9 Bcam-201ENSMUST00000003061 2429 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Chmp2bQ8BJF9 Asic2-201ENSMUST00000021045 3436 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Chmp2bQ8BJF9 Phtf1-201ENSMUST00000055425 3060 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
Chmp2bQ8BJF9 Tnfsf14-201ENSMUST00000005976 1859 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Chmp2bQ8BJF9 Mtfr1l-202ENSMUST00000116279 1969 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Chmp2bQ8BJF9 Wdr41-205ENSMUST00000160801 3062 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
Chmp2bQ8BJF9 Wdr41-201ENSMUST00000056512 3063 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Chmp2bQ8BJF9 Arhgap39-202ENSMUST00000077821 4494 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
Chmp2bQ8BJF9 4833418N02Rik-202ENSMUST00000146560 1495 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Chmp2bQ8BJF9 Col27a1-201ENSMUST00000036300 7612 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Chmp2bQ8BJF9 Tm9sf1-205ENSMUST00000122358 2517 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Chmp2bQ8BJF9 Cep135-202ENSMUST00000121979 5537 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
Chmp2bQ8BJF9 Gm15375-201ENSMUST00000119510 849 ntBASIC17.51■□□□□ 0.39
Chmp2bQ8BJF9 Letm1-203ENSMUST00000148451 2478 ntTSL 2 BASIC17.51■□□□□ 0.39
Chmp2bQ8BJF9 Fbxl19-204ENSMUST00000188580 2601 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Chmp2bQ8BJF9 Hsbp1-202ENSMUST00000212468 638 ntAPPRIS P1 TSL 2 BASIC17.51■□□□□ 0.39
Chmp2bQ8BJF9 Stambpl1-201ENSMUST00000054956 2024 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Chmp2bQ8BJF9 Inpp5f-201ENSMUST00000043138 4734 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Chmp2bQ8BJF9 Rilpl2-201ENSMUST00000031347 1391 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Chmp2bQ8BJF9 1190002N15Rik-201ENSMUST00000113028 3950 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Chmp2bQ8BJF9 Rftn1-201ENSMUST00000044503 4029 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Chmp2bQ8BJF9 Mapk7-201ENSMUST00000079080 3019 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Chmp2bQ8BJF9 Gm45560-201ENSMUST00000211492 1472 ntBASIC17.5■□□□□ 0.39
Chmp2bQ8BJF9 Cap1-202ENSMUST00000106255 2737 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Chmp2bQ8BJF9 Ldb1-205ENSMUST00000137771 2014 ntTSL 5 BASIC17.5■□□□□ 0.39
Chmp2bQ8BJF9 Arntl-201ENSMUST00000047321 2908 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Chmp2bQ8BJF9 Dio3-201ENSMUST00000097228 1449 ntBASIC17.5■□□□□ 0.39
Chmp2bQ8BJF9 Rhof-201ENSMUST00000031401 2208 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Chmp2bQ8BJF9 Rasal2-201ENSMUST00000078308 10047 ntAPPRIS P2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Chmp2bQ8BJF9 Gm5901-201ENSMUST00000106805 1140 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
Chmp2bQ8BJF9 Nudt8-203ENSMUST00000122924 1082 ntTSL 2 BASIC17.5■□□□□ 0.39
Chmp2bQ8BJF9 Gm6576-201ENSMUST00000169678 883 ntBASIC17.5■□□□□ 0.39
Chmp2bQ8BJF9 Aldh1a3-204ENSMUST00000174215 1066 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Chmp2bQ8BJF9 Ndufa6-201ENSMUST00000023085 560 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Chmp2bQ8BJF9 1700067K01Rik-201ENSMUST00000060357 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Chmp2bQ8BJF9 Ppan-201ENSMUST00000004203 1670 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Chmp2bQ8BJF9 Pkn1-201ENSMUST00000005616 6662 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
Chmp2bQ8BJF9 Pigt-201ENSMUST00000103101 2562 ntAPPRIS P2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Chmp2bQ8BJF9 Sh3yl1-202ENSMUST00000110880 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Chmp2bQ8BJF9 Il17re-208ENSMUST00000204774 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Chmp2bQ8BJF9 Ssu72-201ENSMUST00000030905 1472 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Chmp2bQ8BJF9 Wasf1-202ENSMUST00000105509 2719 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
Chmp2bQ8BJF9 Klf13-201ENSMUST00000063694 6396 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Chmp2bQ8BJF9 Gm16835-201ENSMUST00000140488 2809 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Chmp2bQ8BJF9 Eefsec-201ENSMUST00000165242 2679 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Chmp2bQ8BJF9 Rapgef3-207ENSMUST00000134885 1422 ntTSL 5 BASIC17.49■□□□□ 0.39
Chmp2bQ8BJF9 Tnfsf13-201ENSMUST00000018896 1407 ntAPPRIS P2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Chmp2bQ8BJF9 Prcd-201ENSMUST00000106381 724 ntTSL 3 BASIC17.49■□□□□ 0.39
Chmp2bQ8BJF9 Arl4aos-201ENSMUST00000135883 748 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Chmp2bQ8BJF9 Alkbh1-212ENSMUST00000185301 408 ntBASIC17.49■□□□□ 0.39
Chmp2bQ8BJF9 Tspan2-203ENSMUST00000196611 682 ntTSL 5 BASIC17.49■□□□□ 0.39
Chmp2bQ8BJF9 AC175538.2-202ENSMUST00000224997 1057 ntAPPRIS P1 BASIC17.49■□□□□ 0.39
Chmp2bQ8BJF9 Bex2-201ENSMUST00000049130 903 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Chmp2bQ8BJF9 2810425M01Rik-201ENSMUST00000180790 1850 ntTSL 5 BASIC17.49■□□□□ 0.39
Chmp2bQ8BJF9 Atf6b-202ENSMUST00000173984 2315 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
Chmp2bQ8BJF9 Fam120c-201ENSMUST00000073364 5463 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Chmp2bQ8BJF9 Lrrtm1-202ENSMUST00000159616 2541 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Chmp2bQ8BJF9 Lrrc7-201ENSMUST00000106044 5918 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
Chmp2bQ8BJF9 Tlk1-201ENSMUST00000038584 4280 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Chmp2bQ8BJF9 Add1-204ENSMUST00000114338 4007 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Chmp2bQ8BJF9 Baz1a-205ENSMUST00000173433 5788 ntAPPRIS P2 TSL 5 BASIC17.49■□□□□ 0.39
Chmp2bQ8BJF9 Rab11fip5-202ENSMUST00000204087 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Chmp2bQ8BJF9 Rwdd2b-201ENSMUST00000039101 2009 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Chmp2bQ8BJF9 Ptges2-201ENSMUST00000028162 4978 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Chmp2bQ8BJF9 Zmynd19-201ENSMUST00000028350 3903 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Chmp2bQ8BJF9 Rnf128-201ENSMUST00000113026 2750 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Chmp2bQ8BJF9 Ppp1r36-201ENSMUST00000063977 1515 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
Chmp2bQ8BJF9 Negr1-203ENSMUST00000106065 1953 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Chmp2bQ8BJF9 Kctd9-205ENSMUST00000152243 2528 ntTSL 2 BASIC17.48■□□□□ 0.39
Chmp2bQ8BJF9 Clip2-202ENSMUST00000100647 4994 ntAPPRIS P4 TSL 1 (best) BASIC17.48■□□□□ 0.39
Chmp2bQ8BJF9 Gm12896-201ENSMUST00000118430 226 ntBASIC17.48■□□□□ 0.39
Chmp2bQ8BJF9 Sept10-203ENSMUST00000220156 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Chmp2bQ8BJF9 Dpf1-202ENSMUST00000065181 1574 ntAPPRIS ALT1 TSL 5 BASIC17.48■□□□□ 0.39
Chmp2bQ8BJF9 Cdk17-201ENSMUST00000069965 3615 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Chmp2bQ8BJF9 Polr3e-203ENSMUST00000207481 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Chmp2bQ8BJF9 Ctsf-201ENSMUST00000119694 1975 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Chmp2bQ8BJF9 Zbtb45-201ENSMUST00000051390 2171 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Chmp2bQ8BJF9 Tubb4b-ps1-201ENSMUST00000179460 1336 ntBASIC17.47■□□□□ 0.39
Chmp2bQ8BJF9 Snx27-202ENSMUST00000107283 3531 ntAPPRIS P4 TSL 1 (best) BASIC17.47■□□□□ 0.39
Chmp2bQ8BJF9 Spdef-205ENSMUST00000167489 1708 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
Retrieved 100 of 76,532 protein–RNA pairs in 29.6 ms