Protein–RNA interactions for Protein: Q80X41

Vrk1, Serine/threonine-protein kinase VRK1, mousemouse

Predictions only

Length 440 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vrk1Q80X41 Hmg20b-213ENSMUST00000167481 1321 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
Vrk1Q80X41 Gm20460-201ENSMUST00000168709 1572 ntTSL 5 BASIC16.32■□□□□ 0.2
Vrk1Q80X41 Gpha2-201ENSMUST00000025698 609 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Vrk1Q80X41 Snrpd2-201ENSMUST00000049294 1420 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Vrk1Q80X41 1600012H06Rik-201ENSMUST00000052691 2506 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Vrk1Q80X41 Snx21-201ENSMUST00000056181 2590 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Vrk1Q80X41 4933427E11Rik-201ENSMUST00000056711 1214 ntBASIC16.32■□□□□ 0.2
Vrk1Q80X41 Tbx2-201ENSMUST00000000095 3626 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Vrk1Q80X41 Plpbp-202ENSMUST00000098851 1368 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Vrk1Q80X41 Cpeb2-204ENSMUST00000166713 6846 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
Vrk1Q80X41 Sbf1-201ENSMUST00000123791 6190 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
Vrk1Q80X41 Ahcyl2-202ENSMUST00000102995 5155 ntAPPRIS ALT1 TSL 5 BASIC16.32■□□□□ 0.2
Vrk1Q80X41 Adpgk-205ENSMUST00000217570 2484 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Vrk1Q80X41 Naa60-212ENSMUST00000186375 2424 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Vrk1Q80X41 A730060N03Rik-201ENSMUST00000174277 2124 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Vrk1Q80X41 U2af2-209ENSMUST00000209099 2088 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
Vrk1Q80X41 Baiap2-204ENSMUST00000106231 4005 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Vrk1Q80X41 Tia1-203ENSMUST00000095754 1789 ntAPPRIS ALT1 TSL 5 BASIC16.31■□□□□ 0.2
Vrk1Q80X41 Gm26885-201ENSMUST00000181920 1688 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Vrk1Q80X41 Atp2c1-204ENSMUST00000112558 5642 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
Vrk1Q80X41 Ciz1-201ENSMUST00000048964 2771 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
Vrk1Q80X41 Blvrb-204ENSMUST00000133750 509 ntTSL 2 BASIC16.31■□□□□ 0.2
Vrk1Q80X41 Gm15545-203ENSMUST00000150613 1059 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Vrk1Q80X41 Utp23-204ENSMUST00000161651 582 ntTSL 5 BASIC16.31■□□□□ 0.2
Vrk1Q80X41 Rpl14-201ENSMUST00000165532 1009 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Vrk1Q80X41 Gm3272-201ENSMUST00000181181 1229 ntBASIC16.31■□□□□ 0.2
Vrk1Q80X41 Gm8797-201ENSMUST00000192045 490 ntAPPRIS P1 BASIC16.31■□□□□ 0.2
Vrk1Q80X41 Gm10566-201ENSMUST00000086739 996 ntBASIC16.31■□□□□ 0.2
Vrk1Q80X41 Vegfc-201ENSMUST00000033919 2449 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Vrk1Q80X41 Efnb2-201ENSMUST00000001319 4793 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Vrk1Q80X41 Agfg1-206ENSMUST00000189220 8044 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Vrk1Q80X41 Lhx6-205ENSMUST00000112967 3378 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Vrk1Q80X41 Lrrc47-201ENSMUST00000030894 3395 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Vrk1Q80X41 Kcns2-201ENSMUST00000072868 5456 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Vrk1Q80X41 Rnaseh2a-202ENSMUST00000109736 2981 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
Vrk1Q80X41 Gm11373-201ENSMUST00000129791 2819 ntTSL 5 BASIC16.31■□□□□ 0.2
Vrk1Q80X41 Idnk-204ENSMUST00000226010 1898 ntBASIC16.31■□□□□ 0.2
Vrk1Q80X41 Exoc3l2-202ENSMUST00000137613 4016 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
Vrk1Q80X41 Trpc4ap-202ENSMUST00000103140 3091 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
Vrk1Q80X41 Plekhf2-201ENSMUST00000054776 2977 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Vrk1Q80X41 Plekha4-206ENSMUST00000211155 2044 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
Vrk1Q80X41 Rtkn-203ENSMUST00000121093 2597 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
Vrk1Q80X41 Runx1t1-201ENSMUST00000006761 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Vrk1Q80X41 Echdc2-203ENSMUST00000116307 893 ntTSL 5 BASIC16.3■□□□□ 0.2
Vrk1Q80X41 Cyp4f41-ps-201ENSMUST00000126790 1077 ntBASIC16.3■□□□□ 0.2
Vrk1Q80X41 Gm17807-201ENSMUST00000186869 298 ntBASIC16.3■□□□□ 0.2
Vrk1Q80X41 Gm17971-201ENSMUST00000190239 806 ntBASIC16.3■□□□□ 0.2
Vrk1Q80X41 Fuz-206ENSMUST00000207485 1140 ntAPPRIS ALT1 TSL 5 BASIC16.3■□□□□ 0.2
Vrk1Q80X41 4933406B15Rik-201ENSMUST00000220065 1182 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Vrk1Q80X41 Nme3-201ENSMUST00000024978 715 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Vrk1Q80X41 Iscu-201ENSMUST00000026937 957 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Vrk1Q80X41 Gm27029-202ENSMUST00000107259 1855 ntAPPRIS P5 TSL 5 BASIC16.3■□□□□ 0.2
Vrk1Q80X41 Pcdhac2-201ENSMUST00000047479 5888 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Vrk1Q80X41 Gm37711-201ENSMUST00000194907 1749 ntTSL 5 BASIC16.3■□□□□ 0.2
Vrk1Q80X41 Gpr137-201ENSMUST00000025909 1717 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Vrk1Q80X41 Tmem175-204ENSMUST00000146207 1686 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Vrk1Q80X41 Ptpra-201ENSMUST00000028769 3227 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Vrk1Q80X41 Ints8-202ENSMUST00000108318 3169 ntTSL 5 BASIC16.3■□□□□ 0.2
Vrk1Q80X41 Map1lc3b-204ENSMUST00000181826 2633 ntBASIC16.3■□□□□ 0.2
Vrk1Q80X41 Trmo-201ENSMUST00000030015 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Vrk1Q80X41 Gm26795-201ENSMUST00000180993 1952 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Vrk1Q80X41 Rbpj-203ENSMUST00000113865 5440 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Vrk1Q80X41 Aida-206ENSMUST00000193625 1810 ntTSL 3 BASIC16.29■□□□□ 0.2
Vrk1Q80X41 Tubb4b-ps1-201ENSMUST00000179460 1336 ntBASIC16.29■□□□□ 0.2
Vrk1Q80X41 Prps1l3-201ENSMUST00000139049 1720 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Vrk1Q80X41 Wipf1-201ENSMUST00000094681 4728 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Vrk1Q80X41 Adgrv1-207ENSMUST00000128585 2580 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Vrk1Q80X41 Atp5g1-202ENSMUST00000107684 596 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Vrk1Q80X41 Pgam1-ps2-201ENSMUST00000117129 765 ntBASIC16.29■□□□□ 0.2
Vrk1Q80X41 4930401G09Rik-201ENSMUST00000139500 637 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Vrk1Q80X41 Lamtor5-201ENSMUST00000145735 881 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Vrk1Q80X41 Stard3nl-208ENSMUST00000200323 1128 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Vrk1Q80X41 AC130713.1-201ENSMUST00000228853 1096 ntBASIC16.29■□□□□ 0.2
Vrk1Q80X41 Pdrg1-201ENSMUST00000028972 1273 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Vrk1Q80X41 Sox6os-201ENSMUST00000032900 420 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Vrk1Q80X41 Pafah1b3-201ENSMUST00000005583 901 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Vrk1Q80X41 Ebf3-204ENSMUST00000169486 4994 ntAPPRIS ALT1 TSL 5 BASIC16.29■□□□□ 0.2
Vrk1Q80X41 4933427J07Rik-201ENSMUST00000156275 1533 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Vrk1Q80X41 Csnk2a2-203ENSMUST00000212214 6779 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Vrk1Q80X41 Hnrnph3-201ENSMUST00000020263 2213 ntAPPRIS P3 TSL 5 BASIC16.29■□□□□ 0.2
Vrk1Q80X41 Frmd3-202ENSMUST00000098006 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Vrk1Q80X41 Fam222a-201ENSMUST00000043650 2930 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Vrk1Q80X41 Inpp4a-201ENSMUST00000027287 5691 ntAPPRIS P2 TSL 5 BASIC16.28■□□□□ 0.2
Vrk1Q80X41 Rybp-201ENSMUST00000101118 4503 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Vrk1Q80X41 Agfg1-205ENSMUST00000187899 2078 ntTSL 5 BASIC16.28■□□□□ 0.2
Vrk1Q80X41 Klhl25-202ENSMUST00000171155 3403 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Vrk1Q80X41 Vangl2-203ENSMUST00000111264 2349 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Vrk1Q80X41 Sh3yl1-202ENSMUST00000110880 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Vrk1Q80X41 Nr1h2-202ENSMUST00000107910 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Vrk1Q80X41 Yif1b-203ENSMUST00000108238 1126 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Vrk1Q80X41 Gm11950-201ENSMUST00000121615 838 ntBASIC16.28■□□□□ 0.2
Vrk1Q80X41 Mras-203ENSMUST00000122384 1122 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Vrk1Q80X41 Mrps12-204ENSMUST00000171183 883 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
Vrk1Q80X41 Snhg10-202ENSMUST00000222812 527 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Vrk1Q80X41 Cldn22-201ENSMUST00000038693 995 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
Vrk1Q80X41 Tbc1d2b-202ENSMUST00000128874 3473 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Vrk1Q80X41 Gpr84-201ENSMUST00000079824 1550 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Vrk1Q80X41 Rnf157-202ENSMUST00000106398 4553 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
Vrk1Q80X41 Rsu1-201ENSMUST00000028059 1546 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Vrk1Q80X41 Smu1-201ENSMUST00000030117 2418 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Retrieved 100 of 76,532 protein–RNA pairs in 35.4 ms