Protein–RNA interactions for Protein: Q6PGB8

Smarca1, Probable global transcription activator SNF2L1, mousemouse

Predictions only

Length 1,046 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarca1Q6PGB8 D330023K18Rik-201ENSMUST00000133550 920 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Smarca1Q6PGB8 4833413E03Rik-201ENSMUST00000013706 1091 ntTSL 5 BASIC19.03■□□□□ 0.64
Smarca1Q6PGB8 Ddah2-204ENSMUST00000174493 1254 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Smarca1Q6PGB8 Klf13-202ENSMUST00000183817 599 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Smarca1Q6PGB8 Gm26709-202ENSMUST00000223049 819 ntTSL 5 BASIC19.03■□□□□ 0.64
Smarca1Q6PGB8 Krt88-201ENSMUST00000023781 903 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Smarca1Q6PGB8 Fam57b-201ENSMUST00000079423 2328 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Smarca1Q6PGB8 Lrriq4-203ENSMUST00000172350 1797 ntAPPRIS P3 TSL 5 BASIC19.03■□□□□ 0.64
Smarca1Q6PGB8 Mmd-201ENSMUST00000004050 2677 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Smarca1Q6PGB8 Yipf2-204ENSMUST00000213809 1883 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Smarca1Q6PGB8 Erlin1-201ENSMUST00000071698 3228 ntAPPRIS P1 TSL 5 BASIC19.02■□□□□ 0.64
Smarca1Q6PGB8 Lzts2-201ENSMUST00000039016 2825 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Smarca1Q6PGB8 0610012G03Rik-201ENSMUST00000202722 1445 ntAPPRIS P1 BASIC19.02■□□□□ 0.64
Smarca1Q6PGB8 Nfe2l1-202ENSMUST00000107657 3869 ntAPPRIS P3 TSL 5 BASIC19.02■□□□□ 0.64
Smarca1Q6PGB8 Msmo1-201ENSMUST00000034015 2044 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Smarca1Q6PGB8 Asap2-202ENSMUST00000064595 5678 ntAPPRIS P4 TSL 5 BASIC19.02■□□□□ 0.64
Smarca1Q6PGB8 Gm17182-201ENSMUST00000163795 860 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
Smarca1Q6PGB8 AC124601.2-201ENSMUST00000222888 759 ntTSL 2 BASIC19.02■□□□□ 0.64
Smarca1Q6PGB8 Rprml-201ENSMUST00000057870 1010 ntAPPRIS P1 BASIC19.02■□□□□ 0.64
Smarca1Q6PGB8 Vps37d-202ENSMUST00000076203 1286 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
Smarca1Q6PGB8 Lrch4-201ENSMUST00000031734 3078 ntAPPRIS P3 TSL 1 (best) BASIC19.02■□□□□ 0.64
Smarca1Q6PGB8 Nr1h2-201ENSMUST00000073488 1999 ntAPPRIS P3 TSL 1 (best) BASIC19.02■□□□□ 0.64
Smarca1Q6PGB8 Cd47-201ENSMUST00000084838 5277 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
Smarca1Q6PGB8 2810408A11Rik-201ENSMUST00000018714 1485 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.63
Smarca1Q6PGB8 Trappc3-201ENSMUST00000030660 1336 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Smarca1Q6PGB8 E030042O20Rik-201ENSMUST00000135244 1427 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Smarca1Q6PGB8 Asph-204ENSMUST00000084915 2884 ntTSL 5 BASIC19.01■□□□□ 0.63
Smarca1Q6PGB8 Cpox-201ENSMUST00000060077 3186 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Smarca1Q6PGB8 Cwh43-201ENSMUST00000031040 2716 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Smarca1Q6PGB8 Anapc13-203ENSMUST00000188398 727 ntAPPRIS P1 TSL 2 BASIC19.01■□□□□ 0.63
Smarca1Q6PGB8 Rps2-ps2-201ENSMUST00000194305 881 ntBASIC19.01■□□□□ 0.63
Smarca1Q6PGB8 Xpa-201ENSMUST00000030013 955 ntAPPRIS P2 TSL 1 (best) BASIC19.01■□□□□ 0.63
Smarca1Q6PGB8 Gm11273-201ENSMUST00000044043 390 ntAPPRIS P1 BASIC19.01■□□□□ 0.63
Smarca1Q6PGB8 Crebzf-201ENSMUST00000061767 3376 ntAPPRIS P1 BASIC19.01■□□□□ 0.63
Smarca1Q6PGB8 Soga1-201ENSMUST00000069098 7864 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Smarca1Q6PGB8 Naf1-201ENSMUST00000118009 2990 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Smarca1Q6PGB8 Pick1-206ENSMUST00000166155 1699 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Smarca1Q6PGB8 Gm19721-201ENSMUST00000195284 1764 ntBASIC19.01■□□□□ 0.63
Smarca1Q6PGB8 Krt81-201ENSMUST00000061185 1857 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Smarca1Q6PGB8 Tasp1-201ENSMUST00000046656 2480 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Smarca1Q6PGB8 Cadm3-201ENSMUST00000005470 2518 ntTSL 5 BASIC19■□□□□ 0.63
Smarca1Q6PGB8 Zbtb22-201ENSMUST00000053429 2611 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Smarca1Q6PGB8 Echdc2-204ENSMUST00000116309 1238 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Smarca1Q6PGB8 Gm10231-201ENSMUST00000181584 441 ntBASIC19■□□□□ 0.63
Smarca1Q6PGB8 Atp5g2-202ENSMUST00000185641 731 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Smarca1Q6PGB8 Gm10175-202ENSMUST00000208752 441 ntBASIC19■□□□□ 0.63
Smarca1Q6PGB8 Pfdn4-201ENSMUST00000063682 935 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Smarca1Q6PGB8 Atp5g2-201ENSMUST00000075630 441 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Smarca1Q6PGB8 Ppan-201ENSMUST00000004203 1670 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Smarca1Q6PGB8 Gm16401-202ENSMUST00000197463 2074 ntBASIC19■□□□□ 0.63
Smarca1Q6PGB8 Nfs1-201ENSMUST00000029147 2051 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Smarca1Q6PGB8 Tmem163-203ENSMUST00000160616 2657 ntAPPRIS P1 TSL 2 BASIC19■□□□□ 0.63
Smarca1Q6PGB8 Cdc14b-203ENSMUST00000109770 3052 ntAPPRIS P3 TSL 1 (best) BASIC19■□□□□ 0.63
Smarca1Q6PGB8 Stambpl1-201ENSMUST00000054956 2024 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Smarca1Q6PGB8 Gprc5c-203ENSMUST00000122967 1709 ntTSL 5 BASIC19■□□□□ 0.63
Smarca1Q6PGB8 Sec61a1-201ENSMUST00000032168 3172 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Smarca1Q6PGB8 Dhx32-201ENSMUST00000033290 2955 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Smarca1Q6PGB8 Baiap2-204ENSMUST00000106231 4005 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
Smarca1Q6PGB8 Amfr-201ENSMUST00000053766 3880 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Smarca1Q6PGB8 Lhx6-203ENSMUST00000112963 3481 ntTSL 2 BASIC18.99■□□□□ 0.63
Smarca1Q6PGB8 Abhd11-206ENSMUST00000154469 1473 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Smarca1Q6PGB8 Cxcl14-202ENSMUST00000224801 1467 ntBASIC18.99■□□□□ 0.63
Smarca1Q6PGB8 Gm24841-201ENSMUST00000158676 357 ntBASIC18.99■□□□□ 0.63
Smarca1Q6PGB8 Tpsg1-202ENSMUST00000160377 1040 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Smarca1Q6PGB8 Gm32151-201ENSMUST00000223521 915 ntTSL 5 BASIC18.99■□□□□ 0.63
Smarca1Q6PGB8 Mrpl21-201ENSMUST00000025743 802 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
Smarca1Q6PGB8 Gm45774-201ENSMUST00000211992 2665 ntBASIC18.99■□□□□ 0.63
Smarca1Q6PGB8 Zranb2-203ENSMUST00000106058 2924 ntAPPRIS P2 TSL 1 (best) BASIC18.99■□□□□ 0.63
Smarca1Q6PGB8 Agbl4-205ENSMUST00000106591 1406 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
Smarca1Q6PGB8 Col4a3bp-202ENSMUST00000109444 5285 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Smarca1Q6PGB8 Sco1-201ENSMUST00000092996 2412 ntAPPRIS P2 TSL 1 (best) BASIC18.99■□□□□ 0.63
Smarca1Q6PGB8 Tead3-205ENSMUST00000154873 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
Smarca1Q6PGB8 Cacul1-201ENSMUST00000081790 5790 ntAPPRIS P3 TSL 1 (best) BASIC18.98■□□□□ 0.63
Smarca1Q6PGB8 Dcun1d1-201ENSMUST00000108182 4980 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Smarca1Q6PGB8 Atp2a2-201ENSMUST00000031423 4486 ntAPPRIS P4 TSL 1 (best) BASIC18.98■□□□□ 0.63
Smarca1Q6PGB8 Gm16105-201ENSMUST00000156926 697 ntTSL 3 BASIC18.98■□□□□ 0.63
Smarca1Q6PGB8 1700025A08Rik-201ENSMUST00000200753 609 ntBASIC18.98■□□□□ 0.63
Smarca1Q6PGB8 Mpc2-201ENSMUST00000027853 1025 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Smarca1Q6PGB8 Mrpl9-201ENSMUST00000029786 1612 ntAPPRIS P2 TSL 1 (best) BASIC18.98■□□□□ 0.63
Smarca1Q6PGB8 Negr1-203ENSMUST00000106065 1953 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Smarca1Q6PGB8 Slc39a10-201ENSMUST00000027131 5498 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Smarca1Q6PGB8 Nsun5-201ENSMUST00000000940 2243 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Smarca1Q6PGB8 Tnfsf14-201ENSMUST00000005976 1859 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Smarca1Q6PGB8 Map3k10-202ENSMUST00000108341 3403 ntAPPRIS ALT2 TSL 5 BASIC18.98■□□□□ 0.63
Smarca1Q6PGB8 Trim24-201ENSMUST00000031859 4042 ntAPPRIS P3 TSL 1 (best) BASIC18.98■□□□□ 0.63
Smarca1Q6PGB8 Scrib-203ENSMUST00000109946 5545 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
Smarca1Q6PGB8 Ube2d3-202ENSMUST00000166033 2504 ntAPPRIS P2 TSL 1 (best) BASIC18.98■□□□□ 0.63
Smarca1Q6PGB8 Zdhhc6-207ENSMUST00000224897 2168 ntAPPRIS P1 BASIC18.98■□□□□ 0.63
Smarca1Q6PGB8 Lrp3-201ENSMUST00000118444 3877 ntAPPRIS P1 TSL 5 BASIC18.98■□□□□ 0.63
Smarca1Q6PGB8 Necab3-202ENSMUST00000109716 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
Smarca1Q6PGB8 Cnksr1-201ENSMUST00000030645 2468 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Smarca1Q6PGB8 Gaa-202ENSMUST00000106258 1369 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Smarca1Q6PGB8 Sh3yl1-202ENSMUST00000110880 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
Smarca1Q6PGB8 Thegl-202ENSMUST00000117880 1641 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Smarca1Q6PGB8 2810425M01Rik-201ENSMUST00000180790 1850 ntTSL 5 BASIC18.97■□□□□ 0.63
Smarca1Q6PGB8 Il17re-208ENSMUST00000204774 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
Smarca1Q6PGB8 Cct8-201ENSMUST00000026704 2394 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Smarca1Q6PGB8 Ctsh-201ENSMUST00000034915 1617 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Smarca1Q6PGB8 Ldb1-205ENSMUST00000137771 2014 ntTSL 5 BASIC18.97■□□□□ 0.63
Smarca1Q6PGB8 Tia1-203ENSMUST00000095754 1789 ntAPPRIS ALT1 TSL 5 BASIC18.97■□□□□ 0.63
Retrieved 100 of 76,532 protein–RNA pairs in 24.3 ms