Protein–RNA interactions for Protein: Q6PCM1

Kdm3a, Lysine-specific demethylase 3A, mousemouse

Predictions only

Length 1,323 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Kdm3aQ6PCM1 Zfp768-201ENSMUST00000060783 2356 ntAPPRIS P2 TSL 1 (best) BASIC20.63■□□□□ 0.89
Kdm3aQ6PCM1 Atad2b-201ENSMUST00000045664 8035 ntAPPRIS P1 TSL 5 BASIC20.63■□□□□ 0.89
Kdm3aQ6PCM1 2310002F09Rik-201ENSMUST00000181454 1607 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Kdm3aQ6PCM1 Icmt-201ENSMUST00000048892 4919 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Kdm3aQ6PCM1 Cldn4-201ENSMUST00000051401 1816 ntAPPRIS P1 BASIC20.63■□□□□ 0.89
Kdm3aQ6PCM1 Wnk2-205ENSMUST00000110097 6882 ntAPPRIS ALT2 TSL 5 BASIC20.62■□□□□ 0.89
Kdm3aQ6PCM1 Wnk2-203ENSMUST00000091623 6897 ntAPPRIS P4 TSL 5 BASIC20.62■□□□□ 0.89
Kdm3aQ6PCM1 Mmp28-201ENSMUST00000021020 2311 ntAPPRIS P4 TSL 1 (best) BASIC20.62■□□□□ 0.89
Kdm3aQ6PCM1 Fam57b-201ENSMUST00000079423 2328 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Kdm3aQ6PCM1 Atad3a-201ENSMUST00000030903 2413 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Kdm3aQ6PCM1 Hnrnph3-203ENSMUST00000119814 682 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Kdm3aQ6PCM1 Gfod2-203ENSMUST00000155038 951 ntTSL 2 BASIC20.62■□□□□ 0.89
Kdm3aQ6PCM1 Stx3-208ENSMUST00000211641 1018 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Kdm3aQ6PCM1 Pfdn6-201ENSMUST00000025163 807 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Kdm3aQ6PCM1 Pdcd2-201ENSMUST00000054450 1120 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Kdm3aQ6PCM1 Gzme-201ENSMUST00000089549 916 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Kdm3aQ6PCM1 Il9r-204ENSMUST00000142396 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
Kdm3aQ6PCM1 Trim71-201ENSMUST00000111816 9332 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Kdm3aQ6PCM1 Prob1-203ENSMUST00000190196 4888 ntAPPRIS P1 BASIC20.62■□□□□ 0.89
Kdm3aQ6PCM1 Tnfrsf25-202ENSMUST00000035275 1603 ntAPPRIS P3 TSL 1 (best) BASIC20.62■□□□□ 0.89
Kdm3aQ6PCM1 Med18-201ENSMUST00000102567 1675 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Kdm3aQ6PCM1 Hdhd2-202ENSMUST00000097521 1716 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Kdm3aQ6PCM1 Matn4-204ENSMUST00000109359 2179 ntTSL 5 BASIC20.62■□□□□ 0.89
Kdm3aQ6PCM1 Ppp1r13b-201ENSMUST00000054815 4389 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Kdm3aQ6PCM1 Smarca4-202ENSMUST00000098948 6376 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
Kdm3aQ6PCM1 Npb-202ENSMUST00000106194 530 ntAPPRIS ALT2 TSL 2 BASIC20.61■□□□□ 0.89
Kdm3aQ6PCM1 Npb-203ENSMUST00000106195 542 ntAPPRIS P3 TSL 1 (best) BASIC20.61■□□□□ 0.89
Kdm3aQ6PCM1 Fbxo17-203ENSMUST00000108279 1563 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Kdm3aQ6PCM1 Fndc11-202ENSMUST00000108835 1154 ntAPPRIS P1 TSL 2 BASIC20.61■□□□□ 0.89
Kdm3aQ6PCM1 Rnf208-202ENSMUST00000114355 1333 ntAPPRIS P1 BASIC20.61■□□□□ 0.89
Kdm3aQ6PCM1 Gas5-203ENSMUST00000159119 665 ntTSL 5 BASIC20.61■□□□□ 0.89
Kdm3aQ6PCM1 Auh-201ENSMUST00000021913 1320 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Kdm3aQ6PCM1 AC122351.1-201ENSMUST00000220467 126 ntBASIC20.61■□□□□ 0.89
Kdm3aQ6PCM1 Snrnp35-201ENSMUST00000031349 1115 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Kdm3aQ6PCM1 Thumpd3-201ENSMUST00000032398 2163 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Kdm3aQ6PCM1 Cyb561d2-201ENSMUST00000041459 1786 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Kdm3aQ6PCM1 Thrsp-201ENSMUST00000043077 1277 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Kdm3aQ6PCM1 4930465K10Rik-201ENSMUST00000056675 1238 ntBASIC20.61■□□□□ 0.89
Kdm3aQ6PCM1 Trim68-201ENSMUST00000082175 2388 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Kdm3aQ6PCM1 Kcns3-201ENSMUST00000055673 2933 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Kdm3aQ6PCM1 Zfp697-202ENSMUST00000178372 4703 ntAPPRIS P1 TSL 5 BASIC20.61■□□□□ 0.89
Kdm3aQ6PCM1 Cep57-208ENSMUST00000147115 2262 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
Kdm3aQ6PCM1 Dlgap2-203ENSMUST00000133298 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
Kdm3aQ6PCM1 Apba3-201ENSMUST00000057798 2106 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Kdm3aQ6PCM1 Tdh-201ENSMUST00000022522 1881 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Kdm3aQ6PCM1 Acads-201ENSMUST00000031524 1870 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Kdm3aQ6PCM1 Bfsp2-201ENSMUST00000124310 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Kdm3aQ6PCM1 Ccdc166-202ENSMUST00000183130 1563 ntAPPRIS P1 TSL 2 BASIC20.6■□□□□ 0.89
Kdm3aQ6PCM1 Hmg20b-204ENSMUST00000122993 1502 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Kdm3aQ6PCM1 Syncrip-205ENSMUST00000173801 2944 ntAPPRIS ALT1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Kdm3aQ6PCM1 Gm6190-201ENSMUST00000220683 1374 ntBASIC20.6■□□□□ 0.89
Kdm3aQ6PCM1 Gm13186-201ENSMUST00000118031 316 ntBASIC20.6■□□□□ 0.89
Kdm3aQ6PCM1 Rapgef3os1-201ENSMUST00000149373 483 ntTSL 3 BASIC20.6■□□□□ 0.89
Kdm3aQ6PCM1 Mrpl36-203ENSMUST00000222030 680 ntAPPRIS P1 TSL 3 BASIC20.6■□□□□ 0.89
Kdm3aQ6PCM1 AC130671.1-201ENSMUST00000227384 1237 ntBASIC20.6■□□□□ 0.89
Kdm3aQ6PCM1 Mrpl14-201ENSMUST00000024734 645 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Kdm3aQ6PCM1 Med29-201ENSMUST00000003536 1281 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Kdm3aQ6PCM1 Ptcra-201ENSMUST00000041012 1283 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Kdm3aQ6PCM1 Nudt1-201ENSMUST00000050205 954 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Kdm3aQ6PCM1 Nudt1-202ENSMUST00000071881 952 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Kdm3aQ6PCM1 Tmem185a-201ENSMUST00000101506 2429 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Kdm3aQ6PCM1 Arid3b-202ENSMUST00000098686 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
Kdm3aQ6PCM1 Ttyh3-202ENSMUST00000197452 4576 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Kdm3aQ6PCM1 Ddx19a-201ENSMUST00000040416 2547 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Kdm3aQ6PCM1 Rdx-202ENSMUST00000061352 1502 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Kdm3aQ6PCM1 Dhx15-201ENSMUST00000031061 3010 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Kdm3aQ6PCM1 St3gal3-203ENSMUST00000106410 2225 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Kdm3aQ6PCM1 Vps53-203ENSMUST00000108419 2209 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Kdm3aQ6PCM1 Dcaf8-206ENSMUST00000192704 2859 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Kdm3aQ6PCM1 Gls-204ENSMUST00000114513 4966 ntAPPRIS P3 TSL 5 BASIC20.59■□□□□ 0.89
Kdm3aQ6PCM1 Spg21-202ENSMUST00000213957 1302 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Kdm3aQ6PCM1 Nsg1-201ENSMUST00000031009 2581 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Kdm3aQ6PCM1 Htr5b-201ENSMUST00000055884 1935 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Kdm3aQ6PCM1 Taco1os-201ENSMUST00000140736 644 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Kdm3aQ6PCM1 Utp23-204ENSMUST00000161651 582 ntTSL 5 BASIC20.59■□□□□ 0.89
Kdm3aQ6PCM1 A730015C16Rik-201ENSMUST00000164855 1221 ntAPPRIS P1 BASIC20.59■□□□□ 0.89
Kdm3aQ6PCM1 Gm33142-201ENSMUST00000193913 867 ntBASIC20.59■□□□□ 0.89
Kdm3aQ6PCM1 Qdpr-208ENSMUST00000197946 1206 ntTSL 5 BASIC20.59■□□□□ 0.89
Kdm3aQ6PCM1 Hint1-201ENSMUST00000020504 636 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Kdm3aQ6PCM1 AC156832.2-201ENSMUST00000216217 1295 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Kdm3aQ6PCM1 Inmt-201ENSMUST00000003569 1077 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Kdm3aQ6PCM1 Rplp2-201ENSMUST00000084434 964 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Kdm3aQ6PCM1 Lce1i-201ENSMUST00000090866 731 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Kdm3aQ6PCM1 L3hypdh-201ENSMUST00000019862 1831 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Kdm3aQ6PCM1 Irak2-203ENSMUST00000089023 1734 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Kdm3aQ6PCM1 Tenm3-204ENSMUST00000110346 2267 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Kdm3aQ6PCM1 Pdss2-201ENSMUST00000095725 2127 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Kdm3aQ6PCM1 Slbp-203ENSMUST00000101354 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
Kdm3aQ6PCM1 Bmt2-201ENSMUST00000045235 4143 ntAPPRIS P2 TSL 1 (best) BASIC20.59■□□□□ 0.89
Kdm3aQ6PCM1 Psmd8-203ENSMUST00000186182 1512 ntAPPRIS P2 TSL 1 (best) BASIC20.59■□□□□ 0.89
Kdm3aQ6PCM1 Btbd2-201ENSMUST00000003434 3026 ntAPPRIS P2 TSL 5 BASIC20.59■□□□□ 0.89
Kdm3aQ6PCM1 Il1rn-201ENSMUST00000114482 1986 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Kdm3aQ6PCM1 Hoxa10-201ENSMUST00000121043 1436 ntAPPRIS P1 TSL 2 BASIC20.59■□□□□ 0.89
Kdm3aQ6PCM1 Gm8258-201ENSMUST00000055593 1449 ntBASIC20.59■□□□□ 0.89
Kdm3aQ6PCM1 Htr6-202ENSMUST00000105802 2341 ntAPPRIS P1 TSL 5 BASIC20.59■□□□□ 0.89
Kdm3aQ6PCM1 Gm37722-201ENSMUST00000193757 208 ntBASIC20.58■□□□□ 0.89
Kdm3aQ6PCM1 Pagr1a-203ENSMUST00000206416 558 ntTSL 3 BASIC20.58■□□□□ 0.89
Kdm3aQ6PCM1 AC130711.1-201ENSMUST00000224277 906 ntAPPRIS P1 BASIC20.58■□□□□ 0.89
Kdm3aQ6PCM1 Tsr3-201ENSMUST00000063574 1192 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Kdm3aQ6PCM1 Nt5c1a-201ENSMUST00000068262 1220 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Retrieved 100 of 76,532 protein–RNA pairs in 24 ms