Protein–RNA interactions for Protein: Q6P9Z1

Smarcd3, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 3, mousemouse

Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcd3Q6P9Z1 Tmem229a-201ENSMUST00000127247 5157 ntAPPRIS P1 BASIC15.73■□□□□ 0.11
Smarcd3Q6P9Z1 Ttpal-202ENSMUST00000109408 1999 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Smarcd3Q6P9Z1 4930447C04Rik-202ENSMUST00000110489 1988 ntAPPRIS ALT2 TSL 5 BASIC15.73■□□□□ 0.11
Smarcd3Q6P9Z1 F12-201ENSMUST00000021948 1960 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Smarcd3Q6P9Z1 Slc47a1-201ENSMUST00000010267 2639 ntAPPRIS P1 TSL 2 BASIC15.73■□□□□ 0.11
Smarcd3Q6P9Z1 Gm8773-201ENSMUST00000101627 1268 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Smarcd3Q6P9Z1 Nnat-210ENSMUST00000173839 1135 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Smarcd3Q6P9Z1 AC122769.4-201ENSMUST00000228166 901 ntBASIC15.73■□□□□ 0.11
Smarcd3Q6P9Z1 Fcrlb-201ENSMUST00000094337 1284 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Smarcd3Q6P9Z1 Slc35g2-201ENSMUST00000093792 1590 ntAPPRIS P1 TSL 2 BASIC15.73■□□□□ 0.11
Smarcd3Q6P9Z1 Dhx32-201ENSMUST00000033290 2955 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Smarcd3Q6P9Z1 Slc23a4-205ENSMUST00000201355 2003 ntAPPRIS P1 TSL 5 BASIC15.73■□□□□ 0.11
Smarcd3Q6P9Z1 Tasp1-201ENSMUST00000046656 2480 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Smarcd3Q6P9Z1 Marveld1-201ENSMUST00000061111 3066 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Smarcd3Q6P9Z1 Pde5a-204ENSMUST00000200389 7603 ntAPPRIS ALT2 TSL 5 BASIC15.73■□□□□ 0.11
Smarcd3Q6P9Z1 AW011738-201ENSMUST00000105140 1848 ntAPPRIS P1 BASIC15.73■□□□□ 0.11
Smarcd3Q6P9Z1 Klhl29-201ENSMUST00000020958 7041 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Smarcd3Q6P9Z1 Gna12-201ENSMUST00000000153 3416 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Smarcd3Q6P9Z1 Cnot9-201ENSMUST00000087215 3268 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Smarcd3Q6P9Z1 Nsmf-203ENSMUST00000100334 2957 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Smarcd3Q6P9Z1 Mmd-201ENSMUST00000004050 2677 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Smarcd3Q6P9Z1 Nos1ap-207ENSMUST00000161966 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
Smarcd3Q6P9Z1 Sh2b1-203ENSMUST00000205440 3089 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
Smarcd3Q6P9Z1 Tmem233-201ENSMUST00000111997 2477 ntAPPRIS P1 TSL 2 BASIC15.72■□□□□ 0.11
Smarcd3Q6P9Z1 Yipf2-204ENSMUST00000213809 1883 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Smarcd3Q6P9Z1 Hmces-202ENSMUST00000113606 1572 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Smarcd3Q6P9Z1 Guf1-202ENSMUST00000087228 3433 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Smarcd3Q6P9Z1 Gm12933-201ENSMUST00000120203 872 ntBASIC15.72■□□□□ 0.11
Smarcd3Q6P9Z1 1700007L15Rik-201ENSMUST00000180923 737 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Smarcd3Q6P9Z1 Mir6349-201ENSMUST00000184059 97 ntBASIC15.72■□□□□ 0.11
Smarcd3Q6P9Z1 Gm9780-201ENSMUST00000184272 350 ntTSL 2 BASIC15.72■□□□□ 0.11
Smarcd3Q6P9Z1 Gm5408-201ENSMUST00000197998 747 ntBASIC15.72■□□□□ 0.11
Smarcd3Q6P9Z1 Gm44672-201ENSMUST00000206944 1098 ntBASIC15.72■□□□□ 0.11
Smarcd3Q6P9Z1 4933406B15Rik-201ENSMUST00000220065 1182 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Smarcd3Q6P9Z1 Rbks-201ENSMUST00000031018 1042 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Smarcd3Q6P9Z1 Crybb1-201ENSMUST00000031286 882 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Smarcd3Q6P9Z1 Gtf2h2-201ENSMUST00000066940 1065 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Smarcd3Q6P9Z1 BC107364-201ENSMUST00000093126 1159 ntAPPRIS P4 TSL 1 (best) BASIC15.72■□□□□ 0.11
Smarcd3Q6P9Z1 Cldn3-201ENSMUST00000094245 1259 ntAPPRIS P1 BASIC15.72■□□□□ 0.11
Smarcd3Q6P9Z1 BC107364-202ENSMUST00000098841 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
Smarcd3Q6P9Z1 Gm10649-203ENSMUST00000148066 1812 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Smarcd3Q6P9Z1 Slc6a8-204ENSMUST00000114467 2509 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Smarcd3Q6P9Z1 A430078I02Rik-202ENSMUST00000154066 2233 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Smarcd3Q6P9Z1 Jade2-202ENSMUST00000109090 6230 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
Smarcd3Q6P9Z1 Zfx-201ENSMUST00000088102 7002 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Smarcd3Q6P9Z1 Aspscr1-204ENSMUST00000106159 1615 ntTSL 5 BASIC15.72■□□□□ 0.11
Smarcd3Q6P9Z1 Ngb-201ENSMUST00000021420 1616 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
Smarcd3Q6P9Z1 Hmces-201ENSMUST00000032141 1464 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Smarcd3Q6P9Z1 Proc-201ENSMUST00000171765 1566 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.11
Smarcd3Q6P9Z1 Trmo-202ENSMUST00000086563 1554 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.11
Smarcd3Q6P9Z1 Kank1-201ENSMUST00000049400 5637 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.11
Smarcd3Q6P9Z1 Slc25a23-201ENSMUST00000040280 3362 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Smarcd3Q6P9Z1 Trabd-206ENSMUST00000169891 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
Smarcd3Q6P9Z1 Gm11643-201ENSMUST00000119578 864 ntBASIC15.71■□□□□ 0.11
Smarcd3Q6P9Z1 Taz-208ENSMUST00000132437 768 ntTSL 3 BASIC15.71■□□□□ 0.11
Smarcd3Q6P9Z1 Gucd1-211ENSMUST00000219774 806 ntTSL 3 BASIC15.71■□□□□ 0.11
Smarcd3Q6P9Z1 Olfr322-201ENSMUST00000072030 984 ntAPPRIS P1 BASIC15.71■□□□□ 0.11
Smarcd3Q6P9Z1 Fgf2-208ENSMUST00000200585 5973 ntAPPRIS P2 TSL 1 (best) BASIC15.71■□□□□ 0.11
Smarcd3Q6P9Z1 Car2-201ENSMUST00000029078 1788 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Smarcd3Q6P9Z1 Stk39-201ENSMUST00000102715 3536 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Smarcd3Q6P9Z1 Gpn2-201ENSMUST00000030661 1367 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Smarcd3Q6P9Z1 Capzb-202ENSMUST00000042675 1604 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Smarcd3Q6P9Z1 Paqr3-201ENSMUST00000069453 1375 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Smarcd3Q6P9Z1 Ern1-204ENSMUST00000106801 1957 ntTSL 1 (best) BASIC15.71■□□□□ 0.1
Smarcd3Q6P9Z1 Gm26860-201ENSMUST00000181674 1489 ntTSL 5 BASIC15.71■□□□□ 0.1
Smarcd3Q6P9Z1 AI314180-201ENSMUST00000055822 1478 ntTSL 1 (best) BASIC15.71■□□□□ 0.1
Smarcd3Q6P9Z1 Gbe1-201ENSMUST00000023393 2846 ntAPPRIS ALT2 TSL 5 BASIC15.71■□□□□ 0.1
Smarcd3Q6P9Z1 Tgfb2-201ENSMUST00000045288 5116 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Smarcd3Q6P9Z1 Gm21974-201ENSMUST00000126662 2037 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
Smarcd3Q6P9Z1 F2rl3-201ENSMUST00000058099 1751 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Smarcd3Q6P9Z1 Gpr20-201ENSMUST00000064166 2144 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Smarcd3Q6P9Z1 9430097D07Rik-201ENSMUST00000100190 1501 ntAPPRIS P1 BASIC15.7■□□□□ 0.1
Smarcd3Q6P9Z1 Cdipt-201ENSMUST00000032920 1974 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Smarcd3Q6P9Z1 Gm15648-201ENSMUST00000149681 778 ntTSL 5 BASIC15.7■□□□□ 0.1
Smarcd3Q6P9Z1 Snhg6-203ENSMUST00000182580 473 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Smarcd3Q6P9Z1 1700003N22Rik-201ENSMUST00000194834 808 ntBASIC15.7■□□□□ 0.1
Smarcd3Q6P9Z1 Gm19391-201ENSMUST00000196653 999 ntTSL 3 BASIC15.7■□□□□ 0.1
Smarcd3Q6P9Z1 Gm2559-201ENSMUST00000201323 363 ntBASIC15.7■□□□□ 0.1
Smarcd3Q6P9Z1 Gm10138-203ENSMUST00000206952 366 ntBASIC15.7■□□□□ 0.1
Smarcd3Q6P9Z1 E030030I06Rik-201ENSMUST00000069372 876 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Smarcd3Q6P9Z1 Gm4968-201ENSMUST00000071458 858 ntBASIC15.7■□□□□ 0.1
Smarcd3Q6P9Z1 Ubr2-202ENSMUST00000113337 7633 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
Smarcd3Q6P9Z1 Csrp2-201ENSMUST00000020403 1384 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Smarcd3Q6P9Z1 Il6st-208ENSMUST00000184311 2985 ntAPPRIS P2 TSL 5 BASIC15.7■□□□□ 0.1
Smarcd3Q6P9Z1 Arntl-204ENSMUST00000210238 2976 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
Smarcd3Q6P9Z1 Pcdh1-203ENSMUST00000160721 5416 ntTSL 5 BASIC15.7■□□□□ 0.1
Smarcd3Q6P9Z1 Rabep1-201ENSMUST00000076270 5408 ntAPPRIS P2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Smarcd3Q6P9Z1 Gm26548-201ENSMUST00000181165 2029 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Smarcd3Q6P9Z1 Plekhh3-206ENSMUST00000164474 3010 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Smarcd3Q6P9Z1 Bcs1l-202ENSMUST00000113732 1679 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
Smarcd3Q6P9Z1 Sec61a1-201ENSMUST00000032168 3172 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Smarcd3Q6P9Z1 Ltbp1-201ENSMUST00000001927 6671 ntTSL 5 BASIC15.69■□□□□ 0.1
Smarcd3Q6P9Z1 Zmynd15-203ENSMUST00000108563 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Smarcd3Q6P9Z1 Plbd2-201ENSMUST00000031597 4208 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Smarcd3Q6P9Z1 Tlk2-204ENSMUST00000106941 3699 ntAPPRIS ALT1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Smarcd3Q6P9Z1 Gm45774-201ENSMUST00000211992 2665 ntBASIC15.69■□□□□ 0.1
Smarcd3Q6P9Z1 Cdc25a-201ENSMUST00000094324 3632 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Smarcd3Q6P9Z1 Sfrp2-201ENSMUST00000029625 2003 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Smarcd3Q6P9Z1 1700067K01Rik-203ENSMUST00000172548 986 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Smarcd3Q6P9Z1 4930467K11Rik-201ENSMUST00000180831 723 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Retrieved 100 of 76,532 protein–RNA pairs in 36.3 ms