Protein–RNA interactions for Protein: Q61191

Hcfc1, Host cell factor 1, mousemouse

Known RBP Predictions only

Length 2,045 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hcfc1Q61191 Lsmem1-201ENSMUST00000095760 1213 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Hcfc1Q61191 Cbx4-201ENSMUST00000026665 5179 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Hcfc1Q61191 Rilpl1-201ENSMUST00000062153 2249 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Hcfc1Q61191 Epn1-207ENSMUST00000208634 2127 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
Hcfc1Q61191 Myo16-204ENSMUST00000208309 2462 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Hcfc1Q61191 Cacnb3-201ENSMUST00000003442 2819 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Hcfc1Q61191 Smarcc1-201ENSMUST00000088716 5717 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Hcfc1Q61191 Plekhm2-201ENSMUST00000030751 4154 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Hcfc1Q61191 Mex3d-201ENSMUST00000105350 3266 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Hcfc1Q61191 Surf4-201ENSMUST00000015011 3281 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Hcfc1Q61191 D10Jhu81e-201ENSMUST00000001242 1378 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Hcfc1Q61191 Psmb1-201ENSMUST00000014913 1036 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Hcfc1Q61191 Dupd1-201ENSMUST00000073870 1138 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Hcfc1Q61191 Rhog-201ENSMUST00000098230 1269 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Hcfc1Q61191 Nfatc2-205ENSMUST00000137451 2369 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Hcfc1Q61191 Htr5b-201ENSMUST00000055884 1935 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Hcfc1Q61191 Tmem116-203ENSMUST00000094357 1366 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
Hcfc1Q61191 Amn1-201ENSMUST00000095319 1369 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Hcfc1Q61191 Zfp655-206ENSMUST00000200039 1765 ntAPPRIS ALT1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Hcfc1Q61191 Hoxb3os-201ENSMUST00000131275 2315 ntTSL 3 BASIC14.35□□□□□ -0.11
Hcfc1Q61191 Selenoh-201ENSMUST00000102646 783 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Hcfc1Q61191 Gm21586-201ENSMUST00000107988 264 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Hcfc1Q61191 Gm21953-201ENSMUST00000108002 264 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
Hcfc1Q61191 Ndufb6-202ENSMUST00000108108 480 ntTSL 3 BASIC14.35□□□□□ -0.11
Hcfc1Q61191 Gm20878-208ENSMUST00000181518 264 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Hcfc1Q61191 Selenoh-206ENSMUST00000189988 390 ntTSL 3 BASIC14.35□□□□□ -0.11
Hcfc1Q61191 Rgp1-201ENSMUST00000030190 1292 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Hcfc1Q61191 Ank1-201ENSMUST00000033947 1030 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Hcfc1Q61191 Hist1h1a-201ENSMUST00000055770 741 ntAPPRIS P1 BASIC14.35□□□□□ -0.11
Hcfc1Q61191 Grk6-206ENSMUST00000224995 2971 ntBASIC14.35□□□□□ -0.11
Hcfc1Q61191 Pisd-201ENSMUST00000061895 2183 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
Hcfc1Q61191 Arl11-201ENSMUST00000055159 1482 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Hcfc1Q61191 Dyrk2-201ENSMUST00000004281 6129 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Hcfc1Q61191 Zfp623-201ENSMUST00000037260 2463 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Hcfc1Q61191 Ino80e-201ENSMUST00000050833 1944 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Hcfc1Q61191 Snx5-202ENSMUST00000110030 2512 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Hcfc1Q61191 A230065H16Rik-201ENSMUST00000150384 670 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Hcfc1Q61191 Gm1818-201ENSMUST00000169406 1184 ntBASIC14.34□□□□□ -0.11
Hcfc1Q61191 Timm10b-211ENSMUST00000210350 529 ntAPPRIS ALT2 TSL 2 BASIC14.34□□□□□ -0.11
Hcfc1Q61191 Srrd-201ENSMUST00000031289 1110 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Hcfc1Q61191 Hist1h2ak-201ENSMUST00000074752 393 ntAPPRIS P1 BASIC14.34□□□□□ -0.11
Hcfc1Q61191 Suz12-201ENSMUST00000017692 4373 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
Hcfc1Q61191 Gm9917-202ENSMUST00000181099 1499 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Hcfc1Q61191 Chtop-204ENSMUST00000107342 2411 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Hcfc1Q61191 Arrdc1-201ENSMUST00000028349 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Hcfc1Q61191 Zfp24-203ENSMUST00000153337 1513 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Hcfc1Q61191 Pus1-204ENSMUST00000112426 1389 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Hcfc1Q61191 Donson-201ENSMUST00000023682 2360 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Hcfc1Q61191 Zfp385b-204ENSMUST00000111831 2734 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
Hcfc1Q61191 Trim14-202ENSMUST00000102924 1582 ntTSL 2 BASIC14.34□□□□□ -0.11
Hcfc1Q61191 Mier2-212ENSMUST00000172158 1400 ntTSL 5 BASIC14.34□□□□□ -0.11
Hcfc1Q61191 Lrriq4-203ENSMUST00000172350 1797 ntAPPRIS P3 TSL 5 BASIC14.34□□□□□ -0.11
Hcfc1Q61191 2810030D12Rik-203ENSMUST00000190461 1039 ntBASIC14.34□□□□□ -0.11
Hcfc1Q61191 4930451I11Rik-201ENSMUST00000061695 481 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Hcfc1Q61191 Sec61b-201ENSMUST00000065678 564 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Hcfc1Q61191 Tpm1-215ENSMUST00000113705 1759 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Hcfc1Q61191 Sfrp2-201ENSMUST00000029625 2003 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Hcfc1Q61191 Ralgps2-205ENSMUST00000185198 2229 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Hcfc1Q61191 Enkd1-201ENSMUST00000013299 1275 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Hcfc1Q61191 Apopt1-204ENSMUST00000163220 671 ntAPPRIS ALT2 TSL 2 BASIC14.33□□□□□ -0.12
Hcfc1Q61191 1600014C10Rik-209ENSMUST00000179992 568 ntTSL 3 BASIC14.33□□□□□ -0.12
Hcfc1Q61191 Gm29629-201ENSMUST00000187926 386 ntTSL 3 BASIC14.33□□□□□ -0.12
Hcfc1Q61191 Gm42802-201ENSMUST00000202475 456 ntTSL 2 BASIC14.33□□□□□ -0.12
Hcfc1Q61191 Ndufb9-201ENSMUST00000022980 704 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Hcfc1Q61191 Tal1-204ENSMUST00000162489 2894 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Hcfc1Q61191 Macrod2-207ENSMUST00000110067 4730 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
Hcfc1Q61191 Patz1-203ENSMUST00000094471 2930 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Hcfc1Q61191 Jmy-201ENSMUST00000065537 8776 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Hcfc1Q61191 Ero1lb-203ENSMUST00000221560 1964 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Hcfc1Q61191 Mmp24-201ENSMUST00000029141 4306 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Hcfc1Q61191 Gm12359-201ENSMUST00000139017 1399 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Hcfc1Q61191 Fam118a-201ENSMUST00000023069 2543 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Hcfc1Q61191 Adcy9-203ENSMUST00000120080 4974 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Hcfc1Q61191 Pdss2-201ENSMUST00000095725 2127 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Hcfc1Q61191 Irak2-203ENSMUST00000089023 1734 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Hcfc1Q61191 4930570G19Rik-204ENSMUST00000149387 986 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Hcfc1Q61191 Hint3-203ENSMUST00000161074 875 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Hcfc1Q61191 4930515G01Rik-201ENSMUST00000173208 1247 ntBASIC14.32□□□□□ -0.12
Hcfc1Q61191 1700001G17Rik-201ENSMUST00000191779 889 ntBASIC14.32□□□□□ -0.12
Hcfc1Q61191 Tbcc-201ENSMUST00000040434 1164 ntAPPRIS P1 BASIC14.32□□□□□ -0.12
Hcfc1Q61191 Glmn-201ENSMUST00000078021 2015 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Hcfc1Q61191 Ocel1-201ENSMUST00000002469 1611 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Hcfc1Q61191 Phf14-201ENSMUST00000090632 3985 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Hcfc1Q61191 Gpr6-201ENSMUST00000061796 1786 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Hcfc1Q61191 Wdsub1-201ENSMUST00000028368 2072 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Hcfc1Q61191 0610009B22Rik-202ENSMUST00000109098 892 ntAPPRIS P1 TSL 3 BASIC14.32□□□□□ -0.12
Hcfc1Q61191 Mtif3-201ENSMUST00000016654 2131 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Hcfc1Q61191 Lmo1-203ENSMUST00000208136 772 ntTSL 2 BASIC14.32□□□□□ -0.12
Hcfc1Q61191 Tac4-201ENSMUST00000021242 1251 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Hcfc1Q61191 Nudt14-203ENSMUST00000221497 355 ntTSL 2 BASIC14.32□□□□□ -0.12
Hcfc1Q61191 Fcnb-201ENSMUST00000028179 1170 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Hcfc1Q61191 Izumo1r-201ENSMUST00000034409 1291 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Hcfc1Q61191 Sf3b6-201ENSMUST00000046207 1180 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Hcfc1Q61191 Gm5617-201ENSMUST00000048824 531 ntAPPRIS P1 BASIC14.32□□□□□ -0.12
Hcfc1Q61191 Jdp2-202ENSMUST00000171754 1559 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Hcfc1Q61191 Fzd2-201ENSMUST00000057893 3663 ntAPPRIS P1 BASIC14.32□□□□□ -0.12
Hcfc1Q61191 Ppan-201ENSMUST00000004203 1670 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Hcfc1Q61191 Ppil3-204ENSMUST00000117069 1363 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Hcfc1Q61191 Cnot6-203ENSMUST00000145353 5736 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
Hcfc1Q61191 Casp8-204ENSMUST00000191201 1849 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 28.9 ms