Protein–RNA interactions for Protein: Q5R1I9

Trav2, T cell receptor alpha variable 2 (Fragment), mousemouse

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav2Q5R1I9 4930544I03Rik-201ENSMUST00000181184 1276 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Trav2Q5R1I9 Pdxk-ps-203ENSMUST00000183934 680 ntTSL 3 BASIC13.67□□□□□ -0.22
Trav2Q5R1I9 Gm17949-201ENSMUST00000210548 1179 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
Trav2Q5R1I9 Gm18032-201ENSMUST00000222541 538 ntBASIC13.67□□□□□ -0.22
Trav2Q5R1I9 Eif3h-201ENSMUST00000022925 1295 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trav2Q5R1I9 Mrpl28-201ENSMUST00000025014 1048 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trav2Q5R1I9 Hist1h2bq-202ENSMUST00000091749 1254 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Trav2Q5R1I9 Mycbp-202ENSMUST00000106202 1536 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Trav2Q5R1I9 A530016L24Rik-202ENSMUST00000223266 1547 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Trav2Q5R1I9 Atp9a-211ENSMUST00000178504 3668 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
Trav2Q5R1I9 Mfsd14a-201ENSMUST00000029570 2782 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trav2Q5R1I9 Mtmr3-202ENSMUST00000109943 5674 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trav2Q5R1I9 Nectin3-202ENSMUST00000023335 9116 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trav2Q5R1I9 Timm17b-201ENSMUST00000033498 2381 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trav2Q5R1I9 Ncoa1-201ENSMUST00000085814 7329 ntAPPRIS P2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trav2Q5R1I9 Pomgnt2-207ENSMUST00000217610 2413 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trav2Q5R1I9 Nfatc2-205ENSMUST00000137451 2369 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Trav2Q5R1I9 Pagr1a-202ENSMUST00000200948 1430 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trav2Q5R1I9 Gm42742-205ENSMUST00000202798 1412 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trav2Q5R1I9 Crlf3-201ENSMUST00000061283 2396 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trav2Q5R1I9 Pomgnt2-201ENSMUST00000084743 2365 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trav2Q5R1I9 Aldh2-202ENSMUST00000129753 1799 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Trav2Q5R1I9 Inpp4a-201ENSMUST00000027287 5691 ntAPPRIS P2 TSL 5 BASIC13.66□□□□□ -0.22
Trav2Q5R1I9 Eif3b-201ENSMUST00000100507 2945 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trav2Q5R1I9 Fam199x-201ENSMUST00000047852 8299 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trav2Q5R1I9 Nipa2-202ENSMUST00000117812 3039 ntAPPRIS P1 TSL 2 BASIC13.66□□□□□ -0.22
Trav2Q5R1I9 Vangl2-203ENSMUST00000111264 2349 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Trav2Q5R1I9 Gm1673-202ENSMUST00000114382 451 ntAPPRIS ALT2 TSL 2 BASIC13.66□□□□□ -0.22
Trav2Q5R1I9 Gm22697-201ENSMUST00000175194 63 ntBASIC13.66□□□□□ -0.22
Trav2Q5R1I9 Gm4217-201ENSMUST00000182243 1002 ntBASIC13.66□□□□□ -0.22
Trav2Q5R1I9 Cnn1-203ENSMUST00000214601 1225 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Trav2Q5R1I9 Gng11-201ENSMUST00000031670 919 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trav2Q5R1I9 Rpl39l-201ENSMUST00000044103 805 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trav2Q5R1I9 Lce1h-201ENSMUST00000051521 706 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trav2Q5R1I9 Elac2-203ENSMUST00000108697 2612 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
Trav2Q5R1I9 Dhh-201ENSMUST00000023737 2363 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trav2Q5R1I9 Carmn-201ENSMUST00000181155 1778 ntTSL 2 BASIC13.66□□□□□ -0.22
Trav2Q5R1I9 Gm19721-201ENSMUST00000195284 1764 ntBASIC13.66□□□□□ -0.22
Trav2Q5R1I9 Tia1-203ENSMUST00000095754 1789 ntAPPRIS ALT1 TSL 5 BASIC13.66□□□□□ -0.22
Trav2Q5R1I9 Cux1-206ENSMUST00000176172 4882 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trav2Q5R1I9 Slc30a10-201ENSMUST00000061093 5836 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trav2Q5R1I9 Lrrc57-204ENSMUST00000102499 1961 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trav2Q5R1I9 Meg3-201ENSMUST00000124106 1988 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Trav2Q5R1I9 Braf-201ENSMUST00000002487 9728 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trav2Q5R1I9 Pdcl3-201ENSMUST00000027247 3914 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trav2Q5R1I9 Skap1-203ENSMUST00000100521 1539 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Trav2Q5R1I9 Skap1-204ENSMUST00000103154 1507 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trav2Q5R1I9 Hoxb2-201ENSMUST00000100523 1628 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trav2Q5R1I9 Pigw-201ENSMUST00000067058 2675 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trav2Q5R1I9 Bpnt1-202ENSMUST00000110965 1046 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Trav2Q5R1I9 Cdpf1-204ENSMUST00000144067 761 ntAPPRIS P1 TSL 2 BASIC13.65□□□□□ -0.22
Trav2Q5R1I9 H2afz-207ENSMUST00000174561 810 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Trav2Q5R1I9 Cdca7l-201ENSMUST00000021592 2957 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trav2Q5R1I9 Pih1d1-201ENSMUST00000085375 1185 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trav2Q5R1I9 Gabbr1-202ENSMUST00000172789 1460 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Trav2Q5R1I9 Gm11373-201ENSMUST00000129791 2819 ntTSL 5 BASIC13.65□□□□□ -0.22
Trav2Q5R1I9 Csf1-203ENSMUST00000120243 2097 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trav2Q5R1I9 Rftn1-201ENSMUST00000044503 4029 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trav2Q5R1I9 Mfsd4a-203ENSMUST00000112370 2565 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Trav2Q5R1I9 Kif7-202ENSMUST00000178048 4524 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trav2Q5R1I9 Zfp512b-201ENSMUST00000108789 5714 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.23
Trav2Q5R1I9 Praf2-201ENSMUST00000033489 1339 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trav2Q5R1I9 Ing4-205ENSMUST00000140131 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trav2Q5R1I9 Zdhhc16-201ENSMUST00000026154 1821 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trav2Q5R1I9 Mbnl1-201ENSMUST00000099087 5655 ntAPPRIS P2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trav2Q5R1I9 Rbm33-204ENSMUST00000114884 6256 ntAPPRIS ALT2 TSL 5 BASIC13.64□□□□□ -0.23
Trav2Q5R1I9 Rbms1-209ENSMUST00000164147 2543 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Trav2Q5R1I9 Ykt6-201ENSMUST00000002818 2541 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trav2Q5R1I9 Acbd3-201ENSMUST00000027780 3471 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trav2Q5R1I9 Nectin2-202ENSMUST00000108450 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trav2Q5R1I9 Tgds-201ENSMUST00000022727 1682 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trav2Q5R1I9 Acvr1c-204ENSMUST00000112608 1497 ntAPPRIS ALT2 TSL 5 BASIC13.64□□□□□ -0.23
Trav2Q5R1I9 Gm15408-201ENSMUST00000124198 1379 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Trav2Q5R1I9 March11-203ENSMUST00000152841 1365 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trav2Q5R1I9 Nxt1-202ENSMUST00000109961 1116 ntAPPRIS P1 TSL 2 BASIC13.64□□□□□ -0.23
Trav2Q5R1I9 Gmcl1-202ENSMUST00000113679 960 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Trav2Q5R1I9 Pabpc1l2b-ps-201ENSMUST00000124538 690 ntBASIC13.64□□□□□ -0.23
Trav2Q5R1I9 Gm6659-201ENSMUST00000174752 547 ntBASIC13.64□□□□□ -0.23
Trav2Q5R1I9 Aga-203ENSMUST00000211424 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trav2Q5R1I9 Nxt1-201ENSMUST00000047177 956 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trav2Q5R1I9 Hoxa6-201ENSMUST00000062829 874 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trav2Q5R1I9 Mzt1-201ENSMUST00000042662 2240 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trav2Q5R1I9 Cobll1-205ENSMUST00000112431 5024 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trav2Q5R1I9 Nudt17-204ENSMUST00000200387 2108 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Trav2Q5R1I9 Eme2-202ENSMUST00000121542 1521 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trav2Q5R1I9 Ctsf-201ENSMUST00000119694 1975 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trav2Q5R1I9 Shroom3-204ENSMUST00000168878 5630 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Trav2Q5R1I9 Gm5953-201ENSMUST00000220644 2616 ntBASIC13.63□□□□□ -0.23
Trav2Q5R1I9 Snrnp48-201ENSMUST00000091641 1785 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trav2Q5R1I9 St3gal2-201ENSMUST00000034197 4396 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trav2Q5R1I9 Prss53-202ENSMUST00000205300 1662 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Trav2Q5R1I9 Acbd6-201ENSMUST00000035560 5592 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trav2Q5R1I9 Mark3-201ENSMUST00000075281 3321 ntAPPRIS P2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trav2Q5R1I9 Ptges3l-202ENSMUST00000103102 1463 ntAPPRIS P2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trav2Q5R1I9 Lhx6-208ENSMUST00000148852 1481 ntTSL 5 BASIC13.63□□□□□ -0.23
Trav2Q5R1I9 Yipf3-201ENSMUST00000095263 2035 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trav2Q5R1I9 Lhx6-203ENSMUST00000112963 3481 ntTSL 2 BASIC13.63□□□□□ -0.23
Trav2Q5R1I9 Prpsap1-201ENSMUST00000106391 1841 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trav2Q5R1I9 Tlcd2-202ENSMUST00000108435 1112 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trav2Q5R1I9 Hmga1-206ENSMUST00000119486 1003 ntAPPRIS P3 TSL 2 BASIC13.63□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 18.7 ms