Protein–RNA interactions for Protein: Q5R1H8

Trav8d-1, T cell receptor alpha variable 8D-1 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav8d-1Q5R1H8 Fez2-202ENSMUST00000112487 2020 ntAPPRIS ALT1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trav8d-1Q5R1H8 Prr14-201ENSMUST00000033095 2402 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trav8d-1Q5R1H8 Mrpl57-201ENSMUST00000022538 2877 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trav8d-1Q5R1H8 Ift74-201ENSMUST00000030311 2139 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
Trav8d-1Q5R1H8 Gas6-201ENSMUST00000033828 2548 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trav8d-1Q5R1H8 Bicdl1-201ENSMUST00000055408 3026 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trav8d-1Q5R1H8 Pcbp1-201ENSMUST00000053015 1830 ntAPPRIS P1 BASIC14.06□□□□□ -0.16
Trav8d-1Q5R1H8 Cul1-201ENSMUST00000031697 3161 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trav8d-1Q5R1H8 Trim8-201ENSMUST00000026008 3230 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trav8d-1Q5R1H8 Rbpms-201ENSMUST00000033994 2375 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Trav8d-1Q5R1H8 Sema6c-214ENSMUST00000202315 2843 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trav8d-1Q5R1H8 Bcam-201ENSMUST00000003061 2429 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trav8d-1Q5R1H8 Papolb-201ENSMUST00000099400 4239 ntAPPRIS P1 BASIC14.05□□□□□ -0.16
Trav8d-1Q5R1H8 E230025N22Rik-201ENSMUST00000115682 2016 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trav8d-1Q5R1H8 Sox4-201ENSMUST00000067230 4795 ntAPPRIS P1 BASIC14.05□□□□□ -0.16
Trav8d-1Q5R1H8 Tex261-201ENSMUST00000014892 2984 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trav8d-1Q5R1H8 Zpr1-206ENSMUST00000156440 2984 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trav8d-1Q5R1H8 Capzb-202ENSMUST00000042675 1604 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Trav8d-1Q5R1H8 Cfap36-201ENSMUST00000020754 1664 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trav8d-1Q5R1H8 Urgcp-206ENSMUST00000170116 5528 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
Trav8d-1Q5R1H8 Stxbp6-201ENSMUST00000053768 4553 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
Trav8d-1Q5R1H8 1700003N22Rik-201ENSMUST00000194834 808 ntBASIC14.05□□□□□ -0.16
Trav8d-1Q5R1H8 Zfand3-202ENSMUST00000226208 923 ntAPPRIS P1 BASIC14.05□□□□□ -0.16
Trav8d-1Q5R1H8 Grrp1-201ENSMUST00000060050 1226 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trav8d-1Q5R1H8 Rtl8b-201ENSMUST00000088778 1232 ntAPPRIS P1 BASIC14.05□□□□□ -0.16
Trav8d-1Q5R1H8 Nepro-201ENSMUST00000048788 2866 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trav8d-1Q5R1H8 Slain1-201ENSMUST00000069443 2863 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trav8d-1Q5R1H8 Ppt2-204ENSMUST00000168391 1342 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
Trav8d-1Q5R1H8 Smad3-201ENSMUST00000034973 5090 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trav8d-1Q5R1H8 Btbd1-201ENSMUST00000026093 3001 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trav8d-1Q5R1H8 Shank3-202ENSMUST00000066545 4702 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Trav8d-1Q5R1H8 Ttc13-202ENSMUST00000117624 3096 ntTSL 5 BASIC14.05□□□□□ -0.16
Trav8d-1Q5R1H8 Txndc11-201ENSMUST00000038424 3095 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trav8d-1Q5R1H8 Cdc42ep3-201ENSMUST00000068958 1967 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trav8d-1Q5R1H8 Snrk-201ENSMUST00000118886 4811 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trav8d-1Q5R1H8 Dleu2-208ENSMUST00000182768 1442 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Trav8d-1Q5R1H8 Bcor-203ENSMUST00000115512 6887 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trav8d-1Q5R1H8 Arhgap8-201ENSMUST00000006029 1527 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
Trav8d-1Q5R1H8 Tuba3a-201ENSMUST00000088246 1509 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trav8d-1Q5R1H8 Adam22-201ENSMUST00000046838 2773 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trav8d-1Q5R1H8 AC165249.1-201ENSMUST00000220031 1599 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Trav8d-1Q5R1H8 Nrbp1-207ENSMUST00000202576 2221 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Trav8d-1Q5R1H8 Nrbp1-201ENSMUST00000031034 2203 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trav8d-1Q5R1H8 Ptprn-201ENSMUST00000027404 3554 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trav8d-1Q5R1H8 Wnt1-201ENSMUST00000023734 2378 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trav8d-1Q5R1H8 Rps6ka1-201ENSMUST00000003741 3085 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Trav8d-1Q5R1H8 6430548M08Rik-201ENSMUST00000034281 5564 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trav8d-1Q5R1H8 Pnpt1-201ENSMUST00000020756 2707 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trav8d-1Q5R1H8 Anapc7-201ENSMUST00000031422 2751 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trav8d-1Q5R1H8 Matr3-214ENSMUST00000190029 2845 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
Trav8d-1Q5R1H8 Gm6211-202ENSMUST00000167849 925 ntBASIC14.04□□□□□ -0.16
Trav8d-1Q5R1H8 Nudt17-204ENSMUST00000200387 2108 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Trav8d-1Q5R1H8 Arl10-201ENSMUST00000026988 1046 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trav8d-1Q5R1H8 Rcc2-202ENSMUST00000071169 3999 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trav8d-1Q5R1H8 Chtop-207ENSMUST00000107346 1321 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Trav8d-1Q5R1H8 Caml-201ENSMUST00000021963 1382 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trav8d-1Q5R1H8 Lrrfip2-201ENSMUST00000035078 3260 ntTSL 5 BASIC14.04□□□□□ -0.16
Trav8d-1Q5R1H8 Kcnab3-201ENSMUST00000018614 2538 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trav8d-1Q5R1H8 Sptbn4-203ENSMUST00000108363 4724 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Trav8d-1Q5R1H8 Sptbn4-204ENSMUST00000108364 4740 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Trav8d-1Q5R1H8 Ssbp2-202ENSMUST00000042122 1633 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Trav8d-1Q5R1H8 P2rx4-201ENSMUST00000031429 2702 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trav8d-1Q5R1H8 Zbtb2-201ENSMUST00000100077 3086 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trav8d-1Q5R1H8 Mdfic-202ENSMUST00000120512 1871 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trav8d-1Q5R1H8 Cacna1h-202ENSMUST00000159048 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trav8d-1Q5R1H8 Naa50-204ENSMUST00000161326 4487 ntAPPRIS ALT1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trav8d-1Q5R1H8 Gnaz-201ENSMUST00000037813 3519 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trav8d-1Q5R1H8 Disp3-201ENSMUST00000047720 5282 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
Trav8d-1Q5R1H8 Fam129c-208ENSMUST00000143662 2267 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
Trav8d-1Q5R1H8 Bcor-202ENSMUST00000065143 6839 ntAPPRIS P4 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trav8d-1Q5R1H8 Aste1-202ENSMUST00000123807 2349 ntAPPRIS ALT2 TSL 2 BASIC14.03□□□□□ -0.16
Trav8d-1Q5R1H8 Pou3f2-201ENSMUST00000178174 5587 ntAPPRIS P1 BASIC14.03□□□□□ -0.16
Trav8d-1Q5R1H8 Agap1-204ENSMUST00000190096 4078 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trav8d-1Q5R1H8 Pigs-201ENSMUST00000048073 2501 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trav8d-1Q5R1H8 Zdhhc18-201ENSMUST00000084238 4580 ntAPPRIS P1 TSL 2 BASIC14.03□□□□□ -0.16
Trav8d-1Q5R1H8 Nsmf-207ENSMUST00000116574 2863 ntTSL 5 BASIC14.03□□□□□ -0.16
Trav8d-1Q5R1H8 Ripk1-201ENSMUST00000021844 3266 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trav8d-1Q5R1H8 Elf2-201ENSMUST00000062009 3353 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trav8d-1Q5R1H8 Rcc2-201ENSMUST00000038893 3767 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trav8d-1Q5R1H8 Mgll-203ENSMUST00000113582 1034 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Trav8d-1Q5R1H8 Cldn3-201ENSMUST00000094245 1259 ntAPPRIS P1 BASIC14.03□□□□□ -0.16
Trav8d-1Q5R1H8 Prr22-201ENSMUST00000168666 1350 ntAPPRIS P1 TSL 3 BASIC14.03□□□□□ -0.16
Trav8d-1Q5R1H8 Ppp4r3a-201ENSMUST00000048305 4516 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trav8d-1Q5R1H8 Emc8-201ENSMUST00000034277 4942 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trav8d-1Q5R1H8 Gm16401-202ENSMUST00000197463 2074 ntBASIC14.03□□□□□ -0.16
Trav8d-1Q5R1H8 Mycs-201ENSMUST00000058404 2368 ntAPPRIS P1 BASIC14.03□□□□□ -0.16
Trav8d-1Q5R1H8 Tead3-201ENSMUST00000114799 2448 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trav8d-1Q5R1H8 Dtx2-203ENSMUST00000111144 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trav8d-1Q5R1H8 Krt9-201ENSMUST00000059707 2580 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trav8d-1Q5R1H8 F830208F22Rik-202ENSMUST00000143732 2891 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Trav8d-1Q5R1H8 Map6-207ENSMUST00000208924 2906 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trav8d-1Q5R1H8 2210016F16Rik-201ENSMUST00000022032 3051 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trav8d-1Q5R1H8 Seh1l-201ENSMUST00000025421 3516 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trav8d-1Q5R1H8 Anks6-201ENSMUST00000084616 3552 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
Trav8d-1Q5R1H8 Atp1a1-201ENSMUST00000036493 3679 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trav8d-1Q5R1H8 Zpbp-201ENSMUST00000020413 4248 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trav8d-1Q5R1H8 Eefsec-201ENSMUST00000165242 2679 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Trav8d-1Q5R1H8 Galk1-201ENSMUST00000021114 1406 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Trav8d-1Q5R1H8 Akr1a1-201ENSMUST00000030455 1420 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Trav8d-1Q5R1H8 Gdf1-201ENSMUST00000207684 1349 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 36.6 ms