Protein–RNA interactions for Protein: Q5R1D2

Trav15-1-dv6-1, T cell receptor alpha variable 15-1-DV6-1 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav15-1-dv6-1Q5R1D2 Sptbn4-203ENSMUST00000108363 4724 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Trav15-1-dv6-1Q5R1D2 Sptbn4-204ENSMUST00000108364 4740 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Trav15-1-dv6-1Q5R1D2 Emc8-201ENSMUST00000034277 4942 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trav15-1-dv6-1Q5R1D2 Tapt1-201ENSMUST00000055128 3513 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
Trav15-1-dv6-1Q5R1D2 Hbs1l-203ENSMUST00000092674 2625 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Trav15-1-dv6-1Q5R1D2 Gm16499-203ENSMUST00000204633 2177 ntBASIC13.34□□□□□ -0.27
Trav15-1-dv6-1Q5R1D2 Pds5b-208ENSMUST00000202170 6598 ntAPPRIS ALT2 TSL 5 BASIC13.34□□□□□ -0.27
Trav15-1-dv6-1Q5R1D2 Rap1gap-202ENSMUST00000097837 3168 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trav15-1-dv6-1Q5R1D2 Alad-202ENSMUST00000107444 1247 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trav15-1-dv6-1Q5R1D2 Tgfbr3l-201ENSMUST00000110993 1075 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
Trav15-1-dv6-1Q5R1D2 Gm13790-201ENSMUST00000156209 473 ntTSL 3 BASIC13.34□□□□□ -0.27
Trav15-1-dv6-1Q5R1D2 Foxi3-202ENSMUST00000163089 1278 ntAPPRIS ALT2 TSL 5 BASIC13.34□□□□□ -0.27
Trav15-1-dv6-1Q5R1D2 Gm42778-201ENSMUST00000199644 553 ntBASIC13.34□□□□□ -0.27
Trav15-1-dv6-1Q5R1D2 Gm34933-201ENSMUST00000203245 1067 ntTSL 5 BASIC13.34□□□□□ -0.27
Trav15-1-dv6-1Q5R1D2 4933406B15Rik-201ENSMUST00000220065 1182 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Trav15-1-dv6-1Q5R1D2 Tmem171-201ENSMUST00000064347 1161 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trav15-1-dv6-1Q5R1D2 Foxi3-201ENSMUST00000069634 1206 ntAPPRIS P2 TSL 5 BASIC13.34□□□□□ -0.27
Trav15-1-dv6-1Q5R1D2 Atxn7l3-201ENSMUST00000073234 3688 ntAPPRIS ALT1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trav15-1-dv6-1Q5R1D2 Nipsnap1-201ENSMUST00000038570 1926 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trav15-1-dv6-1Q5R1D2 Clk4-201ENSMUST00000093132 1949 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trav15-1-dv6-1Q5R1D2 Galnt13-202ENSMUST00000112634 7639 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Trav15-1-dv6-1Q5R1D2 Umad1-202ENSMUST00000159335 2615 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trav15-1-dv6-1Q5R1D2 Flt1-203ENSMUST00000110529 6292 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Trav15-1-dv6-1Q5R1D2 Dancr-204ENSMUST00000132389 2347 ntBASIC13.34□□□□□ -0.27
Trav15-1-dv6-1Q5R1D2 Sept4-205ENSMUST00000107962 1678 ntAPPRIS ALT1 TSL 5 BASIC13.34□□□□□ -0.27
Trav15-1-dv6-1Q5R1D2 Rpf1-201ENSMUST00000029838 1661 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trav15-1-dv6-1Q5R1D2 Pde3b-201ENSMUST00000032909 6573 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trav15-1-dv6-1Q5R1D2 Phax-202ENSMUST00000130163 1386 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.27
Trav15-1-dv6-1Q5R1D2 Opn4-202ENSMUST00000168444 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.27
Trav15-1-dv6-1Q5R1D2 Papolb-201ENSMUST00000099400 4239 ntAPPRIS P1 BASIC13.33□□□□□ -0.28
Trav15-1-dv6-1Q5R1D2 Sec61a1-201ENSMUST00000032168 3172 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Trav15-1-dv6-1Q5R1D2 Mef2d-203ENSMUST00000107559 1791 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Trav15-1-dv6-1Q5R1D2 6430548M08Rik-204ENSMUST00000108951 5531 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Trav15-1-dv6-1Q5R1D2 Rasip1-201ENSMUST00000057927 3202 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Trav15-1-dv6-1Q5R1D2 Gm4425-201ENSMUST00000172838 2857 ntTSL 2 BASIC13.33□□□□□ -0.28
Trav15-1-dv6-1Q5R1D2 Hmga1-205ENSMUST00000118599 529 ntAPPRIS P3 TSL 3 BASIC13.33□□□□□ -0.28
Trav15-1-dv6-1Q5R1D2 Ypel3-210ENSMUST00000170882 1050 ntAPPRIS P1 TSL 3 BASIC13.33□□□□□ -0.28
Trav15-1-dv6-1Q5R1D2 Neurl1b-203ENSMUST00000183077 1084 ntTSL 5 BASIC13.33□□□□□ -0.28
Trav15-1-dv6-1Q5R1D2 Bag1-204ENSMUST00000215842 1068 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.28
Trav15-1-dv6-1Q5R1D2 AC122379.1-201ENSMUST00000220658 355 ntTSL 3 BASIC13.33□□□□□ -0.28
Trav15-1-dv6-1Q5R1D2 Nr1h2-204ENSMUST00000107912 1839 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.28
Trav15-1-dv6-1Q5R1D2 Slc30a2-201ENSMUST00000081094 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Trav15-1-dv6-1Q5R1D2 Nsun5-201ENSMUST00000000940 2243 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Trav15-1-dv6-1Q5R1D2 Mfsd4b1-201ENSMUST00000163705 2677 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Trav15-1-dv6-1Q5R1D2 Cacna1i-202ENSMUST00000160424 9781 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Trav15-1-dv6-1Q5R1D2 Zfp691-204ENSMUST00000179290 1721 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Trav15-1-dv6-1Q5R1D2 Hapln2-201ENSMUST00000005014 1711 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Trav15-1-dv6-1Q5R1D2 Gas6-201ENSMUST00000033828 2548 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Trav15-1-dv6-1Q5R1D2 Rab20-201ENSMUST00000033900 1392 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trav15-1-dv6-1Q5R1D2 Zbtb45-201ENSMUST00000051390 2171 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trav15-1-dv6-1Q5R1D2 Relb-201ENSMUST00000049912 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trav15-1-dv6-1Q5R1D2 Atp5d-203ENSMUST00000105367 1410 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
Trav15-1-dv6-1Q5R1D2 Mbnl1-201ENSMUST00000099087 5655 ntAPPRIS P2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trav15-1-dv6-1Q5R1D2 Polr2j-202ENSMUST00000111127 900 ntTSL 2 BASIC13.32□□□□□ -0.28
Trav15-1-dv6-1Q5R1D2 Dlx6-203ENSMUST00000171311 1071 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trav15-1-dv6-1Q5R1D2 Gm27027-201ENSMUST00000183110 547 ntAPPRIS P1 TSL 3 BASIC13.32□□□□□ -0.28
Trav15-1-dv6-1Q5R1D2 Ppp1cb-206ENSMUST00000202078 383 ntTSL 5 BASIC13.32□□□□□ -0.28
Trav15-1-dv6-1Q5R1D2 Cep152-201ENSMUST00000089776 5768 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trav15-1-dv6-1Q5R1D2 Wnt1-201ENSMUST00000023734 2378 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trav15-1-dv6-1Q5R1D2 Tmem229b-206ENSMUST00000174697 3697 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
Trav15-1-dv6-1Q5R1D2 Kat14-208ENSMUST00000147747 3299 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Trav15-1-dv6-1Q5R1D2 Psen2-205ENSMUST00000111108 1997 ntAPPRIS P2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trav15-1-dv6-1Q5R1D2 Osbpl1a-208ENSMUST00000121888 2674 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Trav15-1-dv6-1Q5R1D2 Gm26821-201ENSMUST00000181954 2652 ntTSL 5 BASIC13.32□□□□□ -0.28
Trav15-1-dv6-1Q5R1D2 Stambpl1-201ENSMUST00000054956 2024 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trav15-1-dv6-1Q5R1D2 Agbl5-208ENSMUST00000201168 3199 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
Trav15-1-dv6-1Q5R1D2 Cadps2-205ENSMUST00000115358 4848 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
Trav15-1-dv6-1Q5R1D2 Zkscan3-208ENSMUST00000224820 5398 ntBASIC13.31□□□□□ -0.28
Trav15-1-dv6-1Q5R1D2 Slc43a1-202ENSMUST00000111624 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trav15-1-dv6-1Q5R1D2 Pdk3-201ENSMUST00000045748 2115 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trav15-1-dv6-1Q5R1D2 Ppp4r3a-201ENSMUST00000048305 4516 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trav15-1-dv6-1Q5R1D2 Rab7-202ENSMUST00000113596 1657 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trav15-1-dv6-1Q5R1D2 Stard7-202ENSMUST00000110375 3116 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trav15-1-dv6-1Q5R1D2 Magi1-201ENSMUST00000055224 7007 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Trav15-1-dv6-1Q5R1D2 Adra2c-201ENSMUST00000049545 3445 ntAPPRIS P1 BASIC13.31□□□□□ -0.28
Trav15-1-dv6-1Q5R1D2 Arhgap42-203ENSMUST00000183182 1458 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Trav15-1-dv6-1Q5R1D2 Dtx2-203ENSMUST00000111144 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trav15-1-dv6-1Q5R1D2 Mmp11-201ENSMUST00000000924 2288 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trav15-1-dv6-1Q5R1D2 3110062M04Rik-202ENSMUST00000115006 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trav15-1-dv6-1Q5R1D2 Pacs1-201ENSMUST00000025786 4339 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trav15-1-dv6-1Q5R1D2 Fbxl21-202ENSMUST00000121095 798 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Trav15-1-dv6-1Q5R1D2 Mpig6b-202ENSMUST00000174190 729 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trav15-1-dv6-1Q5R1D2 Dvl3-204ENSMUST00000171774 2319 ntTSL 5 BASIC13.31□□□□□ -0.28
Trav15-1-dv6-1Q5R1D2 March2-201ENSMUST00000066121 3400 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Trav15-1-dv6-1Q5R1D2 Kif21a-204ENSMUST00000109287 6124 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trav15-1-dv6-1Q5R1D2 Kif21a-205ENSMUST00000109288 6142 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trav15-1-dv6-1Q5R1D2 Mettl21a-201ENSMUST00000053469 2666 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trav15-1-dv6-1Q5R1D2 Eif4g1-202ENSMUST00000073840 5394 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
Trav15-1-dv6-1Q5R1D2 Ccnyl1-202ENSMUST00000114077 3281 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Trav15-1-dv6-1Q5R1D2 Zfp367-202ENSMUST00000117241 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trav15-1-dv6-1Q5R1D2 Tm9sf1-205ENSMUST00000122358 2517 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trav15-1-dv6-1Q5R1D2 Kcnk4-201ENSMUST00000025908 1715 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trav15-1-dv6-1Q5R1D2 Ephb4-201ENSMUST00000061244 4340 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trav15-1-dv6-1Q5R1D2 Ankrd50-202ENSMUST00000120875 4945 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trav15-1-dv6-1Q5R1D2 Runx2-203ENSMUST00000113572 6463 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trav15-1-dv6-1Q5R1D2 Adgra3-201ENSMUST00000030971 4480 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trav15-1-dv6-1Q5R1D2 March8-201ENSMUST00000079012 4450 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trav15-1-dv6-1Q5R1D2 Tedc2-201ENSMUST00000024930 2166 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trav15-1-dv6-1Q5R1D2 Grwd1-201ENSMUST00000107723 1898 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trav15-1-dv6-1Q5R1D2 Chka-202ENSMUST00000072055 2549 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 30.4 ms