Protein–RNA interactions for Protein: Q571C7

Bdp1, Transcription factor TFIIIB component B'' homolog, mousemouse

Predictions only

Length 2,467 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Bdp1Q571C7 Arfrp1-203ENSMUST00000127988 2447 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Bdp1Q571C7 Maz-203ENSMUST00000205568 2650 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
Bdp1Q571C7 Stx2-201ENSMUST00000031378 2939 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
Bdp1Q571C7 Cnih3-202ENSMUST00000161880 1995 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Bdp1Q571C7 Eno1-202ENSMUST00000080926 2027 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Bdp1Q571C7 Sytl3-204ENSMUST00000159880 1296 ntTSL 5 BASIC17.37■□□□□ 0.37
Bdp1Q571C7 Ccdc88c-204ENSMUST00000223097 1253 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Bdp1Q571C7 Krt80-201ENSMUST00000077196 1774 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Bdp1Q571C7 Gtpbp6-201ENSMUST00000077220 1617 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Bdp1Q571C7 Dcbld1-201ENSMUST00000069004 3024 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Bdp1Q571C7 Helt-201ENSMUST00000058636 1541 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Bdp1Q571C7 Tctn3-202ENSMUST00000132452 1271 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Bdp1Q571C7 Chd3os-202ENSMUST00000151617 389 ntTSL 3 BASIC17.37■□□□□ 0.37
Bdp1Q571C7 Gm36972-201ENSMUST00000194000 676 ntTSL 3 BASIC17.37■□□□□ 0.37
Bdp1Q571C7 Sox10-201ENSMUST00000040019 2713 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Bdp1Q571C7 Phf7-203ENSMUST00000226565 1971 ntBASIC17.36■□□□□ 0.37
Bdp1Q571C7 Crhr2-203ENSMUST00000114374 1440 ntAPPRIS ALT1 TSL 5 BASIC17.36■□□□□ 0.37
Bdp1Q571C7 Gramd1a-201ENSMUST00000001280 2713 ntAPPRIS P2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Bdp1Q571C7 Acaa2-201ENSMUST00000041053 1515 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Bdp1Q571C7 Zic1-202ENSMUST00000065360 2811 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Bdp1Q571C7 Lamtor1-202ENSMUST00000193465 661 ntTSL 5 BASIC17.36■□□□□ 0.37
Bdp1Q571C7 Abhd18-206ENSMUST00000203650 797 ntTSL 5 BASIC17.36■□□□□ 0.37
Bdp1Q571C7 Spata18-202ENSMUST00000071077 1978 ntAPPRIS P2 TSL 5 BASIC17.36■□□□□ 0.37
Bdp1Q571C7 Ftl2-ps-201ENSMUST00000118517 552 ntBASIC17.36■□□□□ 0.37
Bdp1Q571C7 Gm6184-201ENSMUST00000120403 1261 ntBASIC17.36■□□□□ 0.37
Bdp1Q571C7 Tcp1-207ENSMUST00000143961 614 ntTSL 2 BASIC17.36■□□□□ 0.37
Bdp1Q571C7 Gm17114-201ENSMUST00000164716 511 ntTSL 3 BASIC17.36■□□□□ 0.37
Bdp1Q571C7 Gm28402-201ENSMUST00000188574 373 ntTSL 3 BASIC17.36■□□□□ 0.37
Bdp1Q571C7 Gm35911-201ENSMUST00000198837 677 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
Bdp1Q571C7 Gm8396-201ENSMUST00000057361 823 ntBASIC17.36■□□□□ 0.37
Bdp1Q571C7 Gm15590-201ENSMUST00000078419 552 ntBASIC17.36■□□□□ 0.37
Bdp1Q571C7 Prps1l3-201ENSMUST00000139049 1720 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Bdp1Q571C7 Tacstd2-201ENSMUST00000058178 1735 ntAPPRIS P1 BASIC17.36■□□□□ 0.37
Bdp1Q571C7 Rbm3-206ENSMUST00000115621 1338 ntAPPRIS ALT1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Bdp1Q571C7 Hmgb3-201ENSMUST00000015361 1544 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Bdp1Q571C7 Nfkbib-201ENSMUST00000032815 2061 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Bdp1Q571C7 Prmt2-202ENSMUST00000099571 2052 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
Bdp1Q571C7 Leng1-201ENSMUST00000019878 2222 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Bdp1Q571C7 Syt5-201ENSMUST00000065957 1750 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Bdp1Q571C7 Zfp706-201ENSMUST00000078976 4417 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Bdp1Q571C7 Dguok-202ENSMUST00000113888 1007 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Bdp1Q571C7 Dguok-201ENSMUST00000014698 1107 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Bdp1Q571C7 Rpl18a-206ENSMUST00000212709 700 ntTSL 2 BASIC17.35■□□□□ 0.37
Bdp1Q571C7 CT025535.1-201ENSMUST00000227172 491 ntBASIC17.35■□□□□ 0.37
Bdp1Q571C7 Vangl2-203ENSMUST00000111264 2349 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Bdp1Q571C7 Gm26892-201ENSMUST00000181695 1636 ntTSL 5 BASIC17.35■□□□□ 0.37
Bdp1Q571C7 Celf5-203ENSMUST00000120508 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Bdp1Q571C7 Cbx4-201ENSMUST00000026665 5179 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Bdp1Q571C7 Rabepk-202ENSMUST00000113086 1106 ntTSL 5 BASIC17.35■□□□□ 0.37
Bdp1Q571C7 1110035H17Rik-202ENSMUST00000205672 1231 ntBASIC17.35■□□□□ 0.37
Bdp1Q571C7 Nudt14-203ENSMUST00000221497 355 ntTSL 2 BASIC17.35■□□□□ 0.37
Bdp1Q571C7 Olfr541-201ENSMUST00000080681 1103 ntAPPRIS P1 BASIC17.35■□□□□ 0.37
Bdp1Q571C7 Cdk10-201ENSMUST00000036880 1642 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Bdp1Q571C7 Igf2-203ENSMUST00000105935 650 ntAPPRIS P1 TSL 3 BASIC17.34■□□□□ 0.37
Bdp1Q571C7 Ntpcr-205ENSMUST00000143504 520 ntTSL 5 BASIC17.34■□□□□ 0.37
Bdp1Q571C7 Tsfm-207ENSMUST00000152054 655 ntTSL 3 BASIC17.34■□□□□ 0.37
Bdp1Q571C7 Zbtb25-201ENSMUST00000167011 1681 ntAPPRIS P1 TSL 2 BASIC17.34■□□□□ 0.37
Bdp1Q571C7 Retsat-204ENSMUST00000176168 1203 ntTSL 5 BASIC17.34■□□□□ 0.37
Bdp1Q571C7 Cebpzos-202ENSMUST00000180077 602 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Bdp1Q571C7 Grk6-206ENSMUST00000224995 2971 ntBASIC17.34■□□□□ 0.37
Bdp1Q571C7 Lhx2-201ENSMUST00000000253 2840 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Bdp1Q571C7 Tesc-201ENSMUST00000031304 1031 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Bdp1Q571C7 Tha1-201ENSMUST00000033230 1770 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Bdp1Q571C7 Smim3-201ENSMUST00000042710 1984 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Bdp1Q571C7 Gpank1-201ENSMUST00000052167 1295 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
Bdp1Q571C7 Pmm1-202ENSMUST00000071462 1059 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Bdp1Q571C7 1700086L19Rik-201ENSMUST00000095617 706 ntBASIC17.34■□□□□ 0.37
Bdp1Q571C7 Bmpr1b-202ENSMUST00000098568 1910 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Bdp1Q571C7 5031439G07Rik-203ENSMUST00000165743 5032 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Bdp1Q571C7 Mvb12b-201ENSMUST00000041555 4998 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Bdp1Q571C7 Hoxc13-201ENSMUST00000001700 2461 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Bdp1Q571C7 Atp5c1-202ENSMUST00000114896 1735 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Bdp1Q571C7 Gtf2e2-201ENSMUST00000167264 1566 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Bdp1Q571C7 Ube2v2-202ENSMUST00000115776 1236 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
Bdp1Q571C7 Gm29791-202ENSMUST00000207888 369 ntBASIC17.33■□□□□ 0.37
Bdp1Q571C7 Irak1-205ENSMUST00000114353 1896 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.37
Bdp1Q571C7 Gm14261-201ENSMUST00000145105 1429 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Bdp1Q571C7 Psmc4-201ENSMUST00000032824 1440 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Bdp1Q571C7 Rap1b-201ENSMUST00000064667 2724 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Bdp1Q571C7 Ppp2r2d-207ENSMUST00000155672 1938 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Bdp1Q571C7 Gm13418-201ENSMUST00000119097 944 ntBASIC17.33■□□□□ 0.36
Bdp1Q571C7 Wdr61-203ENSMUST00000121204 1290 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Bdp1Q571C7 Pcp2-205ENSMUST00000142431 524 ntTSL 2 BASIC17.33■□□□□ 0.36
Bdp1Q571C7 Smad6-201ENSMUST00000041029 2971 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Bdp1Q571C7 Golph3-202ENSMUST00000226517 2359 ntBASIC17.33■□□□□ 0.36
Bdp1Q571C7 Sim1-202ENSMUST00000219436 1687 ntTSL 5 BASIC17.33■□□□□ 0.36
Bdp1Q571C7 Snai3-201ENSMUST00000006762 1628 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Bdp1Q571C7 Cog6-204ENSMUST00000193432 2078 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Bdp1Q571C7 Lhx6-208ENSMUST00000148852 1481 ntTSL 5 BASIC17.33■□□□□ 0.36
Bdp1Q571C7 Fis1-202ENSMUST00000111094 948 ntTSL 2 BASIC17.32■□□□□ 0.36
Bdp1Q571C7 Mecp2-204ENSMUST00000140399 1168 ntTSL 5 BASIC17.32■□□□□ 0.36
Bdp1Q571C7 Taco1os-201ENSMUST00000140736 644 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Bdp1Q571C7 1700023H06Rik-201ENSMUST00000161006 1044 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Bdp1Q571C7 Tm7sf2-209ENSMUST00000161528 732 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Bdp1Q571C7 Gm4535-201ENSMUST00000182274 558 ntBASIC17.32■□□□□ 0.36
Bdp1Q571C7 9230110C19Rik-202ENSMUST00000215478 533 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Bdp1Q571C7 AC140375.2-201ENSMUST00000225283 584 ntBASIC17.32■□□□□ 0.36
Bdp1Q571C7 Rangrf-201ENSMUST00000038644 820 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Bdp1Q571C7 Gm10355-201ENSMUST00000097146 517 ntBASIC17.32■□□□□ 0.36
Bdp1Q571C7 Tedc1-201ENSMUST00000049271 2441 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Retrieved 100 of 76,532 protein–RNA pairs in 50.4 ms