Protein–RNA interactions for Protein: Q4VA53

Pds5b, Sister chromatid cohesion protein PDS5 homolog B, mousemouse

Known RBP Predictions only

Length 1,446 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pds5bQ4VA53 Tcp1-207ENSMUST00000143961 614 ntTSL 2 BASIC29.85■■■□□ 2.37
Pds5bQ4VA53 Tmem176a-202ENSMUST00000168406 1086 ntAPPRIS P1 TSL 3 BASIC29.85■■■□□ 2.37
Pds5bQ4VA53 Rpl28-201ENSMUST00000032597 1106 ntAPPRIS P1 TSL 1 (best) BASIC29.85■■■□□ 2.37
Pds5bQ4VA53 Gm15500-202ENSMUST00000071641 1019 ntBASIC29.85■■■□□ 2.37
Pds5bQ4VA53 Kiz-201ENSMUST00000099278 2183 ntAPPRIS P1 TSL 1 (best) BASIC29.84■■■□□ 2.37
Pds5bQ4VA53 Gm26837-201ENSMUST00000180821 2110 ntTSL 5 BASIC29.84■■■□□ 2.37
Pds5bQ4VA53 Ocel1-201ENSMUST00000002469 1611 ntAPPRIS P1 TSL 1 (best) BASIC29.84■■■□□ 2.37
Pds5bQ4VA53 Gm26825-201ENSMUST00000181751 2026 ntTSL 5 BASIC29.84■■■□□ 2.37
Pds5bQ4VA53 Tmem208-201ENSMUST00000015000 785 ntAPPRIS P1 TSL 1 (best) BASIC29.84■■■□□ 2.37
Pds5bQ4VA53 2810425M01Rik-201ENSMUST00000180790 1850 ntTSL 5 BASIC29.84■■■□□ 2.37
Pds5bQ4VA53 Mthfd2-201ENSMUST00000005810 2085 ntAPPRIS P1 TSL 1 (best) BASIC29.84■■■□□ 2.37
Pds5bQ4VA53 Rtn1-201ENSMUST00000021497 1544 ntAPPRIS P1 TSL 1 (best) BASIC29.83■■■□□ 2.37
Pds5bQ4VA53 Chst12-201ENSMUST00000043050 2331 ntAPPRIS P1 TSL 1 (best) BASIC29.83■■■□□ 2.37
Pds5bQ4VA53 Fuz-213ENSMUST00000209039 1453 ntTSL 5 BASIC29.83■■■□□ 2.37
Pds5bQ4VA53 Meig1-204ENSMUST00000115083 567 ntAPPRIS P1 TSL 2 BASIC29.83■■■□□ 2.37
Pds5bQ4VA53 Rhox7b-201ENSMUST00000115156 1091 ntAPPRIS P1 TSL 1 (best) BASIC29.83■■■□□ 2.37
Pds5bQ4VA53 1810062O18Rik-203ENSMUST00000129237 647 ntTSL 5 BASIC29.83■■■□□ 2.37
Pds5bQ4VA53 Flg-204ENSMUST00000178752 756 ntAPPRIS ALT2 BASIC29.83■■■□□ 2.37
Pds5bQ4VA53 1300002E11Rik-207ENSMUST00000211443 767 ntTSL 5 BASIC29.83■■■□□ 2.37
Pds5bQ4VA53 Orc6-201ENSMUST00000034132 1287 ntAPPRIS P1 TSL 1 (best) BASIC29.83■■■□□ 2.37
Pds5bQ4VA53 Rhox7a-201ENSMUST00000096454 983 ntAPPRIS P1 TSL 1 (best) BASIC29.83■■■□□ 2.37
Pds5bQ4VA53 Gm10505-201ENSMUST00000151398 1587 ntTSL 1 (best) BASIC29.83■■■□□ 2.37
Pds5bQ4VA53 Zfp264-201ENSMUST00000208656 1563 ntBASIC29.83■■■□□ 2.37
Pds5bQ4VA53 Cyp26c1-201ENSMUST00000073391 1747 ntAPPRIS P1 TSL 1 (best) BASIC29.83■■■□□ 2.37
Pds5bQ4VA53 Cdpf1-203ENSMUST00000134631 786 ntAPPRIS P1 TSL 5 BASIC29.82■■■□□ 2.36
Pds5bQ4VA53 Coro6-201ENSMUST00000021190 1418 ntAPPRIS P5 TSL 1 (best) BASIC29.82■■■□□ 2.36
Pds5bQ4VA53 Cd40-202ENSMUST00000073707 1596 ntAPPRIS ALT2 TSL 1 (best) BASIC29.82■■■□□ 2.36
Pds5bQ4VA53 Lrrc4b-201ENSMUST00000058667 2728 ntAPPRIS P1 TSL 1 (best) BASIC29.82■■■□□ 2.36
Pds5bQ4VA53 Mfsd4b3-201ENSMUST00000095749 1787 ntAPPRIS P1 TSL 1 (best) BASIC29.81■■■□□ 2.36
Pds5bQ4VA53 Gm43438-201ENSMUST00000198133 379 ntBASIC29.81■■■□□ 2.36
Pds5bQ4VA53 Icam4-202ENSMUST00000215077 1028 ntAPPRIS ALT2 TSL 1 (best) BASIC29.81■■■□□ 2.36
Pds5bQ4VA53 Aga-201ENSMUST00000033920 1181 ntAPPRIS P3 TSL 1 (best) BASIC29.81■■■□□ 2.36
Pds5bQ4VA53 Hdhd2-202ENSMUST00000097521 1716 ntTSL 1 (best) BASIC29.81■■■□□ 2.36
Pds5bQ4VA53 Mef2b-203ENSMUST00000110143 1312 ntAPPRIS ALT2 TSL 1 (best) BASIC29.81■■■□□ 2.36
Pds5bQ4VA53 Mef2b-204ENSMUST00000110146 1342 ntAPPRIS P3 TSL 1 (best) BASIC29.81■■■□□ 2.36
Pds5bQ4VA53 Wnt10b-204ENSMUST00000226655 1807 ntBASIC29.8■■■□□ 2.36
Pds5bQ4VA53 Sqor-201ENSMUST00000005953 1804 ntAPPRIS P1 TSL 1 (best) BASIC29.8■■■□□ 2.36
Pds5bQ4VA53 Rnf170-208ENSMUST00000153528 1026 ntAPPRIS ALT2 TSL 1 (best) BASIC29.8■■■□□ 2.36
Pds5bQ4VA53 Rhox2a-202ENSMUST00000173650 735 ntTSL 1 (best) BASIC29.8■■■□□ 2.36
Pds5bQ4VA53 Rhox2c-204ENSMUST00000184688 720 ntTSL 5 BASIC29.8■■■□□ 2.36
Pds5bQ4VA53 Gm30191-201ENSMUST00000205501 647 ntAPPRIS P1 TSL 5 BASIC29.8■■■□□ 2.36
Pds5bQ4VA53 Gm8396-201ENSMUST00000057361 823 ntBASIC29.8■■■□□ 2.36
Pds5bQ4VA53 Zc3h15-201ENSMUST00000081591 2111 ntAPPRIS P1 TSL 1 (best) BASIC29.8■■■□□ 2.36
Pds5bQ4VA53 Aurkb-201ENSMUST00000021277 1950 ntAPPRIS P1 TSL 1 (best) BASIC29.8■■■□□ 2.36
Pds5bQ4VA53 Erich2-203ENSMUST00000134607 1659 ntAPPRIS ALT2 TSL 5 BASIC29.8■■■□□ 2.36
Pds5bQ4VA53 Gm12497-201ENSMUST00000138778 237 ntBASIC29.79■■■□□ 2.36
Pds5bQ4VA53 4930445N18Rik-202ENSMUST00000181345 1033 ntTSL 1 (best) BASIC29.79■■■□□ 2.36
Pds5bQ4VA53 1110035H17Rik-202ENSMUST00000205672 1231 ntBASIC29.79■■■□□ 2.36
Pds5bQ4VA53 Timm10b-201ENSMUST00000058333 694 ntAPPRIS P2 TSL 1 (best) BASIC29.79■■■□□ 2.36
Pds5bQ4VA53 Npb-201ENSMUST00000061309 418 ntTSL 3 BASIC29.79■■■□□ 2.36
Pds5bQ4VA53 Npm1-201ENSMUST00000075641 1633 ntAPPRIS P1 TSL 1 (best) BASIC29.79■■■□□ 2.36
Pds5bQ4VA53 Egfl7-216ENSMUST00000174211 1163 ntAPPRIS P4 TSL 1 (best) BASIC29.79■■■□□ 2.36
Pds5bQ4VA53 Entpd4-205ENSMUST00000184314 989 ntTSL 1 (best) BASIC29.79■■■□□ 2.36
Pds5bQ4VA53 Wdyhv1-206ENSMUST00000227142 786 ntBASIC29.79■■■□□ 2.36
Pds5bQ4VA53 Entpd4b-201ENSMUST00000064846 989 ntTSL 1 (best) BASIC29.79■■■□□ 2.36
Pds5bQ4VA53 Crxos-201ENSMUST00000098801 934 ntAPPRIS P1 TSL 1 (best) BASIC29.79■■■□□ 2.36
Pds5bQ4VA53 S1pr4-201ENSMUST00000053646 2386 ntAPPRIS P1 BASIC29.79■■■□□ 2.36
Pds5bQ4VA53 Ccdc17-201ENSMUST00000051869 2003 ntAPPRIS P1 TSL 1 (best) BASIC29.78■■■□□ 2.36
Pds5bQ4VA53 Ptges3-201ENSMUST00000052798 2000 ntAPPRIS P1 TSL 1 (best) BASIC29.78■■■□□ 2.36
Pds5bQ4VA53 Gm6277-202ENSMUST00000224036 2779 ntBASIC29.78■■■□□ 2.36
Pds5bQ4VA53 Sharpin-201ENSMUST00000023211 1734 ntAPPRIS P1 TSL 1 (best) BASIC29.78■■■□□ 2.36
Pds5bQ4VA53 Thoc3-201ENSMUST00000026990 2335 ntAPPRIS P1 TSL 1 (best) BASIC29.78■■■□□ 2.36
Pds5bQ4VA53 Siva1-202ENSMUST00000109755 333 ntTSL 1 (best) BASIC29.78■■■□□ 2.36
Pds5bQ4VA53 Gm14701-201ENSMUST00000117156 348 ntBASIC29.78■■■□□ 2.36
Pds5bQ4VA53 Gm7222-201ENSMUST00000117512 906 ntBASIC29.78■■■□□ 2.36
Pds5bQ4VA53 Nup188-205ENSMUST00000138666 534 ntTSL 1 (best) BASIC29.78■■■□□ 2.36
Pds5bQ4VA53 Gm11025-201ENSMUST00000140773 466 ntBASIC29.78■■■□□ 2.36
Pds5bQ4VA53 H2-Bl-209ENSMUST00000194244 862 ntTSL 1 (best) BASIC29.78■■■□□ 2.36
Pds5bQ4VA53 Gm34030-202ENSMUST00000211434 1126 ntTSL 5 BASIC29.78■■■□□ 2.36
Pds5bQ4VA53 Vsig2-206ENSMUST00000215957 851 ntTSL 1 (best) BASIC29.78■■■□□ 2.36
Pds5bQ4VA53 Syne4-201ENSMUST00000054594 1355 ntAPPRIS P3 TSL 1 (best) BASIC29.78■■■□□ 2.36
Pds5bQ4VA53 Ccl27a-202ENSMUST00000108032 350 ntTSL 1 (best) BASIC29.77■■■□□ 2.36
Pds5bQ4VA53 Gm12480-201ENSMUST00000129576 774 ntTSL 3 BASIC29.77■■■□□ 2.36
Pds5bQ4VA53 Gm16156-201ENSMUST00000141168 713 ntTSL 3 BASIC29.77■■■□□ 2.36
Pds5bQ4VA53 Sfxn5-202ENSMUST00000059034 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC29.77■■■□□ 2.36
Pds5bQ4VA53 Tlcd1-202ENSMUST00000098545 2897 ntTSL 1 (best) BASIC29.77■■■□□ 2.36
Pds5bQ4VA53 Nphp1-202ENSMUST00000110357 2296 ntAPPRIS ALT2 TSL 1 (best) BASIC29.77■■■□□ 2.36
Pds5bQ4VA53 Gm11747-201ENSMUST00000142751 1648 ntTSL 1 (best) BASIC29.77■■■□□ 2.36
Pds5bQ4VA53 1700029H14Rik-203ENSMUST00000134023 1319 ntAPPRIS ALT2 TSL 1 (best) BASIC29.76■■■□□ 2.36
Pds5bQ4VA53 Lfng-201ENSMUST00000031555 2305 ntAPPRIS P1 TSL 1 (best) BASIC29.76■■■□□ 2.36
Pds5bQ4VA53 Notumos-201ENSMUST00000151998 2659 ntBASIC29.76■■■□□ 2.36
Pds5bQ4VA53 Elmo2-204ENSMUST00000103088 3052 ntAPPRIS ALT2 TSL 5 BASIC29.76■■■□□ 2.35
Pds5bQ4VA53 Rabepk-202ENSMUST00000113086 1106 ntTSL 5 BASIC29.76■■■□□ 2.35
Pds5bQ4VA53 Hmgb1-208ENSMUST00000139443 923 ntTSL 2 BASIC29.76■■■□□ 2.35
Pds5bQ4VA53 Rilpl1-201ENSMUST00000062153 2249 ntAPPRIS P1 TSL 1 (best) BASIC29.76■■■□□ 2.35
Pds5bQ4VA53 Dok3-201ENSMUST00000047877 1546 ntAPPRIS P1 TSL 1 (best) BASIC29.76■■■□□ 2.35
Pds5bQ4VA53 Man2c1os-201ENSMUST00000125333 1910 ntTSL 1 (best) BASIC29.76■■■□□ 2.35
Pds5bQ4VA53 Paip2-201ENSMUST00000041314 1475 ntAPPRIS P1 TSL 1 (best) BASIC29.75■■■□□ 2.35
Pds5bQ4VA53 Gm12689-201ENSMUST00000094955 1359 ntAPPRIS P1 BASIC29.75■■■□□ 2.35
Pds5bQ4VA53 Ccdc174-201ENSMUST00000037783 1752 ntAPPRIS P1 TSL 1 (best) BASIC29.75■■■□□ 2.35
Pds5bQ4VA53 Arpp19-210ENSMUST00000170308 429 ntAPPRIS P1 TSL 2 BASIC29.75■■■□□ 2.35
Pds5bQ4VA53 Retsat-204ENSMUST00000176168 1203 ntTSL 5 BASIC29.75■■■□□ 2.35
Pds5bQ4VA53 Psmb4-201ENSMUST00000005923 1183 ntAPPRIS P1 TSL 1 (best) BASIC29.75■■■□□ 2.35
Pds5bQ4VA53 1700086L19Rik-201ENSMUST00000095617 706 ntBASIC29.75■■■□□ 2.35
Pds5bQ4VA53 Fam168b-201ENSMUST00000047534 5030 ntAPPRIS P1 TSL 1 (best) BASIC29.75■■■□□ 2.35
Pds5bQ4VA53 Il10rb-201ENSMUST00000023691 1850 ntAPPRIS P1 TSL 1 (best) BASIC29.75■■■□□ 2.35
Pds5bQ4VA53 Crybb1-202ENSMUST00000112375 793 ntAPPRIS P1 TSL 3 BASIC29.74■■■□□ 2.35
Pds5bQ4VA53 Ntpcr-205ENSMUST00000143504 520 ntTSL 5 BASIC29.74■■■□□ 2.35
Pds5bQ4VA53 Nckipsd-206ENSMUST00000195323 467 ntTSL 3 BASIC29.74■■■□□ 2.35
Pds5bQ4VA53 Smdt1-201ENSMUST00000023086 705 ntAPPRIS P1 TSL 1 (best) BASIC29.74■■■□□ 2.35
Retrieved 100 of 76,532 protein–RNA pairs in 21.1 ms