Protein–RNA interactions for Protein: Q4FK66

Prpf38a, Pre-mRNA-splicing factor 38A, mousemouse

Known RBP Predictions only

Length 312 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf38aQ4FK66 2810408A11Rik-204ENSMUST00000108621 1455 ntAPPRIS ALT2 TSL 5 BASIC19.96■□□□□ 0.79
Prpf38aQ4FK66 Stard6-201ENSMUST00000114959 1496 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Prpf38aQ4FK66 Wtap-205ENSMUST00000160781 2442 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
Prpf38aQ4FK66 Il17rb-202ENSMUST00000122205 2094 ntAPPRIS ALT2 TSL 5 BASIC19.96■□□□□ 0.79
Prpf38aQ4FK66 Acbd4-201ENSMUST00000024492 2075 ntAPPRIS P1 TSL 5 BASIC19.96■□□□□ 0.79
Prpf38aQ4FK66 Tesk1-201ENSMUST00000060864 3947 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Prpf38aQ4FK66 Kmt2b-201ENSMUST00000006470 8469 ntAPPRIS ALT2 TSL 5 BASIC19.95■□□□□ 0.78
Prpf38aQ4FK66 Camta1-204ENSMUST00000105670 4961 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
Prpf38aQ4FK66 Tdrd12-201ENSMUST00000032701 1620 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
Prpf38aQ4FK66 Gm14859-201ENSMUST00000117752 357 ntBASIC19.95■□□□□ 0.78
Prpf38aQ4FK66 Gm44973-201ENSMUST00000207050 1003 ntAPPRIS P1 TSL 3 BASIC19.95■□□□□ 0.78
Prpf38aQ4FK66 Ak6-201ENSMUST00000022135 1298 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Prpf38aQ4FK66 Shc3-203ENSMUST00000223543 1241 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
Prpf38aQ4FK66 Asap2-202ENSMUST00000064595 5678 ntAPPRIS P4 TSL 5 BASIC19.95■□□□□ 0.78
Prpf38aQ4FK66 Dmap1-201ENSMUST00000102687 1566 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Prpf38aQ4FK66 Ddhd2-206ENSMUST00000211688 2265 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
Prpf38aQ4FK66 Gas1-201ENSMUST00000065086 2961 ntAPPRIS ALT2 BASIC19.95■□□□□ 0.78
Prpf38aQ4FK66 Ube2q2-201ENSMUST00000059555 3456 ntAPPRIS P3 TSL 1 (best) BASIC19.95■□□□□ 0.78
Prpf38aQ4FK66 Fam57b-201ENSMUST00000079423 2328 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Prpf38aQ4FK66 Snrpd2-201ENSMUST00000049294 1420 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Prpf38aQ4FK66 Tsnax-202ENSMUST00000212603 2169 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
Prpf38aQ4FK66 9330111N05Rik-202ENSMUST00000181043 2449 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
Prpf38aQ4FK66 Zdhhc6-209ENSMUST00000225495 1711 ntBASIC19.94■□□□□ 0.78
Prpf38aQ4FK66 Schip1-201ENSMUST00000029346 2201 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
Prpf38aQ4FK66 Crocc-211ENSMUST00000168157 6244 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
Prpf38aQ4FK66 Crocc-201ENSMUST00000040222 6248 ntTSL 5 BASIC19.94■□□□□ 0.78
Prpf38aQ4FK66 Fam129c-208ENSMUST00000143662 2267 ntAPPRIS P1 TSL 5 BASIC19.94■□□□□ 0.78
Prpf38aQ4FK66 Farsa-202ENSMUST00000109754 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Prpf38aQ4FK66 Bud23-202ENSMUST00000085984 1516 ntAPPRIS P2 TSL 1 (best) BASIC19.94■□□□□ 0.78
Prpf38aQ4FK66 Fndc11-202ENSMUST00000108835 1154 ntAPPRIS P1 TSL 2 BASIC19.94■□□□□ 0.78
Prpf38aQ4FK66 Gm4316-202ENSMUST00000212490 1115 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
Prpf38aQ4FK66 1700022H01Rik-201ENSMUST00000219142 387 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
Prpf38aQ4FK66 Ythdf3-201ENSMUST00000108345 5102 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Prpf38aQ4FK66 Adsl-204ENSMUST00000164806 1595 ntTSL 5 BASIC19.94■□□□□ 0.78
Prpf38aQ4FK66 Ric3-202ENSMUST00000120876 1633 ntAPPRIS ALT1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Prpf38aQ4FK66 4833445I07Rik-201ENSMUST00000193193 1642 ntBASIC19.94■□□□□ 0.78
Prpf38aQ4FK66 Sort1-201ENSMUST00000102632 6796 ntAPPRIS P3 TSL 1 (best) BASIC19.94■□□□□ 0.78
Prpf38aQ4FK66 Gm26592-201ENSMUST00000180870 1730 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
Prpf38aQ4FK66 Mtmr1-201ENSMUST00000015358 4634 ntAPPRIS P2 TSL 1 (best) BASIC19.93■□□□□ 0.78
Prpf38aQ4FK66 Tm7sf2-201ENSMUST00000025713 1471 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Prpf38aQ4FK66 Chd5-205ENSMUST00000164662 9375 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
Prpf38aQ4FK66 2310022A10Rik-201ENSMUST00000067386 2701 ntAPPRIS P2 TSL 1 (best) BASIC19.93■□□□□ 0.78
Prpf38aQ4FK66 Dap-201ENSMUST00000044524 1555 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Prpf38aQ4FK66 Acvr2b-205ENSMUST00000215746 3175 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Prpf38aQ4FK66 Gm12781-201ENSMUST00000146269 395 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
Prpf38aQ4FK66 Gm37722-201ENSMUST00000193757 208 ntBASIC19.93■□□□□ 0.78
Prpf38aQ4FK66 Gm17808-201ENSMUST00000200859 894 ntBASIC19.93■□□□□ 0.78
Prpf38aQ4FK66 Cdh4-201ENSMUST00000000314 6388 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Prpf38aQ4FK66 Mrps6-201ENSMUST00000047429 846 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Prpf38aQ4FK66 Ptpra-201ENSMUST00000028769 3227 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Prpf38aQ4FK66 Arfip2-202ENSMUST00000084782 2254 ntAPPRIS P2 TSL 5 BASIC19.93■□□□□ 0.78
Prpf38aQ4FK66 Spg21-202ENSMUST00000213957 1302 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
Prpf38aQ4FK66 Ttc19-201ENSMUST00000050646 3410 ntAPPRIS P3 TSL 1 (best) BASIC19.93■□□□□ 0.78
Prpf38aQ4FK66 Mafg-201ENSMUST00000058162 4923 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Prpf38aQ4FK66 Zcchc6-207ENSMUST00000225576 2499 ntBASIC19.93■□□□□ 0.78
Prpf38aQ4FK66 Matn4-204ENSMUST00000109359 2179 ntTSL 5 BASIC19.93■□□□□ 0.78
Prpf38aQ4FK66 Gpaa1-210ENSMUST00000172281 1809 ntTSL 5 BASIC19.92■□□□□ 0.78
Prpf38aQ4FK66 Ctnnbip1-201ENSMUST00000030839 2674 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Prpf38aQ4FK66 Htr5b-201ENSMUST00000055884 1935 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Prpf38aQ4FK66 2010016I18Rik-204ENSMUST00000190356 1562 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
Prpf38aQ4FK66 Arid3b-202ENSMUST00000098686 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
Prpf38aQ4FK66 Ddx19a-201ENSMUST00000040416 2547 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Prpf38aQ4FK66 Gm7284-201ENSMUST00000131667 944 ntBASIC19.92■□□□□ 0.78
Prpf38aQ4FK66 Has3-202ENSMUST00000175987 1154 ntTSL 5 BASIC19.92■□□□□ 0.78
Prpf38aQ4FK66 Gm27704-201ENSMUST00000185094 107 ntBASIC19.92■□□□□ 0.78
Prpf38aQ4FK66 Flt3l-206ENSMUST00000210197 834 ntAPPRIS ALT2 TSL 5 BASIC19.92■□□□□ 0.78
Prpf38aQ4FK66 Snrnp35-201ENSMUST00000031349 1115 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Prpf38aQ4FK66 C1qbp-201ENSMUST00000078528 1175 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Prpf38aQ4FK66 Gm11532-201ENSMUST00000128111 5272 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
Prpf38aQ4FK66 Ddx39b-203ENSMUST00000173731 2848 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Prpf38aQ4FK66 Dlg3-204ENSMUST00000113736 4940 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
Prpf38aQ4FK66 Gm21974-201ENSMUST00000126662 2037 ntAPPRIS P1 TSL 5 BASIC19.92■□□□□ 0.78
Prpf38aQ4FK66 Cenpw-201ENSMUST00000099985 1532 ntAPPRIS P2 TSL 1 (best) BASIC19.92■□□□□ 0.78
Prpf38aQ4FK66 Trim67-201ENSMUST00000041106 5694 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Prpf38aQ4FK66 Sox12-201ENSMUST00000063332 4169 ntAPPRIS P1 TSL 2 BASIC19.91■□□□□ 0.78
Prpf38aQ4FK66 Ythdc1-203ENSMUST00000120498 3269 ntAPPRIS ALT2 TSL 5 BASIC19.91■□□□□ 0.78
Prpf38aQ4FK66 Vps53-203ENSMUST00000108419 2209 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
Prpf38aQ4FK66 Pea15a-202ENSMUST00000111247 2435 ntTSL 3 BASIC19.91■□□□□ 0.78
Prpf38aQ4FK66 Sars2-201ENSMUST00000094632 1868 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Prpf38aQ4FK66 Urah-202ENSMUST00000106050 719 ntAPPRIS ALT2 TSL 2 BASIC19.91■□□□□ 0.78
Prpf38aQ4FK66 Gm11860-201ENSMUST00000122346 1010 ntBASIC19.91■□□□□ 0.78
Prpf38aQ4FK66 AC122351.1-201ENSMUST00000220467 126 ntBASIC19.91■□□□□ 0.78
Prpf38aQ4FK66 Mrpl36-203ENSMUST00000222030 680 ntAPPRIS P1 TSL 3 BASIC19.91■□□□□ 0.78
Prpf38aQ4FK66 Fnbp1-205ENSMUST00000113552 1910 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
Prpf38aQ4FK66 Mfsd10-202ENSMUST00000114329 1906 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Prpf38aQ4FK66 Sdc3-201ENSMUST00000070478 4973 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Prpf38aQ4FK66 Gpd1l-201ENSMUST00000084853 1436 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
Prpf38aQ4FK66 Platr31-201ENSMUST00000180653 1466 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
Prpf38aQ4FK66 Sptbn4-207ENSMUST00000172269 8737 ntAPPRIS ALT2 TSL 2 BASIC19.91■□□□□ 0.78
Prpf38aQ4FK66 Atp2c1-204ENSMUST00000112558 5642 ntAPPRIS P3 TSL 1 (best) BASIC19.91■□□□□ 0.78
Prpf38aQ4FK66 Ubtf-204ENSMUST00000107117 3258 ntAPPRIS ALT2 TSL 5 BASIC19.91■□□□□ 0.78
Prpf38aQ4FK66 5330438I03Rik-201ENSMUST00000168347 2845 ntBASIC19.9■□□□□ 0.78
Prpf38aQ4FK66 Foxf1-201ENSMUST00000181504 2415 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Prpf38aQ4FK66 Acaa1a-203ENSMUST00000175743 1219 ntTSL 5 BASIC19.9■□□□□ 0.78
Prpf38aQ4FK66 Acaa1a-207ENSMUST00000176397 996 ntTSL 5 BASIC19.9■□□□□ 0.78
Prpf38aQ4FK66 Med29-201ENSMUST00000003536 1281 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Prpf38aQ4FK66 Tctex1d4-201ENSMUST00000062206 990 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Prpf38aQ4FK66 B4galt5-201ENSMUST00000109221 4210 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Prpf38aQ4FK66 Ttyh3-202ENSMUST00000197452 4576 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Prpf38aQ4FK66 Irak2-203ENSMUST00000089023 1734 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Retrieved 100 of 76,532 protein–RNA pairs in 25.2 ms