Protein–RNA interactions for Protein: P97445

Cacna1a, Voltage-dependent P/Q-type calcium channel subunit alpha-1A, mousemouse

Predictions only

Length 2,368 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cacna1aP97445 Haus4-201ENSMUST00000022784 1587 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Cacna1aP97445 Yipf2-203ENSMUST00000180365 2014 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Cacna1aP97445 Bend4-204ENSMUST00000201972 8268 ntAPPRIS P1 TSL 5 BASIC15.74■□□□□ 0.11
Cacna1aP97445 Cacng4-201ENSMUST00000021066 3500 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Cacna1aP97445 Ephb4-203ENSMUST00000111055 4296 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
Cacna1aP97445 Prmt6-201ENSMUST00000106567 2450 ntAPPRIS P1 BASIC15.74■□□□□ 0.11
Cacna1aP97445 Nfkbib-201ENSMUST00000032815 2061 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Cacna1aP97445 St7l-201ENSMUST00000059271 5728 ntAPPRIS P3 TSL 1 (best) BASIC15.74■□□□□ 0.11
Cacna1aP97445 Gm19721-201ENSMUST00000195284 1764 ntBASIC15.74■□□□□ 0.11
Cacna1aP97445 Gmnn-202ENSMUST00000110382 963 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Cacna1aP97445 Rpp40-202ENSMUST00000174230 1053 ntTSL 5 BASIC15.74■□□□□ 0.11
Cacna1aP97445 Gm27217-201ENSMUST00000183438 882 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Cacna1aP97445 4930458A03Rik-201ENSMUST00000198197 961 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Cacna1aP97445 AC125350.1-201ENSMUST00000225115 903 ntBASIC15.74■□□□□ 0.11
Cacna1aP97445 Lce1a1-201ENSMUST00000074142 705 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Cacna1aP97445 Six3-203ENSMUST00000176081 3680 ntAPPRIS P2 TSL 1 (best) BASIC15.74■□□□□ 0.11
Cacna1aP97445 Hmgxb3-201ENSMUST00000091884 5101 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Cacna1aP97445 Nrxn2-205ENSMUST00000113462 6667 ntAPPRIS P4 TSL 1 (best) BASIC15.74■□□□□ 0.11
Cacna1aP97445 9330154J02Rik-202ENSMUST00000185960 2557 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Cacna1aP97445 Polr3d-201ENSMUST00000000793 2016 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Cacna1aP97445 Sema3c-201ENSMUST00000030568 5491 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Cacna1aP97445 Irf3-213ENSMUST00000209066 1712 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Cacna1aP97445 Cnpy1-201ENSMUST00000117098 2661 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Cacna1aP97445 Rbms1-209ENSMUST00000164147 2543 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Cacna1aP97445 Baiap2-202ENSMUST00000075180 3518 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
Cacna1aP97445 Thoc3-201ENSMUST00000026990 2335 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Cacna1aP97445 Gm14029-201ENSMUST00000151051 1348 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Cacna1aP97445 Btf3-204ENSMUST00000134542 780 ntAPPRIS P1 TSL 2 BASIC15.73■□□□□ 0.11
Cacna1aP97445 Scpep1os-201ENSMUST00000139592 811 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Cacna1aP97445 Klf13-202ENSMUST00000183817 599 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Cacna1aP97445 Hmgb1-rs17-201ENSMUST00000210634 972 ntBASIC15.73■□□□□ 0.11
Cacna1aP97445 Vti1a-206ENSMUST00000225529 1244 ntBASIC15.73■□□□□ 0.11
Cacna1aP97445 Hist1h2ai-201ENSMUST00000070124 393 ntAPPRIS P1 BASIC15.73■□□□□ 0.11
Cacna1aP97445 Hist1h2an-201ENSMUST00000091751 393 ntAPPRIS P1 BASIC15.73■□□□□ 0.11
Cacna1aP97445 Mthfd2-201ENSMUST00000005810 2085 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Cacna1aP97445 Ulk1-201ENSMUST00000031490 5213 ntAPPRIS P3 TSL 1 (best) BASIC15.73■□□□□ 0.11
Cacna1aP97445 Apbb1-219ENSMUST00000191601 2690 ntAPPRIS P4 TSL 5 BASIC15.73■□□□□ 0.11
Cacna1aP97445 Galnt11-201ENSMUST00000045737 2552 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Cacna1aP97445 Whrn-206ENSMUST00000102867 4013 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
Cacna1aP97445 Nectin1-201ENSMUST00000034510 5653 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Cacna1aP97445 Wnt10b-203ENSMUST00000226610 2217 ntAPPRIS P1 BASIC15.73■□□□□ 0.11
Cacna1aP97445 Coq5-201ENSMUST00000040421 2037 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Cacna1aP97445 Idnk-204ENSMUST00000226010 1898 ntBASIC15.73■□□□□ 0.11
Cacna1aP97445 Gpr162-204ENSMUST00000204667 2855 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Cacna1aP97445 Gm38119-201ENSMUST00000192027 755 ntAPPRIS P1 TSL 5 BASIC15.73■□□□□ 0.11
Cacna1aP97445 Insig2-201ENSMUST00000003818 2697 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Cacna1aP97445 Plekhg3-201ENSMUST00000075249 5138 ntAPPRIS P2 TSL 1 (best) BASIC15.73■□□□□ 0.11
Cacna1aP97445 Tbcel-201ENSMUST00000066148 5000 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Cacna1aP97445 Gpr137-201ENSMUST00000025909 1717 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Cacna1aP97445 Gm6736-201ENSMUST00000166583 948 ntBASIC15.72■□□□□ 0.11
Cacna1aP97445 1700021F07Rik-201ENSMUST00000029023 646 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Cacna1aP97445 Prm2-201ENSMUST00000037996 621 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Cacna1aP97445 Mrpl34-201ENSMUST00000048914 607 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Cacna1aP97445 Fbxo36-201ENSMUST00000097672 901 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Cacna1aP97445 Bcl9l-206ENSMUST00000220303 5760 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
Cacna1aP97445 3110043O21Rik-203ENSMUST00000108127 3193 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Cacna1aP97445 Tha1-201ENSMUST00000033230 1770 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Cacna1aP97445 Pla2g10-201ENSMUST00000023364 1423 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Cacna1aP97445 5730507C01Rik-202ENSMUST00000177778 2542 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
Cacna1aP97445 Nudt3-201ENSMUST00000025050 2193 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Cacna1aP97445 Rps27l-203ENSMUST00000127896 575 ntTSL 5 BASIC15.72■□□□□ 0.11
Cacna1aP97445 E2f7-205ENSMUST00000173634 827 ntTSL 2 BASIC15.72■□□□□ 0.11
Cacna1aP97445 Acaa1a-203ENSMUST00000175743 1219 ntTSL 5 BASIC15.72■□□□□ 0.11
Cacna1aP97445 Acaa1a-207ENSMUST00000176397 996 ntTSL 5 BASIC15.72■□□□□ 0.11
Cacna1aP97445 Ppp1r27-201ENSMUST00000026121 771 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Cacna1aP97445 Rln3-201ENSMUST00000061923 634 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Cacna1aP97445 Tram1-201ENSMUST00000027068 2938 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Cacna1aP97445 Rfesd-203ENSMUST00000179078 1436 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Cacna1aP97445 Pmpcb-201ENSMUST00000030882 1615 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Cacna1aP97445 Ptpdc1-201ENSMUST00000035824 4402 ntAPPRIS P2 TSL 1 (best) BASIC15.71■□□□□ 0.11
Cacna1aP97445 Cenpw-201ENSMUST00000099985 1532 ntAPPRIS P2 TSL 1 (best) BASIC15.71■□□□□ 0.11
Cacna1aP97445 Dip2c-203ENSMUST00000174552 8023 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Cacna1aP97445 Gm15677-201ENSMUST00000152302 766 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Cacna1aP97445 Edf1-201ENSMUST00000015236 722 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Cacna1aP97445 Zfp747-202ENSMUST00000205832 618 ntTSL 3 BASIC15.71■□□□□ 0.11
Cacna1aP97445 Gm9449-201ENSMUST00000207265 1011 ntBASIC15.71■□□□□ 0.11
Cacna1aP97445 Rpl13a-204ENSMUST00000209711 495 ntTSL 3 BASIC15.71■□□□□ 0.11
Cacna1aP97445 1110038F14Rik-201ENSMUST00000071792 1010 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Cacna1aP97445 Fbxl5-201ENSMUST00000047857 2858 ntAPPRIS P2 TSL 1 (best) BASIC15.71■□□□□ 0.11
Cacna1aP97445 Gm26885-201ENSMUST00000181920 1688 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Cacna1aP97445 Iqcd-202ENSMUST00000094391 1673 ntAPPRIS P2 TSL 1 (best) BASIC15.71■□□□□ 0.11
Cacna1aP97445 Nlgn2-202ENSMUST00000108634 5568 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Cacna1aP97445 Ddhd2-206ENSMUST00000211688 2265 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Cacna1aP97445 Cspg5-202ENSMUST00000196060 3790 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Cacna1aP97445 Trnt1-202ENSMUST00000113247 1934 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Cacna1aP97445 Mmd-202ENSMUST00000107887 1654 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Cacna1aP97445 Tm7sf2-201ENSMUST00000025713 1471 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Cacna1aP97445 0610009B22Rik-202ENSMUST00000109098 892 ntAPPRIS P1 TSL 3 BASIC15.71■□□□□ 0.11
Cacna1aP97445 Gm26871-202ENSMUST00000180774 695 ntTSL 2 BASIC15.71■□□□□ 0.11
Cacna1aP97445 Usf2-201ENSMUST00000058860 2419 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Cacna1aP97445 Nptxr-201ENSMUST00000023057 5004 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.1
Cacna1aP97445 Prmt8-201ENSMUST00000032500 2724 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
Cacna1aP97445 Shisa7-203ENSMUST00000119433 3481 ntAPPRIS P2 TSL 1 (best) BASIC15.71■□□□□ 0.1
Cacna1aP97445 Fxyd6-203ENSMUST00000217381 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC15.71■□□□□ 0.1
Cacna1aP97445 Rpl3l-202ENSMUST00000170239 1375 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.1
Cacna1aP97445 AC131586.3-201ENSMUST00000228355 1367 ntBASIC15.71■□□□□ 0.1
Cacna1aP97445 4930426D05Rik-202ENSMUST00000139804 1650 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Cacna1aP97445 Gm2213-201ENSMUST00000197485 688 ntBASIC15.7■□□□□ 0.1
Cacna1aP97445 Olfr1232-201ENSMUST00000099785 936 ntAPPRIS P1 BASIC15.7■□□□□ 0.1
Cacna1aP97445 Gm10461-201ENSMUST00000202073 4786 ntBASIC15.7■□□□□ 0.1
Retrieved 100 of 76,532 protein–RNA pairs in 24.4 ms