Protein–RNA interactions for Protein: P63154

Crnkl1, Crooked neck-like protein 1, mousemouse

Known RBP Predictions only

Length 690 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Crnkl1P63154 Kcnab3-201ENSMUST00000018614 2538 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Crnkl1P63154 Rftn1-201ENSMUST00000044503 4029 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Crnkl1P63154 Prss56-201ENSMUST00000044533 2180 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Crnkl1P63154 Acot5-202ENSMUST00000072505 1401 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Crnkl1P63154 Dpys-201ENSMUST00000022915 2466 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Crnkl1P63154 Dmgdh-201ENSMUST00000048001 2992 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Crnkl1P63154 Rai1-201ENSMUST00000064190 7348 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Crnkl1P63154 Mipep-201ENSMUST00000063562 3015 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Crnkl1P63154 Trim28-201ENSMUST00000005705 3245 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Crnkl1P63154 Rimbp3-201ENSMUST00000169803 5787 ntAPPRIS P1 BASIC16.96■□□□□ 0.31
Crnkl1P63154 Gm11713-201ENSMUST00000139941 523 ntTSL 3 BASIC16.96■□□□□ 0.31
Crnkl1P63154 A830035A12Rik-201ENSMUST00000147445 861 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Crnkl1P63154 Rian-206ENSMUST00000182119 329 ntTSL 3 BASIC16.96■□□□□ 0.31
Crnkl1P63154 Gm39115-201ENSMUST00000211350 699 ntAPPRIS P1 BASIC16.96■□□□□ 0.31
Crnkl1P63154 Elof1-204ENSMUST00000214394 567 ntAPPRIS P1 TSL 2 BASIC16.96■□□□□ 0.31
Crnkl1P63154 Wasl-202ENSMUST00000041737 1298 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Crnkl1P63154 4833418N02Rik-202ENSMUST00000146560 1495 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Crnkl1P63154 Dnajc3-201ENSMUST00000022734 5141 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Crnkl1P63154 Sec61a1-201ENSMUST00000032168 3172 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Crnkl1P63154 Wnt2b-201ENSMUST00000029429 3318 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Crnkl1P63154 Rfx7-202ENSMUST00000163401 7880 ntAPPRIS P1 TSL 2 BASIC16.96■□□□□ 0.3
Crnkl1P63154 Lrrtm1-203ENSMUST00000161677 2518 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
Crnkl1P63154 Ino80e-202ENSMUST00000106342 1840 ntTSL 3 BASIC16.96■□□□□ 0.3
Crnkl1P63154 Tfdp2-209ENSMUST00000188750 1713 ntAPPRIS ALT2 TSL 5 BASIC16.96■□□□□ 0.3
Crnkl1P63154 9930012K11Rik-205ENSMUST00000153871 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
Crnkl1P63154 Ppfibp1-201ENSMUST00000016631 4851 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
Crnkl1P63154 Gm9780-201ENSMUST00000184272 350 ntTSL 2 BASIC16.95■□□□□ 0.3
Crnkl1P63154 Foxk1-202ENSMUST00000198422 687 ntTSL 3 BASIC16.95■□□□□ 0.3
Crnkl1P63154 Prpsap1-201ENSMUST00000106391 1841 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Crnkl1P63154 Uts2r-201ENSMUST00000039044 1703 ntAPPRIS P1 BASIC16.95■□□□□ 0.3
Crnkl1P63154 Znfx1-201ENSMUST00000048988 7218 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Crnkl1P63154 Scn1b-203ENSMUST00000211945 1501 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
Crnkl1P63154 Fam171a1-203ENSMUST00000091505 3449 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Crnkl1P63154 Anapc5-201ENSMUST00000086216 2760 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
Crnkl1P63154 Smad3-201ENSMUST00000034973 5090 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Crnkl1P63154 Psen2-202ENSMUST00000111104 1475 ntAPPRIS ALT1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Crnkl1P63154 Elac2-203ENSMUST00000108697 2612 ntAPPRIS ALT2 TSL 5 BASIC16.94■□□□□ 0.3
Crnkl1P63154 Adra2c-201ENSMUST00000049545 3445 ntAPPRIS P1 BASIC16.94■□□□□ 0.3
Crnkl1P63154 Snrk-201ENSMUST00000118886 4811 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Crnkl1P63154 Slc13a3-202ENSMUST00000109279 3131 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Crnkl1P63154 S100a6-201ENSMUST00000001051 731 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Crnkl1P63154 Gm44732-201ENSMUST00000208055 635 ntTSL 3 BASIC16.94■□□□□ 0.3
Crnkl1P63154 Gm11841-201ENSMUST00000117060 1963 ntBASIC16.94■□□□□ 0.3
Crnkl1P63154 Hps6-201ENSMUST00000099393 2696 ntAPPRIS P1 BASIC16.94■□□□□ 0.3
Crnkl1P63154 Tor1b-201ENSMUST00000028199 3039 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Crnkl1P63154 Fgfr1-214ENSMUST00000178276 4741 ntTSL 5 BASIC16.94■□□□□ 0.3
Crnkl1P63154 Gpat3-203ENSMUST00000112887 3059 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Crnkl1P63154 Foxc2-201ENSMUST00000054691 2725 ntAPPRIS P1 BASIC16.94■□□□□ 0.3
Crnkl1P63154 Trmt2a-203ENSMUST00000115640 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Crnkl1P63154 Acp5-204ENSMUST00000213815 1419 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
Crnkl1P63154 Acp5-206ENSMUST00000217643 1447 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
Crnkl1P63154 Slc23a4-205ENSMUST00000201355 2003 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
Crnkl1P63154 Zfyve19-201ENSMUST00000090174 2008 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Crnkl1P63154 Serbp1-211ENSMUST00000204293 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Crnkl1P63154 Gabrb3-201ENSMUST00000039697 5579 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Crnkl1P63154 Slc39a7-201ENSMUST00000025186 2244 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Crnkl1P63154 Mef2d-203ENSMUST00000107559 1791 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Crnkl1P63154 Cul1-201ENSMUST00000031697 3161 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Crnkl1P63154 Map6-207ENSMUST00000208924 2906 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Crnkl1P63154 Tsc22d4-205ENSMUST00000110985 790 ntAPPRIS ALT2 TSL 2 BASIC16.93■□□□□ 0.3
Crnkl1P63154 Pts-208ENSMUST00000215416 439 ntTSL 2 BASIC16.93■□□□□ 0.3
Crnkl1P63154 Cbl-204ENSMUST00000205968 2809 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Crnkl1P63154 Rabep1-201ENSMUST00000076270 5408 ntAPPRIS P2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Crnkl1P63154 Spdef-205ENSMUST00000167489 1708 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
Crnkl1P63154 Polr3e-203ENSMUST00000207481 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Crnkl1P63154 Stk32c-202ENSMUST00000165870 1883 ntTSL 5 BASIC16.93■□□□□ 0.3
Crnkl1P63154 Nox4-202ENSMUST00000068829 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Crnkl1P63154 Zkscan3-204ENSMUST00000117721 5788 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Crnkl1P63154 Ofd1-201ENSMUST00000049501 4453 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Crnkl1P63154 Sox4-201ENSMUST00000067230 4795 ntAPPRIS P1 BASIC16.92■□□□□ 0.3
Crnkl1P63154 Dnajb5-201ENSMUST00000037872 3291 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
Crnkl1P63154 Gm10655-201ENSMUST00000098658 1397 ntBASIC16.92■□□□□ 0.3
Crnkl1P63154 Mms22l-202ENSMUST00000108222 4478 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
Crnkl1P63154 Naa50-204ENSMUST00000161326 4487 ntAPPRIS ALT1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Crnkl1P63154 Bend5-201ENSMUST00000030274 1826 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Crnkl1P63154 Pcbp1-201ENSMUST00000053015 1830 ntAPPRIS P1 BASIC16.92■□□□□ 0.3
Crnkl1P63154 Zfx-201ENSMUST00000088102 7002 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Crnkl1P63154 Hist1h4a-201ENSMUST00000102964 539 ntAPPRIS P1 BASIC16.92■□□□□ 0.3
Crnkl1P63154 Gm6420-201ENSMUST00000193885 723 ntBASIC16.92■□□□□ 0.3
Crnkl1P63154 C230062I16Rik-202ENSMUST00000207746 1022 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Crnkl1P63154 Psenen-201ENSMUST00000043898 708 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Crnkl1P63154 Tdg-ps-201ENSMUST00000051363 2968 ntBASIC16.92■□□□□ 0.3
Crnkl1P63154 Ptprn-201ENSMUST00000027404 3554 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Crnkl1P63154 Zbtb45-201ENSMUST00000051390 2171 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Crnkl1P63154 Sapcd2-202ENSMUST00000100323 1761 ntAPPRIS ALT2 TSL 2 BASIC16.92■□□□□ 0.3
Crnkl1P63154 Adap2-201ENSMUST00000021050 1785 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Crnkl1P63154 Krt90-201ENSMUST00000023714 2534 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Crnkl1P63154 Bloc1s3-201ENSMUST00000077408 3188 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Crnkl1P63154 Tbc1d19-201ENSMUST00000037337 2273 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Crnkl1P63154 Ift74-201ENSMUST00000030311 2139 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
Crnkl1P63154 Pced1a-202ENSMUST00000110277 1689 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Crnkl1P63154 Lhx2-203ENSMUST00000143783 1696 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Crnkl1P63154 Pkp2-202ENSMUST00000161342 2931 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Crnkl1P63154 Sphk1-206ENSMUST00000106388 1891 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
Crnkl1P63154 Krt19-201ENSMUST00000007317 1576 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Crnkl1P63154 1700066B19Rik-201ENSMUST00000097617 2504 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Crnkl1P63154 Gm30003-201ENSMUST00000200700 1433 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Crnkl1P63154 Rgl1-202ENSMUST00000111857 3037 ntTSL 5 BASIC16.91■□□□□ 0.3
Crnkl1P63154 Gm8773-201ENSMUST00000101627 1268 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Crnkl1P63154 Nfe2l3-203ENSMUST00000160133 1125 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Retrieved 100 of 76,532 protein–RNA pairs in 32.9 ms