Protein–RNA interactions for Protein: P62892

Rpl39, 60S ribosomal protein L39, mousemouse

Predictions only

Length 51 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpl39P62892 Mrpl57-201ENSMUST00000022538 2877 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Rpl39P62892 Gpr150-201ENSMUST00000056130 2146 ntAPPRIS P1 BASIC12.25□□□□□ -0.45
Rpl39P62892 Slc9a6-202ENSMUST00000114784 4449 ntTSL 5 BASIC12.25□□□□□ -0.45
Rpl39P62892 Mmp11-201ENSMUST00000000924 2288 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Rpl39P62892 Sptbn4-203ENSMUST00000108363 4724 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Rpl39P62892 Sptbn4-204ENSMUST00000108364 4740 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Rpl39P62892 Nat9-201ENSMUST00000103038 1143 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Rpl39P62892 Tgfbr3l-201ENSMUST00000110993 1075 ntAPPRIS P1 TSL 5 BASIC12.25□□□□□ -0.45
Rpl39P62892 Ikzf5-203ENSMUST00000128432 714 ntTSL 3 BASIC12.25□□□□□ -0.45
Rpl39P62892 Tusc3-202ENSMUST00000169034 1262 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Rpl39P62892 Gamt-201ENSMUST00000020359 979 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Rpl39P62892 Jsrp1-201ENSMUST00000020435 955 ntAPPRIS ALT2 TSL 2 BASIC12.25□□□□□ -0.45
Rpl39P62892 Hist1h2ag-201ENSMUST00000091741 485 ntAPPRIS P1 BASIC12.25□□□□□ -0.45
Rpl39P62892 Shc1-202ENSMUST00000094378 2617 ntAPPRIS ALT1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Rpl39P62892 Mrpl12-201ENSMUST00000043627 1316 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Rpl39P62892 Pacs1-201ENSMUST00000025786 4339 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Rpl39P62892 Pon1-201ENSMUST00000002663 1513 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Rpl39P62892 Atp6v1g2-201ENSMUST00000068261 1528 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Rpl39P62892 Med18-201ENSMUST00000102567 1675 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Rpl39P62892 Fam171a1-203ENSMUST00000091505 3449 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Rpl39P62892 Opn4-202ENSMUST00000168444 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Rpl39P62892 Gm37820-201ENSMUST00000194021 2147 ntBASIC12.25□□□□□ -0.45
Rpl39P62892 Zfx-204ENSMUST00000113927 6933 ntAPPRIS P1 TSL 5 BASIC12.25□□□□□ -0.45
Rpl39P62892 Prr14-201ENSMUST00000033095 2402 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Rpl39P62892 Pde8b-214ENSMUST00000172104 2493 ntAPPRIS ALT2 TSL 5 BASIC12.25□□□□□ -0.45
Rpl39P62892 9530068E07Rik-201ENSMUST00000036952 2467 ntAPPRIS P2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Rpl39P62892 1810041L15Rik-203ENSMUST00000189248 5296 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Rpl39P62892 Atp6v0a1-203ENSMUST00000103110 2716 ntTSL 5 BASIC12.24□□□□□ -0.45
Rpl39P62892 Asph-210ENSMUST00000108337 2836 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Rpl39P62892 Arntl-201ENSMUST00000047321 2908 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Rpl39P62892 Urgcp-201ENSMUST00000053427 5527 ntAPPRIS ALT2 TSL 5 BASIC12.24□□□□□ -0.45
Rpl39P62892 Gnal-201ENSMUST00000025402 5616 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Rpl39P62892 Eif5a-210ENSMUST00000108613 1343 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Rpl39P62892 Arpc2-202ENSMUST00000113819 1313 ntTSL 5 BASIC12.24□□□□□ -0.45
Rpl39P62892 Zfp943-202ENSMUST00000153985 1598 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Rpl39P62892 Zpr1-206ENSMUST00000156440 2984 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Rpl39P62892 Cnppd1-208ENSMUST00000190679 2062 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Rpl39P62892 Chst10-206ENSMUST00000194361 2996 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Rpl39P62892 Glt28d2-201ENSMUST00000033643 2732 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Rpl39P62892 Nrip1-201ENSMUST00000054178 4529 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Rpl39P62892 1700012B09Rik-201ENSMUST00000060330 688 ntAPPRIS P2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Rpl39P62892 Shank3-202ENSMUST00000066545 4702 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Rpl39P62892 Ppm1e-201ENSMUST00000055438 6344 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Rpl39P62892 Mapk8ip3-208ENSMUST00000121787 5431 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Rpl39P62892 6430548M08Rik-201ENSMUST00000034281 5564 ntAPPRIS P3 TSL 1 (best) BASIC12.24□□□□□ -0.45
Rpl39P62892 Zfp326-201ENSMUST00000031227 2667 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Rpl39P62892 Lrrtm1-203ENSMUST00000161677 2518 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Rpl39P62892 Mbp-201ENSMUST00000047865 2492 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Rpl39P62892 Rb1-201ENSMUST00000022701 4656 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Rpl39P62892 Fam57b-201ENSMUST00000079423 2328 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Rpl39P62892 Slmap-212ENSMUST00000139075 4508 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Rpl39P62892 Diaph2-201ENSMUST00000037854 3742 ntAPPRIS P2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Rpl39P62892 Ptprn-201ENSMUST00000027404 3554 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Rpl39P62892 Ube2j2-201ENSMUST00000024056 3483 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Rpl39P62892 Rasgrp1-207ENSMUST00000178884 5104 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Rpl39P62892 Elf2-201ENSMUST00000062009 3353 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Rpl39P62892 Fam126a-202ENSMUST00000101513 1679 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Rpl39P62892 Ppan-201ENSMUST00000004203 1670 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Rpl39P62892 Cep152-201ENSMUST00000089776 5768 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Rpl39P62892 Iscu-202ENSMUST00000112311 1395 ntTSL 2 BASIC12.23□□□□□ -0.45
Rpl39P62892 Stard6-203ENSMUST00000168249 1167 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Rpl39P62892 2300009A05Rik-201ENSMUST00000168665 595 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Rpl39P62892 AC122379.1-201ENSMUST00000220658 355 ntTSL 3 BASIC12.23□□□□□ -0.45
Rpl39P62892 AC104834.1-201ENSMUST00000222611 1056 ntAPPRIS P1 BASIC12.23□□□□□ -0.45
Rpl39P62892 Aste1-202ENSMUST00000123807 2349 ntAPPRIS ALT2 TSL 2 BASIC12.23□□□□□ -0.45
Rpl39P62892 Plekha8-202ENSMUST00000119706 6739 ntAPPRIS P1 TSL 2 BASIC12.23□□□□□ -0.45
Rpl39P62892 Flt1-203ENSMUST00000110529 6292 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Rpl39P62892 Kif21a-204ENSMUST00000109287 6124 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Rpl39P62892 Kif21a-205ENSMUST00000109288 6142 ntAPPRIS P3 TSL 1 (best) BASIC12.23□□□□□ -0.45
Rpl39P62892 Psen2-205ENSMUST00000111108 1997 ntAPPRIS P2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Rpl39P62892 Nipsnap1-201ENSMUST00000038570 1926 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Rpl39P62892 Inpp5e-202ENSMUST00000114090 2790 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Rpl39P62892 Rab33b-201ENSMUST00000054387 3492 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Rpl39P62892 Hey2-201ENSMUST00000019924 2550 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Rpl39P62892 Endov-203ENSMUST00000106245 5126 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Rpl39P62892 Ephb4-201ENSMUST00000061244 4340 ntAPPRIS P3 TSL 1 (best) BASIC12.22□□□□□ -0.45
Rpl39P62892 Dcps-202ENSMUST00000119847 1445 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Rpl39P62892 Gm26674-201ENSMUST00000180770 1446 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Rpl39P62892 Rfx5-201ENSMUST00000029772 4189 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Rpl39P62892 Impdh1-202ENSMUST00000159124 2600 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Rpl39P62892 Krt9-201ENSMUST00000059707 2580 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Rpl39P62892 Pde8b-202ENSMUST00000067082 2598 ntAPPRIS ALT2 TSL 5 BASIC12.22□□□□□ -0.45
Rpl39P62892 Snx3-202ENSMUST00000105499 1057 ntTSL 5 BASIC12.22□□□□□ -0.45
Rpl39P62892 Neurl1b-203ENSMUST00000183077 1084 ntTSL 5 BASIC12.22□□□□□ -0.45
Rpl39P62892 Vkorc1l1-202ENSMUST00000073945 650 ntTSL 2 BASIC12.22□□□□□ -0.45
Rpl39P62892 Dtd2-202ENSMUST00000085404 1012 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Rpl39P62892 Ubr2-202ENSMUST00000113337 7633 ntAPPRIS P3 TSL 1 (best) BASIC12.22□□□□□ -0.45
Rpl39P62892 Pigs-201ENSMUST00000048073 2501 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Rpl39P62892 Aida-206ENSMUST00000193625 1810 ntTSL 3 BASIC12.22□□□□□ -0.45
Rpl39P62892 Msl1-201ENSMUST00000037915 4593 ntAPPRIS P2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Rpl39P62892 Trim31-201ENSMUST00000078438 2257 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Rpl39P62892 March8-201ENSMUST00000079012 4450 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Rpl39P62892 Zfp281-201ENSMUST00000047734 4933 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Rpl39P62892 Tedc2-201ENSMUST00000024930 2166 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Rpl39P62892 Ltbp1-201ENSMUST00000001927 6671 ntTSL 5 BASIC12.22□□□□□ -0.45
Rpl39P62892 Zbtb2-201ENSMUST00000100077 3086 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Rpl39P62892 2210016F16Rik-201ENSMUST00000022032 3051 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Rpl39P62892 Rps6ka1-201ENSMUST00000003741 3085 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Rpl39P62892 Rwdd2b-201ENSMUST00000039101 2009 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Rpl39P62892 Carmil2-201ENSMUST00000062574 2526 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 33.4 ms