Protein–RNA interactions for Protein: P62322

Lsm5, U6 snRNA-associated Sm-like protein LSm5, mousemouse

Predictions only

Length 91 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm5P62322 Hps6-201ENSMUST00000099393 2696 ntAPPRIS P1 BASIC14.34□□□□□ -0.11
Lsm5P62322 Nipal3-201ENSMUST00000102549 5153 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
Lsm5P62322 Cstf2-201ENSMUST00000033609 4502 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Lsm5P62322 Chst10-206ENSMUST00000194361 2996 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Lsm5P62322 Cdk5-201ENSMUST00000030814 2059 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Lsm5P62322 Rnf128-201ENSMUST00000113026 2750 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Lsm5P62322 Slc12a5-201ENSMUST00000099092 6028 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Lsm5P62322 Pmpcb-201ENSMUST00000030882 1615 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Lsm5P62322 Nefh-201ENSMUST00000093369 3994 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.11
Lsm5P62322 Gm27029-202ENSMUST00000107259 1855 ntAPPRIS P5 TSL 5 BASIC14.33□□□□□ -0.11
Lsm5P62322 Gm5577-201ENSMUST00000134600 1434 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
Lsm5P62322 Npdc1-201ENSMUST00000055921 1412 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.11
Lsm5P62322 Gm26885-201ENSMUST00000181920 1688 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
Lsm5P62322 Agap1-204ENSMUST00000190096 4078 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.11
Lsm5P62322 Tchh-201ENSMUST00000064257 5823 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
Lsm5P62322 Clic1-201ENSMUST00000007257 1466 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Lsm5P62322 Tex261-201ENSMUST00000014892 2984 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Lsm5P62322 Rab33b-201ENSMUST00000054387 3492 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Lsm5P62322 Cux1-212ENSMUST00000176778 5520 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
Lsm5P62322 Polr3e-203ENSMUST00000207481 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Lsm5P62322 Mastl-201ENSMUST00000028119 5590 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Lsm5P62322 A530016L24Rik-202ENSMUST00000223266 1547 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Lsm5P62322 Eif6-201ENSMUST00000029142 1500 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Lsm5P62322 Ttl-201ENSMUST00000035812 4567 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Lsm5P62322 Mpc1-208ENSMUST00000155364 958 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.12
Lsm5P62322 Uncx-202ENSMUST00000174792 1196 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Lsm5P62322 Ccdc85b-201ENSMUST00000179549 609 ntAPPRIS P1 BASIC14.33□□□□□ -0.12
Lsm5P62322 9530036O11Rik-201ENSMUST00000180878 876 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Lsm5P62322 Gm26833-201ENSMUST00000180899 440 ntBASIC14.33□□□□□ -0.12
Lsm5P62322 Msantd1-203ENSMUST00000202205 744 ntTSL 2 BASIC14.33□□□□□ -0.12
Lsm5P62322 AC114678.1-201ENSMUST00000219640 622 ntTSL 3 BASIC14.33□□□□□ -0.12
Lsm5P62322 Rbfox2-204ENSMUST00000171751 3558 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Lsm5P62322 Fam171a1-203ENSMUST00000091505 3449 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Lsm5P62322 Arntl-201ENSMUST00000047321 2908 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Lsm5P62322 Col2a1-201ENSMUST00000023123 5104 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Lsm5P62322 2510009E07Rik-201ENSMUST00000053336 5164 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Lsm5P62322 Dnajc1-209ENSMUST00000166495 5497 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Lsm5P62322 Cnksr1-201ENSMUST00000030645 2468 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Lsm5P62322 Tssk2-201ENSMUST00000055374 1387 ntAPPRIS P1 BASIC14.33□□□□□ -0.12
Lsm5P62322 Crb2-201ENSMUST00000050372 6372 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
Lsm5P62322 F12-201ENSMUST00000021948 1960 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Lsm5P62322 Grtp1-207ENSMUST00000211128 1416 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Lsm5P62322 Hey2-201ENSMUST00000019924 2550 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Lsm5P62322 Plekha4-202ENSMUST00000209517 2577 ntAPPRIS P2 TSL 5 BASIC14.32□□□□□ -0.12
Lsm5P62322 Arhgef10l-203ENSMUST00000097820 4382 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Lsm5P62322 Cenpa-205ENSMUST00000144742 1466 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Lsm5P62322 Gm26821-201ENSMUST00000181954 2652 ntTSL 5 BASIC14.32□□□□□ -0.12
Lsm5P62322 Mios-201ENSMUST00000040017 3710 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Lsm5P62322 Efr3b-201ENSMUST00000111178 6547 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Lsm5P62322 Rtkn-201ENSMUST00000065512 2191 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Lsm5P62322 Stard7-202ENSMUST00000110375 3116 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Lsm5P62322 Gm16835-201ENSMUST00000140488 2809 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Lsm5P62322 Igfbp7-202ENSMUST00000163898 1200 ntAPPRIS P4 TSL 5 BASIC14.32□□□□□ -0.12
Lsm5P62322 4933406I18Rik-202ENSMUST00000163996 904 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Lsm5P62322 Gm20548-204ENSMUST00000174528 791 ntTSL 3 BASIC14.32□□□□□ -0.12
Lsm5P62322 Hes3-202ENSMUST00000218045 962 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
Lsm5P62322 Ndufa5-201ENSMUST00000023851 875 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Lsm5P62322 Bptf-201ENSMUST00000057892 11488 ntAPPRIS P2 TSL 5 BASIC14.32□□□□□ -0.12
Lsm5P62322 Slc43a1-202ENSMUST00000111624 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Lsm5P62322 Gm11841-201ENSMUST00000117060 1963 ntBASIC14.32□□□□□ -0.12
Lsm5P62322 Mon1b-201ENSMUST00000035777 4998 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Lsm5P62322 Slc5a10-203ENSMUST00000148584 2049 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Lsm5P62322 Tmprss5-201ENSMUST00000070390 2047 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Lsm5P62322 Polr3d-201ENSMUST00000000793 2016 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Lsm5P62322 Tmem81-201ENSMUST00000058167 1742 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Lsm5P62322 Cmip-202ENSMUST00000166750 2408 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
Lsm5P62322 Ptprt-202ENSMUST00000109442 7719 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
Lsm5P62322 Ahctf1-201ENSMUST00000027768 8506 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Lsm5P62322 F830208F22Rik-202ENSMUST00000143732 2891 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Lsm5P62322 Fads3-201ENSMUST00000115995 3269 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Lsm5P62322 Nek1-202ENSMUST00000120689 5478 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Lsm5P62322 Krt9-201ENSMUST00000059707 2580 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Lsm5P62322 Pdk1-201ENSMUST00000006669 5185 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Lsm5P62322 Igdcc4-202ENSMUST00000077696 6361 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
Lsm5P62322 Rgl1-202ENSMUST00000111857 3037 ntTSL 5 BASIC14.31□□□□□ -0.12
Lsm5P62322 Igsf8-201ENSMUST00000039506 2278 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Lsm5P62322 Aste1-202ENSMUST00000123807 2349 ntAPPRIS ALT2 TSL 2 BASIC14.31□□□□□ -0.12
Lsm5P62322 Pomp-201ENSMUST00000031654 1579 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Lsm5P62322 Nfkbid-201ENSMUST00000046177 2039 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Lsm5P62322 Stx6-201ENSMUST00000027743 4589 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Lsm5P62322 Ppm1h-206ENSMUST00000161487 2931 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Lsm5P62322 Svbp-201ENSMUST00000030395 733 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Lsm5P62322 Rasl10a-201ENSMUST00000037218 1110 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Lsm5P62322 Taf10-203ENSMUST00000141116 4281 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Lsm5P62322 Arntl-203ENSMUST00000210074 2554 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Lsm5P62322 Wisp2-201ENSMUST00000029188 1719 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Lsm5P62322 Ube2j2-201ENSMUST00000024056 3483 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Lsm5P62322 Arrb2-205ENSMUST00000108568 1777 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Lsm5P62322 Shroom3-203ENSMUST00000113055 6765 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Lsm5P62322 P2rx4-201ENSMUST00000031429 2702 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Lsm5P62322 Xpo1-202ENSMUST00000102869 6004 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Lsm5P62322 Fubp3-202ENSMUST00000113482 3268 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Lsm5P62322 H2-Q7-201ENSMUST00000071951 1406 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Lsm5P62322 H2-Q7-203ENSMUST00000078205 1419 ntTSL 5 BASIC14.31□□□□□ -0.12
Lsm5P62322 Cadps2-202ENSMUST00000069074 3935 ntTSL 5 BASIC14.31□□□□□ -0.12
Lsm5P62322 Zfp281-202ENSMUST00000112046 4937 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Lsm5P62322 Dok4-201ENSMUST00000046461 2590 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Lsm5P62322 Hap1-201ENSMUST00000103124 2120 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
Lsm5P62322 CT010478.1-201ENSMUST00000220747 2787 ntBASIC14.3□□□□□ -0.12
Lsm5P62322 Rae1-201ENSMUST00000029013 1742 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 51.4 ms