Protein–RNA interactions for Protein: P61079

Ube2d3, Ubiquitin-conjugating enzyme E2 D3, mousemouse

Predictions only

Length 147 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ube2d3P61079 Rtl8b-201ENSMUST00000088778 1232 ntAPPRIS P1 BASIC12.26□□□□□ -0.45
Ube2d3P61079 Kcmf1-201ENSMUST00000068697 3251 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Ube2d3P61079 Bicc1-203ENSMUST00000143791 5431 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Ube2d3P61079 Anapc7-201ENSMUST00000031422 2751 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Ube2d3P61079 AI314180-201ENSMUST00000055822 1478 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Ube2d3P61079 Zfp277-202ENSMUST00000069692 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Ube2d3P61079 Bmp2k-201ENSMUST00000035635 7387 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Ube2d3P61079 Neu1-201ENSMUST00000007253 2474 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Ube2d3P61079 Kri1-201ENSMUST00000038671 2598 ntAPPRIS P2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Ube2d3P61079 Plekha7-210ENSMUST00000182834 5257 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Ube2d3P61079 Cdc25a-201ENSMUST00000094324 3632 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Ube2d3P61079 Slc32a1-201ENSMUST00000045738 2797 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Ube2d3P61079 Gm28372-201ENSMUST00000188900 1876 ntAPPRIS P1 TSL 5 BASIC12.25□□□□□ -0.45
Ube2d3P61079 Pde5a-204ENSMUST00000200389 7603 ntAPPRIS ALT2 TSL 5 BASIC12.25□□□□□ -0.45
Ube2d3P61079 F830208F22Rik-202ENSMUST00000143732 2891 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Ube2d3P61079 Casp9-201ENSMUST00000030747 3897 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Ube2d3P61079 Bcar1-201ENSMUST00000166232 3142 ntAPPRIS P3 TSL 1 (best) BASIC12.25□□□□□ -0.45
Ube2d3P61079 Stk35-202ENSMUST00000166282 5445 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Ube2d3P61079 Gas2-201ENSMUST00000051912 2181 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Ube2d3P61079 Mmp28-201ENSMUST00000021020 2311 ntAPPRIS P4 TSL 1 (best) BASIC12.25□□□□□ -0.45
Ube2d3P61079 Npas3-201ENSMUST00000101432 5879 ntAPPRIS P2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Ube2d3P61079 Zmym3-206ENSMUST00000120107 5882 ntAPPRIS ALT2 TSL 5 BASIC12.25□□□□□ -0.45
Ube2d3P61079 Eif4h-201ENSMUST00000036125 2367 ntAPPRIS ALT1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Ube2d3P61079 Acss3-201ENSMUST00000044668 2494 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Ube2d3P61079 Gm15648-201ENSMUST00000149681 778 ntTSL 5 BASIC12.25□□□□□ -0.45
Ube2d3P61079 Mir6349-201ENSMUST00000184059 97 ntBASIC12.25□□□□□ -0.45
Ube2d3P61079 Gm2559-201ENSMUST00000201323 363 ntBASIC12.25□□□□□ -0.45
Ube2d3P61079 Espn-206ENSMUST00000103196 1323 ntTSL 5 BASIC12.25□□□□□ -0.45
Ube2d3P61079 Mettl21a-201ENSMUST00000053469 2666 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Ube2d3P61079 Foxc2-201ENSMUST00000054691 2725 ntAPPRIS P1 BASIC12.25□□□□□ -0.45
Ube2d3P61079 Paqr3-201ENSMUST00000069453 1375 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Ube2d3P61079 Ttc13-202ENSMUST00000117624 3096 ntTSL 5 BASIC12.25□□□□□ -0.45
Ube2d3P61079 Klc3-202ENSMUST00000108457 1632 ntAPPRIS P1 TSL 5 BASIC12.25□□□□□ -0.45
Ube2d3P61079 Stk32c-202ENSMUST00000165870 1883 ntTSL 5 BASIC12.25□□□□□ -0.45
Ube2d3P61079 Gm26755-201ENSMUST00000180703 2657 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Ube2d3P61079 Auh-202ENSMUST00000110031 3235 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Ube2d3P61079 Lrrc47-205ENSMUST00000169622 3468 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Ube2d3P61079 Cask-203ENSMUST00000115436 8260 ntAPPRIS P1 TSL 2 BASIC12.24□□□□□ -0.45
Ube2d3P61079 Shank1-203ENSMUST00000107938 9826 ntAPPRIS P2 TSL 5 BASIC12.24□□□□□ -0.45
Ube2d3P61079 Cacna2d2-203ENSMUST00000164988 5542 ntAPPRIS ALT2 TSL 5 BASIC12.24□□□□□ -0.45
Ube2d3P61079 Gm8773-201ENSMUST00000101627 1268 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Ube2d3P61079 Dnajc19-201ENSMUST00000011029 2499 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Ube2d3P61079 Gm13401-201ENSMUST00000117074 291 ntBASIC12.24□□□□□ -0.45
Ube2d3P61079 Gm11643-201ENSMUST00000119578 864 ntBASIC12.24□□□□□ -0.45
Ube2d3P61079 Synpo-205ENSMUST00000130044 4970 ntAPPRIS P3 TSL 2 BASIC12.24□□□□□ -0.45
Ube2d3P61079 Zscan29-203ENSMUST00000146243 2894 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Ube2d3P61079 Tpsg1-204ENSMUST00000160920 867 ntTSL 3 BASIC12.24□□□□□ -0.45
Ube2d3P61079 Pde8b-208ENSMUST00000162292 4235 ntAPPRIS P2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Ube2d3P61079 1700007L15Rik-201ENSMUST00000180923 737 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Ube2d3P61079 Ngb-201ENSMUST00000021420 1616 ntAPPRIS P3 TSL 1 (best) BASIC12.24□□□□□ -0.45
Ube2d3P61079 Rhof-201ENSMUST00000031401 2208 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Ube2d3P61079 Ruvbl1-201ENSMUST00000032165 1675 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Ube2d3P61079 Mtag2-201ENSMUST00000058665 714 ntBASIC12.24□□□□□ -0.45
Ube2d3P61079 Gm9970-201ENSMUST00000068997 558 ntAPPRIS P1 BASIC12.24□□□□□ -0.45
Ube2d3P61079 Lat2-202ENSMUST00000077636 1717 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Ube2d3P61079 Slc35g2-201ENSMUST00000093792 1590 ntAPPRIS P1 TSL 2 BASIC12.24□□□□□ -0.45
Ube2d3P61079 Wscd2-201ENSMUST00000094452 4302 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Ube2d3P61079 Adgrl1-201ENSMUST00000045393 5643 ntAPPRIS P1 TSL 5 BASIC12.24□□□□□ -0.45
Ube2d3P61079 Ccdc88a-201ENSMUST00000040182 9376 ntAPPRIS P1 TSL 5 BASIC12.24□□□□□ -0.45
Ube2d3P61079 Gm10435-202ENSMUST00000162526 2878 ntTSL 5 BASIC12.24□□□□□ -0.45
Ube2d3P61079 Katnbl1-201ENSMUST00000028552 2886 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Ube2d3P61079 Lrch3-211ENSMUST00000170899 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Ube2d3P61079 Plekhf1-201ENSMUST00000098513 5263 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Ube2d3P61079 Clvs2-203ENSMUST00000160299 2610 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Ube2d3P61079 Nhs-201ENSMUST00000081569 4881 ntAPPRIS P3 TSL 1 (best) BASIC12.23□□□□□ -0.45
Ube2d3P61079 Cmip-202ENSMUST00000166750 2408 ntAPPRIS P1 TSL 5 BASIC12.23□□□□□ -0.45
Ube2d3P61079 Mmp11-201ENSMUST00000000924 2288 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Ube2d3P61079 Trmt2a-202ENSMUST00000100099 2235 ntAPPRIS P5 TSL 1 (best) BASIC12.23□□□□□ -0.45
Ube2d3P61079 Apba3-201ENSMUST00000057798 2106 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Ube2d3P61079 Nodal-201ENSMUST00000049339 2095 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Ube2d3P61079 Lrrc43-202ENSMUST00000121444 2016 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Ube2d3P61079 Txnl4b-201ENSMUST00000034159 1890 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Ube2d3P61079 Gm14026-201ENSMUST00000120625 1789 ntBASIC12.23□□□□□ -0.45
Ube2d3P61079 Kctd1-202ENSMUST00000168989 3456 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Ube2d3P61079 Sept4-205ENSMUST00000107962 1678 ntAPPRIS ALT1 TSL 5 BASIC12.23□□□□□ -0.45
Ube2d3P61079 Dlgap4-205ENSMUST00000109567 4840 ntAPPRIS ALT2 TSL 5 BASIC12.23□□□□□ -0.45
Ube2d3P61079 Hmces-201ENSMUST00000032141 1464 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Ube2d3P61079 Aifm2-201ENSMUST00000067857 1442 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Ube2d3P61079 Tex264-203ENSMUST00000169068 1364 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Ube2d3P61079 Zdhhc24-201ENSMUST00000006632 2558 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Ube2d3P61079 Selenos-201ENSMUST00000101801 1191 ntAPPRIS P2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Ube2d3P61079 Nudt8-203ENSMUST00000122924 1082 ntTSL 2 BASIC12.23□□□□□ -0.45
Ube2d3P61079 Dap-205ENSMUST00000186547 535 ntTSL 3 BASIC12.23□□□□□ -0.45
Ube2d3P61079 Gm3807-201ENSMUST00000193520 1168 ntBASIC12.23□□□□□ -0.45
Ube2d3P61079 Gm19391-201ENSMUST00000196653 999 ntTSL 3 BASIC12.23□□□□□ -0.45
Ube2d3P61079 Gm10138-203ENSMUST00000206952 366 ntBASIC12.23□□□□□ -0.45
Ube2d3P61079 Gm30085-201ENSMUST00000209694 594 ntTSL 3 BASIC12.23□□□□□ -0.45
Ube2d3P61079 AC175538.2-202ENSMUST00000224997 1057 ntAPPRIS P1 BASIC12.23□□□□□ -0.45
Ube2d3P61079 Tmem233-201ENSMUST00000111997 2477 ntAPPRIS P1 TSL 2 BASIC12.23□□□□□ -0.45
Ube2d3P61079 Mpig6b-201ENSMUST00000097337 2252 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Ube2d3P61079 Fmnl3-202ENSMUST00000088233 4423 ntAPPRIS P3 TSL 1 (best) BASIC12.23□□□□□ -0.45
Ube2d3P61079 Plcl1-201ENSMUST00000042986 6580 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Ube2d3P61079 Taf5-201ENSMUST00000026027 3258 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Ube2d3P61079 Snx27-201ENSMUST00000029783 6261 ntAPPRIS ALT1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Ube2d3P61079 5031425F14Rik-201ENSMUST00000127920 2098 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Ube2d3P61079 Nr1h2-203ENSMUST00000107911 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Ube2d3P61079 Mars-201ENSMUST00000037290 2939 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Ube2d3P61079 AC125311.2-201ENSMUST00000227477 1940 ntBASIC12.23□□□□□ -0.45
Ube2d3P61079 Plppr4-201ENSMUST00000061071 5696 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Ube2d3P61079 Gch1-201ENSMUST00000089959 2775 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 20.5 ms