Protein–RNA interactions for Protein: P60229

Eif3e, Eukaryotic translation initiation factor 3 subunit E, mousemouse

Known RBP Predictions only

Length 445 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Eif3eP60229 Slc35e3-201ENSMUST00000079041 3489 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Eif3eP60229 Zfp865-203ENSMUST00000085427 2751 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Eif3eP60229 Dzip3-202ENSMUST00000121869 5820 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
Eif3eP60229 Tfdp2-206ENSMUST00000185644 2646 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
Eif3eP60229 Trp73-203ENSMUST00000105643 1916 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
Eif3eP60229 Cnksr1-201ENSMUST00000030645 2468 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Eif3eP60229 Rala-201ENSMUST00000009003 2688 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Eif3eP60229 Zkscan14-201ENSMUST00000031632 1967 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Eif3eP60229 Sec61a1-201ENSMUST00000032168 3172 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Eif3eP60229 Gm5643-201ENSMUST00000117081 966 ntBASIC17.66■□□□□ 0.42
Eif3eP60229 Nudt22-203ENSMUST00000180765 1073 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
Eif3eP60229 Nfkbib-201ENSMUST00000032815 2061 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Eif3eP60229 Unc13b-201ENSMUST00000079978 6354 ntAPPRIS P2 TSL 5 BASIC17.66■□□□□ 0.42
Eif3eP60229 Alcam-201ENSMUST00000023312 6036 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Eif3eP60229 Npas3-201ENSMUST00000101432 5879 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Eif3eP60229 Cct6b-201ENSMUST00000021040 1787 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Eif3eP60229 Synpo-205ENSMUST00000130044 4970 ntAPPRIS P3 TSL 2 BASIC17.66■□□□□ 0.42
Eif3eP60229 Slc7a5-201ENSMUST00000045557 3517 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Eif3eP60229 BC029722-201ENSMUST00000124586 1615 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Eif3eP60229 Zfand5-201ENSMUST00000025659 2834 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Eif3eP60229 Spdef-205ENSMUST00000167489 1708 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
Eif3eP60229 Prss16-204ENSMUST00000150547 1159 ntTSL 3 BASIC17.65■□□□□ 0.42
Eif3eP60229 Gm45894-201ENSMUST00000211940 651 ntTSL 2 BASIC17.65■□□□□ 0.42
Eif3eP60229 Vgll2-201ENSMUST00000058347 966 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Eif3eP60229 Gm10638-201ENSMUST00000098532 905 ntAPPRIS P1 BASIC17.65■□□□□ 0.42
Eif3eP60229 Car9-201ENSMUST00000030183 2023 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Eif3eP60229 Sh3gl2-203ENSMUST00000107188 2286 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Eif3eP60229 Tfap2a-209ENSMUST00000225180 1828 ntBASIC17.65■□□□□ 0.42
Eif3eP60229 Cdv3-207ENSMUST00000190226 3107 ntTSL 5 BASIC17.65■□□□□ 0.42
Eif3eP60229 Ctla2a-201ENSMUST00000021880 1373 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Eif3eP60229 Pitx3-201ENSMUST00000026259 1380 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Eif3eP60229 Vrk2-201ENSMUST00000078362 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Eif3eP60229 Itpkb-201ENSMUST00000070181 6235 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Eif3eP60229 Nr1h2-201ENSMUST00000073488 1999 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
Eif3eP60229 Xpr1-202ENSMUST00000111774 2753 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Eif3eP60229 Scamp3-201ENSMUST00000029684 1489 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
Eif3eP60229 Hoxd4-201ENSMUST00000047904 2560 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
Eif3eP60229 Prrt4-201ENSMUST00000159200 3411 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Eif3eP60229 Zbtb22-201ENSMUST00000053429 2611 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Eif3eP60229 Lhx6-203ENSMUST00000112963 3481 ntTSL 2 BASIC17.64■□□□□ 0.41
Eif3eP60229 Tmc6-202ENSMUST00000103025 1279 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Eif3eP60229 E030044B06Rik-201ENSMUST00000181195 1266 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Eif3eP60229 Gm9694-201ENSMUST00000193347 1189 ntBASIC17.64■□□□□ 0.41
Eif3eP60229 A930018P22Rik-201ENSMUST00000040374 822 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Eif3eP60229 Gm11273-201ENSMUST00000044043 390 ntAPPRIS P1 BASIC17.64■□□□□ 0.41
Eif3eP60229 Ptges2-201ENSMUST00000028162 4978 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Eif3eP60229 Bean1-204ENSMUST00000171018 3386 ntAPPRIS P4 TSL 1 (best) BASIC17.64■□□□□ 0.41
Eif3eP60229 Dscr3-201ENSMUST00000023615 2547 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Eif3eP60229 Camsap2-203ENSMUST00000192314 4916 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Eif3eP60229 4921536K21Rik-201ENSMUST00000020712 2590 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Eif3eP60229 Fam109a-203ENSMUST00000198271 2335 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Eif3eP60229 Ppm1j-201ENSMUST00000002298 1721 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Eif3eP60229 Gm43548-201ENSMUST00000197139 2353 ntBASIC17.64■□□□□ 0.41
Eif3eP60229 Zbtb24-202ENSMUST00000213797 2734 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Eif3eP60229 Zfp668-203ENSMUST00000106262 3169 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Eif3eP60229 Tedc2-201ENSMUST00000024930 2166 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Eif3eP60229 Col13a1-204ENSMUST00000105453 2935 ntTSL 2 BASIC17.63■□□□□ 0.41
Eif3eP60229 Vopp1-201ENSMUST00000114297 2919 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Eif3eP60229 Eda-203ENSMUST00000113776 5105 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Eif3eP60229 Rpl36al-202ENSMUST00000110619 1276 ntAPPRIS P1 BASIC17.63■□□□□ 0.41
Eif3eP60229 Gm24841-201ENSMUST00000158676 357 ntBASIC17.63■□□□□ 0.41
Eif3eP60229 Gm29257-201ENSMUST00000186115 639 ntBASIC17.63■□□□□ 0.41
Eif3eP60229 Gm44899-201ENSMUST00000207451 391 ntTSL 3 BASIC17.63■□□□□ 0.41
Eif3eP60229 Rpl18-202ENSMUST00000209287 1027 ntTSL 3 BASIC17.63■□□□□ 0.41
Eif3eP60229 Fbxo7-203ENSMUST00000120344 1655 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Eif3eP60229 Dnajc19-201ENSMUST00000011029 2499 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Eif3eP60229 Chka-202ENSMUST00000072055 2549 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
Eif3eP60229 Dnlz-201ENSMUST00000028295 2916 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Eif3eP60229 Sncb-201ENSMUST00000036825 1351 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Eif3eP60229 Slc47a1-201ENSMUST00000010267 2639 ntAPPRIS P1 TSL 2 BASIC17.63■□□□□ 0.41
Eif3eP60229 Vps53-203ENSMUST00000108419 2209 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Eif3eP60229 Cdc42ep3-201ENSMUST00000068958 1967 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Eif3eP60229 Zranb2-203ENSMUST00000106058 2924 ntAPPRIS P2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Eif3eP60229 Siglecf-202ENSMUST00000121494 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Eif3eP60229 Cacna1c-216ENSMUST00000188522 7338 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
Eif3eP60229 Adgrb2-204ENSMUST00000106015 4982 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Eif3eP60229 Iqsec2-203ENSMUST00000112605 6017 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
Eif3eP60229 Tmem163-203ENSMUST00000160616 2657 ntAPPRIS P1 TSL 2 BASIC17.62■□□□□ 0.41
Eif3eP60229 Zrsr2-202ENSMUST00000112289 2735 ntAPPRIS P1 TSL 2 BASIC17.62■□□□□ 0.41
Eif3eP60229 Rbm39-202ENSMUST00000109584 667 ntTSL 5 BASIC17.62■□□□□ 0.41
Eif3eP60229 Gm15378-201ENSMUST00000121894 207 ntBASIC17.62■□□□□ 0.41
Eif3eP60229 4930467K11Rik-201ENSMUST00000180831 723 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Eif3eP60229 CT025689.6-201ENSMUST00000224991 1104 ntBASIC17.62■□□□□ 0.41
Eif3eP60229 Mrpl10-202ENSMUST00000054252 744 ntTSL 5 BASIC17.62■□□□□ 0.41
Eif3eP60229 Irgc1-204ENSMUST00000205776 1835 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Eif3eP60229 Adrb3-202ENSMUST00000117565 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Eif3eP60229 Acads-201ENSMUST00000031524 1870 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Eif3eP60229 AC124581.1-201ENSMUST00000225416 1399 ntBASIC17.62■□□□□ 0.41
Eif3eP60229 Dock3-201ENSMUST00000044532 9063 ntAPPRIS P1 TSL 2 BASIC17.62■□□□□ 0.41
Eif3eP60229 Elk4-202ENSMUST00000086556 4433 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Eif3eP60229 Tle3-211ENSMUST00000161689 2836 ntTSL 2 BASIC17.62■□□□□ 0.41
Eif3eP60229 CT010444.2-201ENSMUST00000217877 1629 ntBASIC17.61■□□□□ 0.41
Eif3eP60229 Rbm12b1-202ENSMUST00000069128 3069 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Eif3eP60229 Atg4c-201ENSMUST00000030279 3178 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Eif3eP60229 Gm11620-201ENSMUST00000118770 1845 ntBASIC17.61■□□□□ 0.41
Eif3eP60229 Yipf2-202ENSMUST00000078572 1894 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Eif3eP60229 Pld2-203ENSMUST00000108557 3655 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Eif3eP60229 Gm13816-201ENSMUST00000152230 715 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Eif3eP60229 A930001A20Rik-201ENSMUST00000182586 1366 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Eif3eP60229 Ccdc124-201ENSMUST00000007865 1356 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Retrieved 100 of 76,532 protein–RNA pairs in 23.7 ms