Protein–RNA interactions for Protein: P58771

Tpm1, Tropomyosin alpha-1 chain, mousemouse

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tpm1P58771 Faim-201ENSMUST00000035038 1019 ntAPPRIS P3 TSL 1 (best) BASIC19.12■□□□□ 0.65
Tpm1P58771 Bri3-201ENSMUST00000056578 955 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Tpm1P58771 Clcn3-203ENSMUST00000093490 5518 ntAPPRIS ALT1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Tpm1P58771 Mapk7-201ENSMUST00000079080 3019 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Tpm1P58771 Osbpl1a-208ENSMUST00000121888 2674 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Tpm1P58771 Sphk1-202ENSMUST00000063446 2527 ntAPPRIS ALT2 TSL 2 BASIC19.12■□□□□ 0.65
Tpm1P58771 Chn1-203ENSMUST00000112024 4050 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Tpm1P58771 Chn1-210ENSMUST00000180045 4050 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Tpm1P58771 Ankra2-203ENSMUST00000123924 2328 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Tpm1P58771 Gm26580-201ENSMUST00000181002 2095 ntTSL 5 BASIC19.12■□□□□ 0.65
Tpm1P58771 Acap3-201ENSMUST00000079031 4301 ntTSL 5 BASIC19.11■□□□□ 0.65
Tpm1P58771 Snapc2-201ENSMUST00000011981 1536 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Tpm1P58771 Gna12-201ENSMUST00000000153 3416 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Tpm1P58771 Nes-203ENSMUST00000160694 5958 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
Tpm1P58771 Espn-209ENSMUST00000105655 1350 ntTSL 5 BASIC19.11■□□□□ 0.65
Tpm1P58771 Espn-211ENSMUST00000105657 1375 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Tpm1P58771 Emc8-201ENSMUST00000034277 4942 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Tpm1P58771 Wdfy1-202ENSMUST00000113510 704 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Tpm1P58771 Wdfy1-203ENSMUST00000113511 704 ntTSL 5 BASIC19.11■□□□□ 0.65
Tpm1P58771 Gm13216-201ENSMUST00000117145 591 ntBASIC19.11■□□□□ 0.65
Tpm1P58771 Wdfy1-201ENSMUST00000048820 717 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Tpm1P58771 Nes-201ENSMUST00000090973 6126 ntAPPRIS P2 TSL 1 (best) BASIC19.11■□□□□ 0.65
Tpm1P58771 Myo15b-202ENSMUST00000093911 9340 ntAPPRIS P1 TSL 5 BASIC19.11■□□□□ 0.65
Tpm1P58771 Itgb4-201ENSMUST00000021107 6014 ntAPPRIS P2 TSL 5 BASIC19.11■□□□□ 0.65
Tpm1P58771 Ubr2-201ENSMUST00000113335 5691 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
Tpm1P58771 Ntrk1-201ENSMUST00000029712 2588 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Tpm1P58771 Cdc123-201ENSMUST00000043864 1827 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Tpm1P58771 Pole4-201ENSMUST00000095786 1769 ntAPPRIS P2 TSL 1 (best) BASIC19.11■□□□□ 0.65
Tpm1P58771 Pdk3-201ENSMUST00000045748 2115 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Tpm1P58771 Pnpt1-201ENSMUST00000020756 2707 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Tpm1P58771 Slc47a1-201ENSMUST00000010267 2639 ntAPPRIS P1 TSL 2 BASIC19.1■□□□□ 0.65
Tpm1P58771 Rprd1b-207ENSMUST00000152452 1910 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Tpm1P58771 Mycl-201ENSMUST00000030407 3501 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Tpm1P58771 Appl1-201ENSMUST00000036570 7642 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Tpm1P58771 4930474N05Rik-203ENSMUST00000226305 2313 ntAPPRIS P1 BASIC19.1■□□□□ 0.65
Tpm1P58771 Etv2-201ENSMUST00000108147 1048 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Tpm1P58771 Ccdc84-211ENSMUST00000217270 681 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Tpm1P58771 Erh-205ENSMUST00000218740 981 ntTSL 2 BASIC19.1■□□□□ 0.65
Tpm1P58771 Kcmf1-201ENSMUST00000068697 3251 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Tpm1P58771 Gas2-201ENSMUST00000051912 2181 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Tpm1P58771 Fiz1-203ENSMUST00000167804 2637 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Tpm1P58771 Cyp2r1-201ENSMUST00000032908 1627 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Tpm1P58771 Col11a2-201ENSMUST00000087497 6048 ntAPPRIS P2 TSL 2 BASIC19.1■□□□□ 0.65
Tpm1P58771 Tmem125-201ENSMUST00000060214 1864 ntAPPRIS P1 TSL 2 BASIC19.09■□□□□ 0.65
Tpm1P58771 Gm10649-203ENSMUST00000148066 1812 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
Tpm1P58771 Ift74-201ENSMUST00000030311 2139 ntAPPRIS P1 TSL 5 BASIC19.09■□□□□ 0.65
Tpm1P58771 Tgds-201ENSMUST00000022727 1682 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Tpm1P58771 Zfp367-202ENSMUST00000117241 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
Tpm1P58771 1810059H22Rik-205ENSMUST00000204570 690 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
Tpm1P58771 Snrpc-201ENSMUST00000071006 870 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Tpm1P58771 Vstm5-201ENSMUST00000034413 1991 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Tpm1P58771 Fbxl7-201ENSMUST00000059204 4632 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Tpm1P58771 Wdr41-203ENSMUST00000160115 2851 ntTSL 5 BASIC19.09■□□□□ 0.65
Tpm1P58771 Ormdl3-201ENSMUST00000052919 2184 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Tpm1P58771 Cdh24-201ENSMUST00000067784 3489 ntAPPRIS P1 TSL 5 BASIC19.09■□□□□ 0.65
Tpm1P58771 Wdr1-201ENSMUST00000005234 3089 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Tpm1P58771 Shank1-201ENSMUST00000107934 6477 ntAPPRIS ALT2 TSL 5 BASIC19.08■□□□□ 0.65
Tpm1P58771 Kat14-208ENSMUST00000147747 3299 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
Tpm1P58771 Evpl-201ENSMUST00000037007 6384 ntAPPRIS P1 TSL 2 BASIC19.08■□□□□ 0.65
Tpm1P58771 Wdr20-205ENSMUST00000193053 1351 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
Tpm1P58771 Krt86-201ENSMUST00000088049 1960 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Tpm1P58771 Fam129c-208ENSMUST00000143662 2267 ntAPPRIS P1 TSL 5 BASIC19.08■□□□□ 0.65
Tpm1P58771 Adamts17-202ENSMUST00000107478 6416 ntAPPRIS ALT2 TSL 5 BASIC19.08■□□□□ 0.65
Tpm1P58771 Itga6-201ENSMUST00000028522 4310 ntAPPRIS P3 TSL 1 (best) BASIC19.08■□□□□ 0.65
Tpm1P58771 Rock1-201ENSMUST00000067947 6187 ntAPPRIS P1 TSL 5 BASIC19.08■□□□□ 0.65
Tpm1P58771 Gm2399-201ENSMUST00000104944 225 ntBASIC19.08■□□□□ 0.64
Tpm1P58771 Immp2l-203ENSMUST00000134965 977 ntAPPRIS P1 TSL 5 BASIC19.08■□□□□ 0.64
Tpm1P58771 Nudt14-201ENSMUST00000002881 734 ntTSL 2 BASIC19.08■□□□□ 0.64
Tpm1P58771 Gpr150-201ENSMUST00000056130 2146 ntAPPRIS P1 BASIC19.08■□□□□ 0.64
Tpm1P58771 Gm10435-202ENSMUST00000162526 2878 ntTSL 5 BASIC19.08■□□□□ 0.64
Tpm1P58771 Robo3-202ENSMUST00000115038 4797 ntAPPRIS P2 TSL 5 BASIC19.08■□□□□ 0.64
Tpm1P58771 Msmo1-201ENSMUST00000034015 2044 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Tpm1P58771 Ap1g1-202ENSMUST00000093157 6899 ntAPPRIS P3 TSL 5 BASIC19.08■□□□□ 0.64
Tpm1P58771 Dlgap1-207ENSMUST00000133983 7173 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.64
Tpm1P58771 Adamts19-201ENSMUST00000052907 4666 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Tpm1P58771 Rrp9-201ENSMUST00000047721 1586 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Tpm1P58771 Six3os1-212ENSMUST00000177220 5601 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
Tpm1P58771 Adam23-201ENSMUST00000087374 6426 ntAPPRIS P2 TSL 1 (best) BASIC19.07■□□□□ 0.64
Tpm1P58771 a-202ENSMUST00000109697 705 ntAPPRIS P1 TSL 5 BASIC19.07■□□□□ 0.64
Tpm1P58771 Dnajc19-204ENSMUST00000120805 551 ntTSL 2 BASIC19.07■□□□□ 0.64
Tpm1P58771 1700012B09Rik-204ENSMUST00000191047 654 ntAPPRIS ALT2 TSL 3 BASIC19.07■□□□□ 0.64
Tpm1P58771 Gm10033-202ENSMUST00000211874 928 ntBASIC19.07■□□□□ 0.64
Tpm1P58771 Nfu1-201ENSMUST00000032060 948 ntAPPRIS P3 TSL 1 (best) BASIC19.07■□□□□ 0.64
Tpm1P58771 Arv1-201ENSMUST00000034463 1165 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Tpm1P58771 Cmip-202ENSMUST00000166750 2408 ntAPPRIS P1 TSL 5 BASIC19.07■□□□□ 0.64
Tpm1P58771 Grid2-201ENSMUST00000095852 5860 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Tpm1P58771 Anapc2-201ENSMUST00000028341 3004 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Tpm1P58771 Susd1-202ENSMUST00000107544 3220 ntAPPRIS ALT2 TSL 5 BASIC19.07■□□□□ 0.64
Tpm1P58771 Aim2-204ENSMUST00000166137 2079 ntAPPRIS P1 TSL 5 BASIC19.07■□□□□ 0.64
Tpm1P58771 Caml-201ENSMUST00000021963 1382 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Tpm1P58771 F12-201ENSMUST00000021948 1960 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Tpm1P58771 Anapc7-201ENSMUST00000031422 2751 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Tpm1P58771 Aftph-201ENSMUST00000035350 3998 ntAPPRIS P3 TSL 1 (best) BASIC19.06■□□□□ 0.64
Tpm1P58771 9430097D07Rik-201ENSMUST00000100190 1501 ntAPPRIS P1 BASIC19.06■□□□□ 0.64
Tpm1P58771 6430548M08Rik-201ENSMUST00000034281 5564 ntAPPRIS P3 TSL 1 (best) BASIC19.06■□□□□ 0.64
Tpm1P58771 AC125311.2-201ENSMUST00000227477 1940 ntBASIC19.06■□□□□ 0.64
Tpm1P58771 Slc35f1-201ENSMUST00000105473 4941 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Tpm1P58771 Gm11627-202ENSMUST00000107081 818 ntAPPRIS P1 TSL 2 BASIC19.06■□□□□ 0.64
Tpm1P58771 D830036C21Rik-201ENSMUST00000207444 453 ntTSL 3 BASIC19.06■□□□□ 0.64
Tpm1P58771 AC061963.1-203ENSMUST00000213473 453 ntTSL 3 BASIC19.06■□□□□ 0.64
Retrieved 100 of 76,532 protein–RNA pairs in 32.3 ms