Protein–RNA interactions for Protein: P54729

Nub1, NEDD8 ultimate buster 1, mousemouse

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nub1P54729 Matn4-202ENSMUST00000103104 2243 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Nub1P54729 Gm7638-201ENSMUST00000121348 967 ntBASIC18.4■□□□□ 0.54
Nub1P54729 Prlh-201ENSMUST00000166281 276 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Nub1P54729 Sct-202ENSMUST00000167790 507 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
Nub1P54729 Cmtm7-201ENSMUST00000035009 993 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Nub1P54729 Sct-201ENSMUST00000046156 534 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
Nub1P54729 Klhl33-201ENSMUST00000164415 1602 ntTSL 5 BASIC18.4■□□□□ 0.54
Nub1P54729 Tmem94-202ENSMUST00000103033 5238 ntAPPRIS P2 TSL 2 BASIC18.4■□□□□ 0.54
Nub1P54729 Mmp28-201ENSMUST00000021020 2311 ntAPPRIS P4 TSL 1 (best) BASIC18.4■□□□□ 0.54
Nub1P54729 Rbmxl1-201ENSMUST00000049245 1695 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Nub1P54729 Akt2-205ENSMUST00000108344 4544 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Nub1P54729 Carmn-201ENSMUST00000181155 1778 ntTSL 2 BASIC18.4■□□□□ 0.54
Nub1P54729 6330411D24Rik-201ENSMUST00000211105 1568 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Nub1P54729 Ptprd-206ENSMUST00000107289 9899 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.53
Nub1P54729 Ptprs-201ENSMUST00000067538 6855 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Nub1P54729 Zxdc-203ENSMUST00000113539 4864 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
Nub1P54729 Adra2a-201ENSMUST00000036700 3801 ntAPPRIS P1 BASIC18.39■□□□□ 0.53
Nub1P54729 Odf1-201ENSMUST00000081966 1105 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Nub1P54729 Hoxb4-201ENSMUST00000049241 2566 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Nub1P54729 Gnao1-201ENSMUST00000034198 2948 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Nub1P54729 Proser2-201ENSMUST00000054254 2061 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Nub1P54729 Ets1-206ENSMUST00000184887 2107 ntTSL 5 BASIC18.38■□□□□ 0.53
Nub1P54729 Dbn1-202ENSMUST00000109921 2378 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Nub1P54729 Atad3a-201ENSMUST00000030903 2413 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Nub1P54729 Gm20472-201ENSMUST00000174403 1240 ntBASIC18.38■□□□□ 0.53
Nub1P54729 Ndufa12-201ENSMUST00000020209 1110 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Nub1P54729 Cib1-207ENSMUST00000206084 772 ntTSL 3 BASIC18.38■□□□□ 0.53
Nub1P54729 AC135963.1-201ENSMUST00000211640 717 ntBASIC18.38■□□□□ 0.53
Nub1P54729 4930554C24Rik-202ENSMUST00000216019 1159 ntTSL 5 BASIC18.38■□□□□ 0.53
Nub1P54729 Fgf8-202ENSMUST00000026241 1168 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Nub1P54729 Lce1m-201ENSMUST00000029520 874 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Nub1P54729 Dctn3-201ENSMUST00000030158 973 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Nub1P54729 Cib1-202ENSMUST00000071457 702 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Nub1P54729 Cables1-201ENSMUST00000046948 3202 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
Nub1P54729 Smim3-201ENSMUST00000042710 1984 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Nub1P54729 Trim67-202ENSMUST00000167588 8735 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
Nub1P54729 Ggt6-202ENSMUST00000100903 1387 ntTSL 5 BASIC18.38■□□□□ 0.53
Nub1P54729 Col17a1-201ENSMUST00000026045 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Nub1P54729 Clcn2-202ENSMUST00000120099 2812 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
Nub1P54729 Lhx6-208ENSMUST00000148852 1481 ntTSL 5 BASIC18.38■□□□□ 0.53
Nub1P54729 Plekha7-210ENSMUST00000182834 5257 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Nub1P54729 Vac14-201ENSMUST00000034190 3069 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Nub1P54729 Fam57b-201ENSMUST00000079423 2328 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Nub1P54729 Hoxc9-201ENSMUST00000001706 2374 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Nub1P54729 Slc25a3-201ENSMUST00000076694 1612 ntAPPRIS P2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Nub1P54729 Kcnab3-201ENSMUST00000018614 2538 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Nub1P54729 Braf-201ENSMUST00000002487 9728 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Nub1P54729 Gm13032-201ENSMUST00000151848 2001 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Nub1P54729 Ubac2-201ENSMUST00000039803 2139 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Nub1P54729 Plppr4-201ENSMUST00000061071 5696 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Nub1P54729 Nxnl1-201ENSMUST00000048243 2285 ntAPPRIS P1 TSL 2 BASIC18.37■□□□□ 0.53
Nub1P54729 Tle4-201ENSMUST00000052011 4555 ntAPPRIS P2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Nub1P54729 Cask-203ENSMUST00000115436 8260 ntAPPRIS P1 TSL 2 BASIC18.37■□□□□ 0.53
Nub1P54729 Mag-201ENSMUST00000040548 2419 ntAPPRIS P2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Nub1P54729 Ptprj-204ENSMUST00000168621 7634 ntAPPRIS P4 TSL 1 (best) BASIC18.37■□□□□ 0.53
Nub1P54729 C1qtnf5-202ENSMUST00000114816 1259 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Nub1P54729 Nsl1-203ENSMUST00000139340 837 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Nub1P54729 Gm13647-201ENSMUST00000154654 622 ntTSL 5 BASIC18.37■□□□□ 0.53
Nub1P54729 Zfas1-205ENSMUST00000189909 738 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Nub1P54729 Gm37025-201ENSMUST00000195159 829 ntBASIC18.37■□□□□ 0.53
Nub1P54729 Gm19610-201ENSMUST00000202894 408 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Nub1P54729 Olfr1411-201ENSMUST00000073748 972 ntAPPRIS P1 BASIC18.37■□□□□ 0.53
Nub1P54729 Ntrk1-201ENSMUST00000029712 2588 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Nub1P54729 Coil-201ENSMUST00000036649 2607 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Nub1P54729 Col4a3bp-201ENSMUST00000077672 2746 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Nub1P54729 Rab1a-201ENSMUST00000020358 2827 ntAPPRIS ALT1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Nub1P54729 Prss54-205ENSMUST00000213096 1501 ntAPPRIS P3 TSL 5 BASIC18.37■□□□□ 0.53
Nub1P54729 Hoxb2-201ENSMUST00000100523 1628 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Nub1P54729 Ptprt-201ENSMUST00000109441 6623 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Nub1P54729 Sept10-203ENSMUST00000220156 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Nub1P54729 Vps4a-201ENSMUST00000034388 2178 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Nub1P54729 Fiz1-203ENSMUST00000167804 2637 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Nub1P54729 Eepd1-201ENSMUST00000040677 2723 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Nub1P54729 Kmt5b-203ENSMUST00000113968 3216 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Nub1P54729 Senp2-201ENSMUST00000023561 4499 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Nub1P54729 Ocel1-203ENSMUST00000110052 5285 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Nub1P54729 2810408A11Rik-203ENSMUST00000102580 1640 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
Nub1P54729 Mmd-202ENSMUST00000107887 1654 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Nub1P54729 0610012G03Rik-201ENSMUST00000202722 1445 ntAPPRIS P1 BASIC18.36■□□□□ 0.53
Nub1P54729 Stk11-210ENSMUST00000213772 1239 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Nub1P54729 Atp2a2-201ENSMUST00000031423 4486 ntAPPRIS P4 TSL 1 (best) BASIC18.36■□□□□ 0.53
Nub1P54729 Rnf112-202ENSMUST00000060255 3161 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Nub1P54729 Pfdn4-201ENSMUST00000063682 935 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Nub1P54729 Fxn-201ENSMUST00000081333 1114 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Nub1P54729 Gzmd-201ENSMUST00000082093 964 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Nub1P54729 Klhl31-201ENSMUST00000057781 6494 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Nub1P54729 5031425F14Rik-201ENSMUST00000127920 2098 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Nub1P54729 Ern1-204ENSMUST00000106801 1957 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Nub1P54729 Nadk2-202ENSMUST00000100789 3578 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
Nub1P54729 A930029G22Rik-201ENSMUST00000181032 1710 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Nub1P54729 Atp2c1-201ENSMUST00000038118 4876 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
Nub1P54729 Trim14-201ENSMUST00000046897 1429 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Nub1P54729 Mroh5-201ENSMUST00000071419 2766 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Nub1P54729 Npm3-ps1-201ENSMUST00000119728 528 ntBASIC18.35■□□□□ 0.53
Nub1P54729 Gm17661-201ENSMUST00000170317 270 ntBASIC18.35■□□□□ 0.53
Nub1P54729 Cldn14-205ENSMUST00000177648 1266 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
Nub1P54729 Mir6982-201ENSMUST00000184354 68 ntBASIC18.35■□□□□ 0.53
Nub1P54729 Gm34933-201ENSMUST00000203245 1067 ntTSL 5 BASIC18.35■□□□□ 0.53
Nub1P54729 Cnih3-204ENSMUST00000209607 564 ntTSL 5 BASIC18.35■□□□□ 0.53
Nub1P54729 Npm3-201ENSMUST00000070215 888 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Retrieved 100 of 76,532 protein–RNA pairs in 20.3 ms