Protein–RNA interactions for Protein: P35441

Thbs1, Thrombospondin-1, mousemouse

Predictions only

Length 1,170 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Thbs1P35441 Tedc2-201ENSMUST00000024930 2166 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Thbs1P35441 Arhgef16-201ENSMUST00000030898 2860 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Thbs1P35441 Cck-201ENSMUST00000035120 691 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Thbs1P35441 Prss33-201ENSMUST00000059906 1360 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Thbs1P35441 Sbf1-205ENSMUST00000144585 6165 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Thbs1P35441 Tmem214-202ENSMUST00000201203 6110 ntAPPRIS P2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Thbs1P35441 Baiap2-204ENSMUST00000106231 4005 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Thbs1P35441 Tmtc4-209ENSMUST00000148661 2719 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Thbs1P35441 Vgf-201ENSMUST00000041543 2553 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Thbs1P35441 Rbpms-201ENSMUST00000033994 2375 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Thbs1P35441 Fmr1-201ENSMUST00000088546 4409 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Thbs1P35441 Ldb1-205ENSMUST00000137771 2014 ntTSL 5 BASIC15.8■□□□□ 0.12
Thbs1P35441 Ttc13-201ENSMUST00000041614 3038 ntTSL 2 BASIC15.8■□□□□ 0.12
Thbs1P35441 Snap91-202ENSMUST00000074468 4336 ntAPPRIS ALT2 TSL 5 BASIC15.8■□□□□ 0.12
Thbs1P35441 Zbtb24-202ENSMUST00000213797 2734 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Thbs1P35441 Fam71e1-202ENSMUST00000205359 1307 ntAPPRIS ALT2 TSL 2 BASIC15.8■□□□□ 0.12
Thbs1P35441 Igflr1-202ENSMUST00000172251 1224 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Thbs1P35441 Ppic-201ENSMUST00000025419 1286 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Thbs1P35441 Sh3gl2-203ENSMUST00000107188 2286 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Thbs1P35441 Arfip2-202ENSMUST00000084782 2254 ntAPPRIS P2 TSL 5 BASIC15.8■□□□□ 0.12
Thbs1P35441 Vps53-203ENSMUST00000108419 2209 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Thbs1P35441 Tbc1d9b-202ENSMUST00000101270 5213 ntAPPRIS ALT2 TSL 5 BASIC15.8■□□□□ 0.12
Thbs1P35441 Plekha4-206ENSMUST00000211155 2044 ntAPPRIS ALT2 TSL 5 BASIC15.8■□□□□ 0.12
Thbs1P35441 Whrn-206ENSMUST00000102867 4013 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Thbs1P35441 Mapk8ip3-221ENSMUST00000178969 5579 ntAPPRIS ALT2 TSL 5 BASIC15.8■□□□□ 0.12
Thbs1P35441 Mlxip-202ENSMUST00000111596 2653 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Thbs1P35441 Acaa1a-201ENSMUST00000039784 1762 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Thbs1P35441 Dpep3-201ENSMUST00000034371 1698 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Thbs1P35441 2810408A11Rik-203ENSMUST00000102580 1640 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
Thbs1P35441 Pigu-201ENSMUST00000077626 1636 ntAPPRIS P2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Thbs1P35441 Ube2z-201ENSMUST00000100528 3997 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Thbs1P35441 Eif2b5-201ENSMUST00000003320 3186 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Thbs1P35441 Hspa8-201ENSMUST00000015800 2394 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Thbs1P35441 Wnt10b-207ENSMUST00000228594 1510 ntAPPRIS P1 BASIC15.79■□□□□ 0.12
Thbs1P35441 Eda-204ENSMUST00000113777 1056 ntTSL 5 BASIC15.79■□□□□ 0.12
Thbs1P35441 Eda-201ENSMUST00000071453 1152 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Thbs1P35441 Yipf2-204ENSMUST00000213809 1883 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Thbs1P35441 Armc10-202ENSMUST00000095495 2700 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Thbs1P35441 Ptpre-207ENSMUST00000211140 5753 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
Thbs1P35441 Gm11841-201ENSMUST00000117060 1963 ntBASIC15.78■□□□□ 0.12
Thbs1P35441 Rbpj-203ENSMUST00000113865 5440 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Thbs1P35441 Uhmk1-201ENSMUST00000027979 7864 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Thbs1P35441 Gabbr1-202ENSMUST00000172789 1460 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Thbs1P35441 Nfe2l1-202ENSMUST00000107657 3869 ntAPPRIS P3 TSL 5 BASIC15.78■□□□□ 0.12
Thbs1P35441 Gm27029-201ENSMUST00000107257 1898 ntAPPRIS ALT2 TSL 5 BASIC15.78■□□□□ 0.12
Thbs1P35441 Yipf2-202ENSMUST00000078572 1894 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Thbs1P35441 Fam109a-203ENSMUST00000198271 2335 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Thbs1P35441 Tmx1-201ENSMUST00000021471 2795 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Thbs1P35441 Enoph1-202ENSMUST00000169390 1833 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Thbs1P35441 Krt6a-201ENSMUST00000023788 2256 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Thbs1P35441 Josd2-206ENSMUST00000121922 684 ntTSL 5 BASIC15.78■□□□□ 0.12
Thbs1P35441 Ccnd3-202ENSMUST00000171031 2113 ntAPPRIS P1 TSL 5 BASIC15.78■□□□□ 0.12
Thbs1P35441 Creb1-207ENSMUST00000187811 1255 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Thbs1P35441 Lonp1-201ENSMUST00000047226 2963 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Thbs1P35441 Tmem270-201ENSMUST00000047305 932 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Thbs1P35441 Cldn24-201ENSMUST00000079639 663 ntAPPRIS P1 BASIC15.78■□□□□ 0.12
Thbs1P35441 Chtf8-206ENSMUST00000177068 2931 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Thbs1P35441 Dnajc19-201ENSMUST00000011029 2499 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Thbs1P35441 Ankrd9-202ENSMUST00000128353 2577 ntAPPRIS P2 TSL 1 (best) BASIC15.78■□□□□ 0.12
Thbs1P35441 Kmt5b-202ENSMUST00000052699 3290 ntAPPRIS ALT2 TSL 5 BASIC15.78■□□□□ 0.12
Thbs1P35441 Otx2-204ENSMUST00000122009 1737 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Thbs1P35441 Mdfi-202ENSMUST00000066368 1711 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Thbs1P35441 Plppr3-207ENSMUST00000167250 3063 ntAPPRIS ALT2 TSL 2 BASIC15.77■□□□□ 0.12
Thbs1P35441 Cdv3-201ENSMUST00000035484 3387 ntAPPRIS P3 TSL 1 (best) BASIC15.77■□□□□ 0.12
Thbs1P35441 Tjp1-202ENSMUST00000102592 7049 ntAPPRIS P3 TSL 1 (best) BASIC15.77■□□□□ 0.12
Thbs1P35441 Prkar2a-201ENSMUST00000035220 4965 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Thbs1P35441 Wbp1-202ENSMUST00000113936 1314 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Thbs1P35441 Gm6093-201ENSMUST00000221792 1623 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
Thbs1P35441 Zfp467-208ENSMUST00000114564 626 ntTSL 2 BASIC15.77■□□□□ 0.12
Thbs1P35441 C1qtnf5-202ENSMUST00000114816 1259 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Thbs1P35441 Aprt-204ENSMUST00000212093 723 ntTSL 2 BASIC15.77■□□□□ 0.12
Thbs1P35441 Gm45244-201ENSMUST00000211328 2200 ntBASIC15.77■□□□□ 0.12
Thbs1P35441 Polr3e-203ENSMUST00000207481 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.12
Thbs1P35441 Lpin2-213ENSMUST00000156570 1586 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
Thbs1P35441 Krt81-201ENSMUST00000061185 1857 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Thbs1P35441 Mbp-201ENSMUST00000047865 2492 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
Thbs1P35441 Zbtb22-201ENSMUST00000053429 2611 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Thbs1P35441 Necab3-202ENSMUST00000109716 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.11
Thbs1P35441 Iqsec2-202ENSMUST00000112604 5967 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.11
Thbs1P35441 Krt13-201ENSMUST00000007275 1654 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Thbs1P35441 Rnf128-201ENSMUST00000113026 2750 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Thbs1P35441 Apba1-201ENSMUST00000025830 6632 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Thbs1P35441 Ptprf-201ENSMUST00000049074 7656 ntAPPRIS P1 TSL 5 BASIC15.76■□□□□ 0.11
Thbs1P35441 Cerkl-205ENSMUST00000143974 1623 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Thbs1P35441 Gnas-222ENSMUST00000180362 1645 ntTSL 5 BASIC15.76■□□□□ 0.11
Thbs1P35441 Rybp-201ENSMUST00000101118 4503 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Thbs1P35441 Gapvd1-203ENSMUST00000113099 5758 ntAPPRIS ALT2 TSL 5 BASIC15.76■□□□□ 0.11
Thbs1P35441 Dtnbp1-203ENSMUST00000220555 1589 ntAPPRIS ALT2 TSL 5 BASIC15.76■□□□□ 0.11
Thbs1P35441 Zfand5-201ENSMUST00000025659 2834 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Thbs1P35441 AC175538.1-201ENSMUST00000225343 1269 ntBASIC15.76■□□□□ 0.11
Thbs1P35441 Prss21-201ENSMUST00000024928 1094 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Thbs1P35441 Cfap20-201ENSMUST00000034249 1295 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Thbs1P35441 Carmn-201ENSMUST00000181155 1778 ntTSL 2 BASIC15.76■□□□□ 0.11
Thbs1P35441 Pard3-209ENSMUST00000160272 5815 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
Thbs1P35441 Rhof-201ENSMUST00000031401 2208 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Thbs1P35441 Spata18-202ENSMUST00000071077 1978 ntAPPRIS P2 TSL 5 BASIC15.76■□□□□ 0.11
Thbs1P35441 Pik3r2-201ENSMUST00000034296 3165 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Thbs1P35441 Mmd-201ENSMUST00000004050 2677 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Thbs1P35441 Plppr2-203ENSMUST00000190387 2608 ntAPPRIS P2 TSL 1 (best) BASIC15.76■□□□□ 0.11
Thbs1P35441 Bean1-201ENSMUST00000093245 3199 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
Retrieved 100 of 76,532 protein–RNA pairs in 29.5 ms