Protein–RNA interactions for Protein: P33435

Mmp13, Collagenase 3, mousemouse

Predictions only

Length 472 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mmp13P33435 Dtwd2-203ENSMUST00000163590 2857 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Mmp13P33435 4833418N02Rik-202ENSMUST00000146560 1495 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Mmp13P33435 Fcgrt-201ENSMUST00000003512 1770 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Mmp13P33435 Gm38534-201ENSMUST00000206566 1909 ntTSL 5 BASIC17.51■□□□□ 0.39
Mmp13P33435 Rab11fip3-202ENSMUST00000120691 5103 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Mmp13P33435 Tubgcp4-203ENSMUST00000110658 4250 ntAPPRIS ALT1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Mmp13P33435 Unc50-203ENSMUST00000118059 1179 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
Mmp13P33435 Gssos2-201ENSMUST00000130859 727 ntTSL 3 BASIC17.51■□□□□ 0.39
Mmp13P33435 Dohh-206ENSMUST00000131968 672 ntAPPRIS P1 TSL 3 BASIC17.51■□□□□ 0.39
Mmp13P33435 Ramp1-203ENSMUST00000188475 711 ntTSL 3 BASIC17.51■□□□□ 0.39
Mmp13P33435 Gm10138-203ENSMUST00000206952 366 ntBASIC17.51■□□□□ 0.39
Mmp13P33435 Cck-201ENSMUST00000035120 691 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Mmp13P33435 4930505A04Rik-201ENSMUST00000041763 904 ntAPPRIS P1 TSL 2 BASIC17.51■□□□□ 0.39
Mmp13P33435 Aipl1-201ENSMUST00000048207 2309 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Mmp13P33435 Cpd-201ENSMUST00000021201 7946 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Mmp13P33435 Ppan-201ENSMUST00000004203 1670 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Mmp13P33435 Nsun5-201ENSMUST00000000940 2243 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Mmp13P33435 Dag1-201ENSMUST00000080435 4364 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Mmp13P33435 Rara-202ENSMUST00000107473 3238 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Mmp13P33435 Pcmt1-202ENSMUST00000159917 2491 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
Mmp13P33435 Fam57b-201ENSMUST00000079423 2328 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Mmp13P33435 Vamp4-203ENSMUST00000132158 2752 ntTSL 3 BASIC17.5■□□□□ 0.39
Mmp13P33435 Kif7-202ENSMUST00000178048 4524 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Mmp13P33435 2900072N19Rik-201ENSMUST00000123840 806 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Mmp13P33435 Creb1-207ENSMUST00000187811 1255 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Mmp13P33435 Kcnn4-203ENSMUST00000205626 461 ntTSL 5 BASIC17.5■□□□□ 0.39
Mmp13P33435 Tpsb2-201ENSMUST00000069616 1081 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Mmp13P33435 Gm28265-201ENSMUST00000188201 2319 ntBASIC17.5■□□□□ 0.39
Mmp13P33435 Mex3a-201ENSMUST00000172699 5778 ntAPPRIS P1 TSL 2 BASIC17.5■□□□□ 0.39
Mmp13P33435 K230015D01Rik-201ENSMUST00000211969 1516 ntBASIC17.5■□□□□ 0.39
Mmp13P33435 Pdgfa-201ENSMUST00000046901 1543 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Mmp13P33435 Glmn-201ENSMUST00000078021 2015 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Mmp13P33435 Mycn-201ENSMUST00000043396 2674 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Mmp13P33435 Tspan4-201ENSMUST00000026585 1466 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Mmp13P33435 Evx1-201ENSMUST00000031787 2877 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Mmp13P33435 Gm11841-201ENSMUST00000117060 1963 ntBASIC17.49■□□□□ 0.39
Mmp13P33435 Vangl2-203ENSMUST00000111264 2349 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Mmp13P33435 Zbtb45-201ENSMUST00000051390 2171 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Mmp13P33435 Coq8b-202ENSMUST00000108378 2276 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Mmp13P33435 Relt-201ENSMUST00000008462 2851 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Mmp13P33435 Fev-202ENSMUST00000159232 928 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Mmp13P33435 Gm19391-201ENSMUST00000196653 999 ntTSL 3 BASIC17.49■□□□□ 0.39
Mmp13P33435 Sh2b1-203ENSMUST00000205440 3089 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Mmp13P33435 Atf6b-202ENSMUST00000173984 2315 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
Mmp13P33435 Polr3e-203ENSMUST00000207481 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Mmp13P33435 Trmo-202ENSMUST00000086563 1554 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
Mmp13P33435 Espn-206ENSMUST00000103196 1323 ntTSL 5 BASIC17.48■□□□□ 0.39
Mmp13P33435 Mipep-201ENSMUST00000063562 3015 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Mmp13P33435 Rnf128-201ENSMUST00000113026 2750 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Mmp13P33435 Gm26580-201ENSMUST00000181002 2095 ntTSL 5 BASIC17.48■□□□□ 0.39
Mmp13P33435 Trim7-201ENSMUST00000046903 2161 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
Mmp13P33435 Clasrp-201ENSMUST00000086041 2180 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Mmp13P33435 Spdef-205ENSMUST00000167489 1708 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
Mmp13P33435 Gusb-202ENSMUST00000111307 932 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Mmp13P33435 Gtf2a2-204ENSMUST00000119905 622 ntTSL 2 BASIC17.48■□□□□ 0.39
Mmp13P33435 Cacna2d1-207ENSMUST00000196750 1272 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Mmp13P33435 Ccnd2-202ENSMUST00000201066 983 ntTSL 2 BASIC17.48■□□□□ 0.39
Mmp13P33435 H2-Eb1-201ENSMUST00000074557 1184 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Mmp13P33435 Dhrs7-201ENSMUST00000021512 1385 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Mmp13P33435 Guf1-202ENSMUST00000087228 3433 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Mmp13P33435 1810013L24Rik-201ENSMUST00000023150 4066 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Mmp13P33435 Dvl2-201ENSMUST00000019362 2968 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Mmp13P33435 Shroom3-201ENSMUST00000113051 6435 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Mmp13P33435 Lrriq4-203ENSMUST00000172350 1797 ntAPPRIS P3 TSL 5 BASIC17.48■□□□□ 0.39
Mmp13P33435 Tnfsf14-201ENSMUST00000005976 1859 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Mmp13P33435 Akap8l-201ENSMUST00000050214 2075 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Mmp13P33435 Shisa2-201ENSMUST00000053949 3119 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Mmp13P33435 Atxn7-201ENSMUST00000022257 6853 ntAPPRIS P2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Mmp13P33435 Ermp1-203ENSMUST00000159692 7058 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Mmp13P33435 Hmga1-205ENSMUST00000118599 529 ntAPPRIS P3 TSL 3 BASIC17.47■□□□□ 0.39
Mmp13P33435 1110046J04Rik-201ENSMUST00000147622 397 ntTSL 3 BASIC17.47■□□□□ 0.39
Mmp13P33435 Gm45148-201ENSMUST00000208578 513 ntTSL 5 BASIC17.47■□□□□ 0.39
Mmp13P33435 Arhgef33-211ENSMUST00000225658 473 ntBASIC17.47■□□□□ 0.39
Mmp13P33435 Cmc1-201ENSMUST00000044220 1169 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Mmp13P33435 Prr29-201ENSMUST00000009354 1112 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Mmp13P33435 Cyb5a-204ENSMUST00000160180 1363 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Mmp13P33435 Rnf146-202ENSMUST00000160144 4323 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Mmp13P33435 Car2-201ENSMUST00000029078 1788 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Mmp13P33435 Rbpms-203ENSMUST00000053251 2466 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Mmp13P33435 Nadk2-203ENSMUST00000100790 3665 ntAPPRIS ALT2 TSL 5 BASIC17.47■□□□□ 0.39
Mmp13P33435 Gm16835-201ENSMUST00000140488 2809 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Mmp13P33435 Cap1-202ENSMUST00000106255 2737 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Mmp13P33435 Fam57a-201ENSMUST00000094014 2130 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Mmp13P33435 Klc3-202ENSMUST00000108457 1632 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
Mmp13P33435 Shroom3-204ENSMUST00000168878 5630 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Mmp13P33435 Lad1-201ENSMUST00000038760 2993 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Mmp13P33435 Fhl1-203ENSMUST00000114769 2770 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Mmp13P33435 Snx16-201ENSMUST00000029047 2288 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
Mmp13P33435 Gm27029-201ENSMUST00000107257 1898 ntAPPRIS ALT2 TSL 5 BASIC17.46■□□□□ 0.39
Mmp13P33435 Bcs1l-202ENSMUST00000113732 1679 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
Mmp13P33435 Tle2-213ENSMUST00000146358 2749 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
Mmp13P33435 Homez-202ENSMUST00000142283 4713 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Mmp13P33435 Nfe2l3-201ENSMUST00000005103 2544 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Mmp13P33435 Rasgrp2-201ENSMUST00000035716 2219 ntAPPRIS P1 TSL 2 BASIC17.46■□□□□ 0.39
Mmp13P33435 Dnaaf3-201ENSMUST00000094897 2224 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Mmp13P33435 Nnat-205ENSMUST00000153739 1146 ntAPPRIS ALT1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Mmp13P33435 Gm17035-201ENSMUST00000170557 419 ntTSL 3 BASIC17.46■□□□□ 0.39
Mmp13P33435 Nnat-206ENSMUST00000172487 404 ntTSL 5 BASIC17.46■□□□□ 0.39
Mmp13P33435 Gm10698-201ENSMUST00000182663 604 ntBASIC17.46■□□□□ 0.39
Mmp13P33435 Ddn-201ENSMUST00000075444 3740 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Retrieved 100 of 76,532 protein–RNA pairs in 53 ms