Protein–RNA interactions for Protein: P33435

Mmp13, Collagenase 3, mousemouse

Predictions only

Length 472 aa.

Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mmp13P33435 Dtwd2-203ENSMUST00000163590 2857 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Mmp13P33435 4833418N02Rik-202ENSMUST00000146560 1495 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Mmp13P33435 Fcgrt-201ENSMUST00000003512 1770 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Mmp13P33435 Gm38534-201ENSMUST00000206566 1909 ntTSL 5 BASIC17.51■□□□□ 0.39
Mmp13P33435 Rab11fip3-202ENSMUST00000120691 5103 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Mmp13P33435 Tubgcp4-203ENSMUST00000110658 4250 ntAPPRIS ALT1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Mmp13P33435 Unc50-203ENSMUST00000118059 1179 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
Mmp13P33435 Gssos2-201ENSMUST00000130859 727 ntTSL 3 BASIC17.51■□□□□ 0.39
Mmp13P33435 Dohh-206ENSMUST00000131968 672 ntAPPRIS P1 TSL 3 BASIC17.51■□□□□ 0.39
Mmp13P33435 Ramp1-203ENSMUST00000188475 711 ntTSL 3 BASIC17.51■□□□□ 0.39
Mmp13P33435 Gm10138-203ENSMUST00000206952 366 ntBASIC17.51■□□□□ 0.39
Mmp13P33435 Cck-201ENSMUST00000035120 691 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Mmp13P33435 4930505A04Rik-201ENSMUST00000041763 904 ntAPPRIS P1 TSL 2 BASIC17.51■□□□□ 0.39
Mmp13P33435 Aipl1-201ENSMUST00000048207 2309 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Mmp13P33435 Cpd-201ENSMUST00000021201 7946 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Mmp13P33435 Ppan-201ENSMUST00000004203 1670 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Mmp13P33435 Nsun5-201ENSMUST00000000940 2243 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Mmp13P33435 Dag1-201ENSMUST00000080435 4364 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Mmp13P33435 Rara-202ENSMUST00000107473 3238 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Mmp13P33435 Pcmt1-202ENSMUST00000159917 2491 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
Mmp13P33435 Fam57b-201ENSMUST00000079423 2328 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Mmp13P33435 Vamp4-203ENSMUST00000132158 2752 ntTSL 3 BASIC17.5■□□□□ 0.39
Mmp13P33435 Kif7-202ENSMUST00000178048 4524 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Mmp13P33435 2900072N19Rik-201ENSMUST00000123840 806 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Mmp13P33435 Creb1-207ENSMUST00000187811 1255 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Mmp13P33435 Kcnn4-203ENSMUST00000205626 461 ntTSL 5 BASIC17.5■□□□□ 0.39
Mmp13P33435 Tpsb2-201ENSMUST00000069616 1081 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Mmp13P33435 Gm28265-201ENSMUST00000188201 2319 ntBASIC17.5■□□□□ 0.39
Mmp13P33435 Mex3a-201ENSMUST00000172699 5778 ntAPPRIS P1 TSL 2 BASIC17.5■□□□□ 0.39
Mmp13P33435 K230015D01Rik-201ENSMUST00000211969 1516 ntBASIC17.5■□□□□ 0.39
Mmp13P33435 Pdgfa-201ENSMUST00000046901 1543 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Mmp13P33435 Glmn-201ENSMUST00000078021 2015 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Mmp13P33435 Mycn-201ENSMUST00000043396 2674 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Mmp13P33435 Tspan4-201ENSMUST00000026585 1466 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Mmp13P33435 Evx1-201ENSMUST00000031787 2877 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Mmp13P33435 Gm11841-201ENSMUST00000117060 1963 ntBASIC17.49■□□□□ 0.39
Mmp13P33435 Vangl2-203ENSMUST00000111264 2349 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Mmp13P33435 Zbtb45-201ENSMUST00000051390 2171 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Mmp13P33435 Coq8b-202ENSMUST00000108378 2276 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Mmp13P33435 Relt-201ENSMUST00000008462 2851 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Mmp13P33435 Fev-202ENSMUST00000159232 928 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Mmp13P33435 Gm19391-201ENSMUST00000196653 999 ntTSL 3 BASIC17.49■□□□□ 0.39
Mmp13P33435 Sh2b1-203ENSMUST00000205440 3089 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Mmp13P33435 Atf6b-202ENSMUST00000173984 2315 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
Mmp13P33435 Polr3e-203ENSMUST00000207481 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Mmp13P33435 Trmo-202ENSMUST00000086563 1554 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
Mmp13P33435 Espn-206ENSMUST00000103196 1323 ntTSL 5 BASIC17.48■□□□□ 0.39
Mmp13P33435 Mipep-201ENSMUST00000063562 3015 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Mmp13P33435 Rnf128-201ENSMUST00000113026 2750 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Mmp13P33435 Gm26580-201ENSMUST00000181002 2095 ntTSL 5 BASIC17.48■□□□□ 0.39
Mmp13P33435 Trim7-201ENSMUST00000046903 2161 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
Mmp13P33435 Clasrp-201ENSMUST00000086041 2180 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Mmp13P33435 Spdef-205ENSMUST00000167489 1708 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
Mmp13P33435 Gusb-202ENSMUST00000111307 932 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Mmp13P33435 Gtf2a2-204ENSMUST00000119905 622 ntTSL 2 BASIC17.48■□□□□ 0.39
Mmp13P33435 Cacna2d1-207ENSMUST00000196750 1272 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Mmp13P33435 Ccnd2-202ENSMUST00000201066 983 ntTSL 2 BASIC17.48■□□□□ 0.39
Mmp13P33435 H2-Eb1-201ENSMUST00000074557 1184 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Mmp13P33435 Dhrs7-201ENSMUST00000021512 1385 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Mmp13P33435 Guf1-202ENSMUST00000087228 3433 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Mmp13P33435 1810013L24Rik-201ENSMUST00000023150 4066 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Mmp13P33435 Dvl2-201ENSMUST00000019362 2968 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Mmp13P33435 Shroom3-201ENSMUST00000113051 6435 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Mmp13P33435 Lrriq4-203ENSMUST00000172350 1797 ntAPPRIS P3 TSL 5 BASIC17.48■□□□□ 0.39
Mmp13P33435 Tnfsf14-201ENSMUST00000005976 1859 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Mmp13P33435 Akap8l-201ENSMUST00000050214 2075 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Mmp13P33435 Shisa2-201ENSMUST00000053949 3119 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Mmp13P33435 Atxn7-201ENSMUST00000022257 6853 ntAPPRIS P2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Mmp13P33435 Ermp1-203ENSMUST00000159692 7058 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Mmp13P33435 Hmga1-205ENSMUST00000118599 529 ntAPPRIS P3 TSL 3 BASIC17.47■□□□□ 0.39
Mmp13P33435 1110046J04Rik-201ENSMUST00000147622 397 ntTSL 3 BASIC17.47■□□□□ 0.39
Mmp13P33435 Gm45148-201ENSMUST00000208578 513 ntTSL 5 BASIC17.47■□□□□ 0.39
Mmp13P33435 Arhgef33-211ENSMUST00000225658 473 ntBASIC17.47■□□□□ 0.39
Mmp13P33435 Cmc1-201ENSMUST00000044220 1169 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Mmp13P33435 Prr29-201ENSMUST00000009354 1112 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Mmp13P33435 Cyb5a-204ENSMUST00000160180 1363 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Mmp13P33435 Rnf146-202ENSMUST00000160144 4323 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Mmp13P33435 Car2-201ENSMUST00000029078 1788 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Mmp13P33435 Rbpms-203ENSMUST00000053251 2466 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Mmp13P33435 Nadk2-203ENSMUST00000100790 3665 ntAPPRIS ALT2 TSL 5 BASIC17.47■□□□□ 0.39
Mmp13P33435 Gm16835-201ENSMUST00000140488 2809 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Mmp13P33435 Cap1-202ENSMUST00000106255 2737 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Mmp13P33435 Fam57a-201ENSMUST00000094014 2130 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Mmp13P33435 Klc3-202ENSMUST00000108457 1632 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
Mmp13P33435 Shroom3-204ENSMUST00000168878 5630 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Mmp13P33435 Lad1-201ENSMUST00000038760 2993 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Mmp13P33435 Fhl1-203ENSMUST00000114769 2770 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Mmp13P33435 Snx16-201ENSMUST00000029047 2288 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
Mmp13P33435 Gm27029-201ENSMUST00000107257 1898 ntAPPRIS ALT2 TSL 5 BASIC17.46■□□□□ 0.39
Mmp13P33435 Bcs1l-202ENSMUST00000113732 1679 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
Mmp13P33435 Tle2-213ENSMUST00000146358 2749 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
Mmp13P33435 Homez-202ENSMUST00000142283 4713 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Mmp13P33435 Nfe2l3-201ENSMUST00000005103 2544 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Mmp13P33435 Rasgrp2-201ENSMUST00000035716 2219 ntAPPRIS P1 TSL 2 BASIC17.46■□□□□ 0.39
Mmp13P33435 Dnaaf3-201ENSMUST00000094897 2224 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Mmp13P33435 Nnat-205ENSMUST00000153739 1146 ntAPPRIS ALT1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Mmp13P33435 Gm17035-201ENSMUST00000170557 419 ntTSL 3 BASIC17.46■□□□□ 0.39
Mmp13P33435 Nnat-206ENSMUST00000172487 404 ntTSL 5 BASIC17.46■□□□□ 0.39
Mmp13P33435 Gm10698-201ENSMUST00000182663 604 ntBASIC17.46■□□□□ 0.39
Mmp13P33435 Ddn-201ENSMUST00000075444 3740 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Retrieved 100 of 76,532 protein–RNA pairs in 53 ms