Protein–RNA interactions for Protein: P28704

Rxrb, Retinoic acid receptor RXR-beta, mousemouse

Predictions only

Length 520 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RxrbP28704 Ptpre-201ENSMUST00000073961 5410 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
RxrbP28704 Atp2c1-201ENSMUST00000038118 4876 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
RxrbP28704 Wscd1-203ENSMUST00000108511 2866 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
RxrbP28704 Crocc-201ENSMUST00000040222 6248 ntTSL 5 BASIC17.21■□□□□ 0.35
RxrbP28704 Pnpo-201ENSMUST00000018803 1994 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
RxrbP28704 Fam98b-201ENSMUST00000028825 1861 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
RxrbP28704 Vrk2-201ENSMUST00000078362 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
RxrbP28704 Mmd-202ENSMUST00000107887 1654 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
RxrbP28704 Tm7sf2-202ENSMUST00000113543 1498 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
RxrbP28704 Mir155hg-202ENSMUST00000185662 1362 ntTSL 5 BASIC17.21■□□□□ 0.35
RxrbP28704 Wdr20-205ENSMUST00000193053 1351 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
RxrbP28704 Gm13401-201ENSMUST00000117074 291 ntBASIC17.21■□□□□ 0.35
RxrbP28704 Tecr-203ENSMUST00000165740 1120 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
RxrbP28704 Mcl1-202ENSMUST00000178686 858 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
RxrbP28704 Nfu1-201ENSMUST00000032060 948 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
RxrbP28704 Hist2h2aa2-201ENSMUST00000074976 528 ntAPPRIS P1 BASIC17.21■□□□□ 0.35
RxrbP28704 Hist2h2aa1-201ENSMUST00000078756 586 ntAPPRIS P1 BASIC17.21■□□□□ 0.35
RxrbP28704 Fam171a1-203ENSMUST00000091505 3449 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
RxrbP28704 G3bp2-204ENSMUST00000169094 2716 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
RxrbP28704 Zbtb16-202ENSMUST00000216150 2505 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
RxrbP28704 Mpig6b-201ENSMUST00000097337 2252 ntTSL 1 (best) BASIC17.21■□□□□ 0.34
RxrbP28704 Cxcl12-202ENSMUST00000112866 1878 ntAPPRIS ALT1 TSL 1 (best) BASIC17.2■□□□□ 0.34
RxrbP28704 Gm28372-201ENSMUST00000188900 1876 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
RxrbP28704 Rps6kb2-201ENSMUST00000025749 1864 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
RxrbP28704 Mettl27-204ENSMUST00000111219 1790 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
RxrbP28704 Il3ra-203ENSMUST00000224163 2315 ntAPPRIS P2 BASIC17.2■□□□□ 0.34
RxrbP28704 Spg21-201ENSMUST00000034955 2680 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
RxrbP28704 Slc8b1-202ENSMUST00000076051 2661 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
RxrbP28704 Elf2-202ENSMUST00000091144 2366 ntTSL 5 BASIC17.2■□□□□ 0.34
RxrbP28704 Axin1-202ENSMUST00000118904 2833 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
RxrbP28704 Aunip-201ENSMUST00000105866 1275 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
RxrbP28704 Stxbp3-202ENSMUST00000106596 553 ntTSL 2 BASIC17.2■□□□□ 0.34
RxrbP28704 Speg-206ENSMUST00000122266 917 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
RxrbP28704 Gm26571-201ENSMUST00000181399 666 ntBASIC17.2■□□□□ 0.34
RxrbP28704 Gm7291-201ENSMUST00000199147 382 ntBASIC17.2■□□□□ 0.34
RxrbP28704 Gm42569-201ENSMUST00000200539 472 ntBASIC17.2■□□□□ 0.34
RxrbP28704 Gm26889-201ENSMUST00000181523 2252 ntTSL 5 BASIC17.2■□□□□ 0.34
RxrbP28704 Ly6e-201ENSMUST00000051698 2281 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
RxrbP28704 Ttpal-202ENSMUST00000109408 1999 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
RxrbP28704 Enah-210ENSMUST00000193074 1971 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
RxrbP28704 Pcnx-204ENSMUST00000221721 8318 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
RxrbP28704 Irak1-205ENSMUST00000114353 1896 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
RxrbP28704 Zfp648-201ENSMUST00000086195 1892 ntAPPRIS P1 TSL 3 BASIC17.2■□□□□ 0.34
RxrbP28704 Man1c1-202ENSMUST00000054096 4715 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
RxrbP28704 AC133083.1-201ENSMUST00000221736 2209 ntBASIC17.2■□□□□ 0.34
RxrbP28704 Ssfa2-203ENSMUST00000111788 4976 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
RxrbP28704 Dach1-202ENSMUST00000071533 5219 ntAPPRIS P4 TSL 1 (best) BASIC17.2■□□□□ 0.34
RxrbP28704 Slc35a1-201ENSMUST00000029970 2039 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
RxrbP28704 Usp36-201ENSMUST00000092382 5609 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
RxrbP28704 Fnbp1-205ENSMUST00000113552 1910 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
RxrbP28704 Rrp9-201ENSMUST00000047721 1586 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
RxrbP28704 Tmem150b-202ENSMUST00000086364 2822 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
RxrbP28704 Mst1-204ENSMUST00000162886 2209 ntAPPRIS ALT2 TSL 5 BASIC17.19■□□□□ 0.34
RxrbP28704 2310002F09Rik-201ENSMUST00000181454 1607 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
RxrbP28704 Btnl9-201ENSMUST00000046522 5273 ntAPPRIS P2 TSL 1 (best) BASIC17.19■□□□□ 0.34
RxrbP28704 Dnajc19-204ENSMUST00000120805 551 ntTSL 2 BASIC17.19■□□□□ 0.34
RxrbP28704 4930505A04Rik-201ENSMUST00000041763 904 ntAPPRIS P1 TSL 2 BASIC17.19■□□□□ 0.34
RxrbP28704 Jkamp-201ENSMUST00000057257 1292 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
RxrbP28704 Hspe1-201ENSMUST00000075242 774 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
RxrbP28704 Gnb5-201ENSMUST00000076889 1188 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
RxrbP28704 Tor2a-201ENSMUST00000009707 1536 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
RxrbP28704 Gm9954-202ENSMUST00000198686 4725 ntBASIC17.19■□□□□ 0.34
RxrbP28704 Tatdn2-202ENSMUST00000113022 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
RxrbP28704 1810010K12Rik-201ENSMUST00000070378 1324 ntBASIC17.19■□□□□ 0.34
RxrbP28704 Sprn-201ENSMUST00000059241 3374 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
RxrbP28704 Negr1-203ENSMUST00000106065 1953 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
RxrbP28704 Rhod-202ENSMUST00000117462 1495 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
RxrbP28704 Map4k4-202ENSMUST00000168431 5632 ntAPPRIS ALT2 TSL 5 BASIC17.18■□□□□ 0.34
RxrbP28704 Dhx36-201ENSMUST00000029336 5620 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
RxrbP28704 Arhgap35-201ENSMUST00000075845 9147 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
RxrbP28704 Sbf1-201ENSMUST00000123791 6190 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
RxrbP28704 Atp11a-202ENSMUST00000091237 7443 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
RxrbP28704 Boll-203ENSMUST00000159398 658 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
RxrbP28704 Mir2861-201ENSMUST00000175539 82 ntBASIC17.18■□□□□ 0.34
RxrbP28704 Gm29458-201ENSMUST00000187093 354 ntTSL 3 BASIC17.18■□□□□ 0.34
RxrbP28704 Slc37a3-211ENSMUST00000202749 434 ntTSL 5 BASIC17.18■□□□□ 0.34
RxrbP28704 Gm44899-202ENSMUST00000209433 511 ntTSL 5 BASIC17.18■□□□□ 0.34
RxrbP28704 AC133650.2-201ENSMUST00000217036 607 ntTSL 3 BASIC17.18■□□□□ 0.34
RxrbP28704 D930007J09Rik-201ENSMUST00000057911 393 ntAPPRIS P1 BASIC17.18■□□□□ 0.34
RxrbP28704 L3hypdh-201ENSMUST00000019862 1831 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
RxrbP28704 Atp5d-203ENSMUST00000105367 1410 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
RxrbP28704 Prpf40b-212ENSMUST00000145482 3308 ntAPPRIS P2 TSL 1 (best) BASIC17.18■□□□□ 0.34
RxrbP28704 Pola2-202ENSMUST00000165143 2397 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
RxrbP28704 Fiz1-201ENSMUST00000077385 2546 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
RxrbP28704 Prkab1-202ENSMUST00000111999 2026 ntAPPRIS P1 TSL 2 BASIC17.18■□□□□ 0.34
RxrbP28704 Fgfr2-215ENSMUST00000122054 3323 ntAPPRIS P4 TSL 1 (best) BASIC17.18■□□□□ 0.34
RxrbP28704 Hnrnpa1-202ENSMUST00000087351 1759 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
RxrbP28704 Bend4-204ENSMUST00000201972 8268 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
RxrbP28704 Dynlt1c-201ENSMUST00000092966 2589 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
RxrbP28704 Fam185a-201ENSMUST00000056045 3027 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
RxrbP28704 1700030C12Rik-201ENSMUST00000101462 858 ntTSL 5 BASIC17.17■□□□□ 0.34
RxrbP28704 Gm2399-201ENSMUST00000104944 225 ntBASIC17.17■□□□□ 0.34
RxrbP28704 Dcaf17-203ENSMUST00000112159 2490 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
RxrbP28704 Gm15298-201ENSMUST00000145916 1212 ntTSL 5 BASIC17.17■□□□□ 0.34
RxrbP28704 Iqsec2-207ENSMUST00000168786 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
RxrbP28704 Pid1-201ENSMUST00000168574 2664 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
RxrbP28704 Trappc5-201ENSMUST00000044857 2546 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
RxrbP28704 AK157302-201ENSMUST00000104942 1924 ntAPPRIS P1 BASIC17.17■□□□□ 0.34
RxrbP28704 Hace1-201ENSMUST00000037044 3785 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
RxrbP28704 Nipa2-201ENSMUST00000032635 3197 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Retrieved 100 of 76,532 protein–RNA pairs in 19.9 ms