Protein–RNA interactions for Protein: P02088

Hbb-b1, Hemoglobin subunit beta-1, mousemouse

Predictions only

Length 147 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hbb-b1P02088 Rgs3-201ENSMUST00000065870 4698 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Hbb-b1P02088 Fbxl3-206ENSMUST00000145693 3352 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Hbb-b1P02088 Wnt8b-201ENSMUST00000041163 3376 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Hbb-b1P02088 Gm10209-201ENSMUST00000203397 1607 ntBASIC12.13□□□□□ -0.47
Hbb-b1P02088 Eif4e2-204ENSMUST00000113231 1119 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Hbb-b1P02088 Gng12-203ENSMUST00000114224 680 ntAPPRIS P1 TSL 3 BASIC12.13□□□□□ -0.47
Hbb-b1P02088 Gm11175-201ENSMUST00000116172 543 ntBASIC12.13□□□□□ -0.47
Hbb-b1P02088 Rps14-202ENSMUST00000118551 602 ntAPPRIS P1 TSL 2 BASIC12.13□□□□□ -0.47
Hbb-b1P02088 Gm14486-201ENSMUST00000144704 644 ntTSL 3 BASIC12.13□□□□□ -0.47
Hbb-b1P02088 B230208B08Rik-201ENSMUST00000173049 404 ntTSL 3 BASIC12.13□□□□□ -0.47
Hbb-b1P02088 A730098A19Rik-201ENSMUST00000188193 978 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Hbb-b1P02088 Tox2-201ENSMUST00000099110 2166 ntAPPRIS ALT2 TSL 5 BASIC12.13□□□□□ -0.47
Hbb-b1P02088 Hnrnpul1-205ENSMUST00000206832 3784 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Hbb-b1P02088 Mcoln2-202ENSMUST00000098524 2492 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Hbb-b1P02088 Gm16011-201ENSMUST00000121567 2662 ntBASIC12.13□□□□□ -0.47
Hbb-b1P02088 Yes1-205ENSMUST00000202543 2657 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Hbb-b1P02088 Pacsin2-203ENSMUST00000171436 3693 ntAPPRIS P1 TSL 5 BASIC12.13□□□□□ -0.47
Hbb-b1P02088 Ddi2-201ENSMUST00000102484 9553 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Hbb-b1P02088 Usp27x-201ENSMUST00000115744 3240 ntAPPRIS P1 BASIC12.13□□□□□ -0.47
Hbb-b1P02088 Adgrb2-208ENSMUST00000121049 4871 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Hbb-b1P02088 Gdf5-201ENSMUST00000040162 2320 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Hbb-b1P02088 Runx2-213ENSMUST00000162878 2987 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Hbb-b1P02088 Mff-212ENSMUST00000162003 2087 ntTSL 5 BASIC12.12□□□□□ -0.47
Hbb-b1P02088 Tuba8-201ENSMUST00000032233 2263 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Hbb-b1P02088 Pcdha4-202ENSMUST00000192512 5363 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Hbb-b1P02088 Wwc2-201ENSMUST00000057561 8678 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Hbb-b1P02088 Wee1-201ENSMUST00000033326 3419 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Hbb-b1P02088 Otp-201ENSMUST00000022195 2656 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Hbb-b1P02088 Erf-202ENSMUST00000116343 690 ntAPPRIS ALT2 TSL 2 BASIC12.12□□□□□ -0.47
Hbb-b1P02088 Gm11713-201ENSMUST00000139941 523 ntTSL 3 BASIC12.12□□□□□ -0.47
Hbb-b1P02088 Ppp1r18os-201ENSMUST00000145804 784 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Hbb-b1P02088 Ybx2-205ENSMUST00000149194 1235 ntTSL 5 BASIC12.12□□□□□ -0.47
Hbb-b1P02088 Taf5l-202ENSMUST00000165628 2973 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Hbb-b1P02088 Zfp109-203ENSMUST00000206960 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Hbb-b1P02088 Fcho1-209ENSMUST00000146100 3188 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Hbb-b1P02088 Nlk-201ENSMUST00000142739 4444 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Hbb-b1P02088 Galnt18-202ENSMUST00000106663 2530 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Hbb-b1P02088 Napa-201ENSMUST00000006181 2517 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Hbb-b1P02088 E330009J07Rik-202ENSMUST00000101492 6742 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Hbb-b1P02088 Dlg5-202ENSMUST00000073687 7784 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Hbb-b1P02088 Esx1-202ENSMUST00000113066 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Hbb-b1P02088 Asph-210ENSMUST00000108337 2836 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Hbb-b1P02088 Pcdha7-201ENSMUST00000192631 5337 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Hbb-b1P02088 Rassf1-202ENSMUST00000093786 1787 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Hbb-b1P02088 Prdm11-201ENSMUST00000111272 3012 ntAPPRIS P1 TSL 5 BASIC12.12□□□□□ -0.47
Hbb-b1P02088 Chd4-201ENSMUST00000056889 6697 ntAPPRIS P2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Hbb-b1P02088 Cnksr1-201ENSMUST00000030645 2468 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Hbb-b1P02088 Itgb7-201ENSMUST00000001327 2674 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Hbb-b1P02088 Tcf3-209ENSMUST00000105345 2950 ntAPPRIS P3 TSL 1 (best) BASIC12.12□□□□□ -0.47
Hbb-b1P02088 Hmg20b-201ENSMUST00000020454 1621 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Hbb-b1P02088 1700034J05Rik-202ENSMUST00000111622 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Hbb-b1P02088 Aifm1-202ENSMUST00000114945 2221 ntAPPRIS ALT2 TSL 5 BASIC12.11□□□□□ -0.47
Hbb-b1P02088 Htatsf1-201ENSMUST00000088652 2810 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Hbb-b1P02088 Nrg2-203ENSMUST00000115713 3001 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
Hbb-b1P02088 Hnrnpll-201ENSMUST00000061331 3116 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
Hbb-b1P02088 Gm10564-201ENSMUST00000097750 3113 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Hbb-b1P02088 Sec31a-201ENSMUST00000094578 4228 ntAPPRIS P2 TSL 5 BASIC12.11□□□□□ -0.47
Hbb-b1P02088 2010007H06Rik-202ENSMUST00000186025 4934 ntTSL 2 BASIC12.11□□□□□ -0.47
Hbb-b1P02088 Ppp1r2-201ENSMUST00000060188 4078 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Hbb-b1P02088 Gata5-201ENSMUST00000015771 3277 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Hbb-b1P02088 Plxnb1-201ENSMUST00000072093 8649 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Hbb-b1P02088 Tpm3-202ENSMUST00000118566 2190 ntTSL 5 BASIC12.11□□□□□ -0.47
Hbb-b1P02088 Pigz-201ENSMUST00000052174 2184 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Hbb-b1P02088 Hira-202ENSMUST00000120532 2063 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Hbb-b1P02088 Rgs3-203ENSMUST00000098031 2072 ntAPPRIS ALT1 TSL 5 BASIC12.11□□□□□ -0.47
Hbb-b1P02088 Aurkb-201ENSMUST00000021277 1950 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Hbb-b1P02088 4930412F12Rik-201ENSMUST00000211700 1471 ntBASIC12.11□□□□□ -0.47
Hbb-b1P02088 Slc35a2-209ENSMUST00000208397 1374 ntAPPRIS ALT2 TSL 5 BASIC12.11□□□□□ -0.47
Hbb-b1P02088 Zfp629-208ENSMUST00000151107 583 ntTSL 3 BASIC12.11□□□□□ -0.47
Hbb-b1P02088 Fam89b-203ENSMUST00000161368 1160 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Hbb-b1P02088 Tm2d2-201ENSMUST00000033961 1281 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Hbb-b1P02088 Rras-201ENSMUST00000044111 995 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Hbb-b1P02088 Sesn1-202ENSMUST00000099931 3809 ntAPPRIS ALT1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Hbb-b1P02088 Zfp334-201ENSMUST00000103084 8205 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Hbb-b1P02088 Slc25a23-201ENSMUST00000040280 3362 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Hbb-b1P02088 Tlnrd1-201ENSMUST00000094216 4433 ntAPPRIS P1 BASIC12.11□□□□□ -0.47
Hbb-b1P02088 Rbm15-201ENSMUST00000061772 4343 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Hbb-b1P02088 A530016L24Rik-202ENSMUST00000223266 1547 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Hbb-b1P02088 Btaf1-201ENSMUST00000099494 7204 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Hbb-b1P02088 Itpkc-201ENSMUST00000003850 3247 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Hbb-b1P02088 Gm26889-201ENSMUST00000181523 2252 ntTSL 5 BASIC12.11□□□□□ -0.47
Hbb-b1P02088 Mcub-201ENSMUST00000029624 1318 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Hbb-b1P02088 Pqlc1-202ENSMUST00000091798 1989 ntAPPRIS P3 TSL 5 BASIC12.1□□□□□ -0.47
Hbb-b1P02088 Cdc42ep1-201ENSMUST00000059619 2542 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Hbb-b1P02088 B4galt3-205ENSMUST00000126699 1758 ntTSL 5 BASIC12.1□□□□□ -0.47
Hbb-b1P02088 Stx6-201ENSMUST00000027743 4589 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Hbb-b1P02088 Nfkbie-201ENSMUST00000024742 2422 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Hbb-b1P02088 Nsun5-201ENSMUST00000000940 2243 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Hbb-b1P02088 Tor3a-208ENSMUST00000190607 453 ntTSL 3 BASIC12.1□□□□□ -0.47
Hbb-b1P02088 Gm11175-202ENSMUST00000211380 408 ntTSL 3 BASIC12.1□□□□□ -0.47
Hbb-b1P02088 Mcrip2-201ENSMUST00000026828 816 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Hbb-b1P02088 Gar1-201ENSMUST00000029643 1271 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Hbb-b1P02088 Rabac1-201ENSMUST00000076961 899 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Hbb-b1P02088 Smarcd3-208ENSMUST00000195943 1712 ntTSL 5 BASIC12.1□□□□□ -0.47
Hbb-b1P02088 Smarcd3-201ENSMUST00000030791 1735 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Hbb-b1P02088 Fbxo30-202ENSMUST00000129456 5060 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Hbb-b1P02088 Gas2-201ENSMUST00000051912 2181 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Hbb-b1P02088 Chrm3-202ENSMUST00000187510 4336 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Hbb-b1P02088 Dgkq-201ENSMUST00000053913 4938 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Hbb-b1P02088 Hnrnpl-202ENSMUST00000172529 1898 ntTSL 5 BASIC12.1□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 29.5 ms