Protein–RNA interactions for Protein: O89116

Vti1a, Vesicle transport through interaction with t-SNAREs homolog 1A, mousemouse

Predictions only

Length 217 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vti1aO89116 Rogdi-207ENSMUST00000202281 1355 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Vti1aO89116 Uhmk1-201ENSMUST00000027979 7864 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Vti1aO89116 Nkiras2-201ENSMUST00000017981 2097 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Vti1aO89116 4930426D05Rik-202ENSMUST00000139804 1650 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Vti1aO89116 Il17re-203ENSMUST00000101065 1973 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Vti1aO89116 9930012K11Rik-201ENSMUST00000058240 1986 ntAPPRIS P3 TSL 1 (best) BASIC18.45■□□□□ 0.54
Vti1aO89116 5330438I03Rik-201ENSMUST00000168347 2845 ntBASIC18.45■□□□□ 0.54
Vti1aO89116 Gm24841-201ENSMUST00000158676 357 ntBASIC18.45■□□□□ 0.54
Vti1aO89116 Hist1h2br-203ENSMUST00000180288 1256 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Vti1aO89116 Gm7791-201ENSMUST00000219066 539 ntBASIC18.45■□□□□ 0.54
Vti1aO89116 Gng11-201ENSMUST00000031670 919 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Vti1aO89116 Hoxa6-201ENSMUST00000062829 874 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Vti1aO89116 Hist1h2bq-202ENSMUST00000091749 1254 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Vti1aO89116 Fam131a-202ENSMUST00000118919 2262 ntTSL 5 BASIC18.45■□□□□ 0.54
Vti1aO89116 Zfp689-202ENSMUST00000106299 1417 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Vti1aO89116 Dlgap1-209ENSMUST00000140728 2173 ntAPPRIS ALT2 TSL 5 BASIC18.45■□□□□ 0.54
Vti1aO89116 Fkbp5-201ENSMUST00000079413 3542 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Vti1aO89116 Alcam-201ENSMUST00000023312 6036 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Vti1aO89116 Nit1-202ENSMUST00000111295 1335 ntAPPRIS P3 TSL 1 (best) BASIC18.45■□□□□ 0.54
Vti1aO89116 Pigu-201ENSMUST00000077626 1636 ntAPPRIS P2 TSL 1 (best) BASIC18.45■□□□□ 0.54
Vti1aO89116 Ing1-207ENSMUST00000211007 2241 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Vti1aO89116 Phldb3-201ENSMUST00000073325 2273 ntAPPRIS P1 TSL 5 BASIC18.44■□□□□ 0.54
Vti1aO89116 Klf13-201ENSMUST00000063694 6396 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Vti1aO89116 Plxnd1-201ENSMUST00000015511 6907 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Vti1aO89116 Vps4a-201ENSMUST00000034388 2178 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Vti1aO89116 Mapre3-201ENSMUST00000031058 2021 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Vti1aO89116 Agap3-205ENSMUST00000199856 2685 ntTSL 5 BASIC18.44■□□□□ 0.54
Vti1aO89116 Edem1-201ENSMUST00000089162 5817 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Vti1aO89116 Foxo3-204ENSMUST00000175881 2535 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Vti1aO89116 Syngap1-204ENSMUST00000194598 6011 ntAPPRIS P2 TSL 5 BASIC18.44■□□□□ 0.54
Vti1aO89116 Gm13420-201ENSMUST00000129574 1091 ntAPPRIS P1 TSL 5 BASIC18.44■□□□□ 0.54
Vti1aO89116 Zfp629-206ENSMUST00000132524 215 ntTSL 5 BASIC18.44■□□□□ 0.54
Vti1aO89116 D330023K18Rik-201ENSMUST00000133550 920 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Vti1aO89116 Smim12-201ENSMUST00000142029 1022 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Vti1aO89116 Nkx2-6-201ENSMUST00000062437 1134 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Vti1aO89116 Pitx2-207ENSMUST00000174661 1942 ntAPPRIS P3 TSL 1 (best) BASIC18.44■□□□□ 0.54
Vti1aO89116 Ebf3-204ENSMUST00000169486 4994 ntAPPRIS ALT1 TSL 5 BASIC18.44■□□□□ 0.54
Vti1aO89116 Ankrd22-201ENSMUST00000025686 1766 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Vti1aO89116 Zic1-201ENSMUST00000034927 5606 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Vti1aO89116 Mpdu1-201ENSMUST00000018905 1321 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Vti1aO89116 Ino80e-202ENSMUST00000106342 1840 ntTSL 3 BASIC18.44■□□□□ 0.54
Vti1aO89116 Fam98a-201ENSMUST00000112507 2817 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Vti1aO89116 Clasp2-204ENSMUST00000213663 2727 ntTSL 5 BASIC18.43■□□□□ 0.54
Vti1aO89116 Ubr3-202ENSMUST00000112251 8081 ntAPPRIS ALT2 TSL 5 BASIC18.43■□□□□ 0.54
Vti1aO89116 Cdh2-201ENSMUST00000025166 4843 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Vti1aO89116 Apaf1-208ENSMUST00000162618 5151 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
Vti1aO89116 Hirip3-201ENSMUST00000037248 2766 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Vti1aO89116 Hspbp1-201ENSMUST00000079970 1593 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Vti1aO89116 Ptpra-201ENSMUST00000028769 3227 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Vti1aO89116 Hist1h2bf-201ENSMUST00000105106 461 ntAPPRIS P1 BASIC18.43■□□□□ 0.54
Vti1aO89116 Gm13401-201ENSMUST00000117074 291 ntBASIC18.43■□□□□ 0.54
Vti1aO89116 Gm14453-201ENSMUST00000139677 553 ntTSL 3 BASIC18.43■□□□□ 0.54
Vti1aO89116 Gm12781-201ENSMUST00000146269 395 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Vti1aO89116 Gm27389-201ENSMUST00000183622 195 ntBASIC18.43■□□□□ 0.54
Vti1aO89116 Ttc32-203ENSMUST00000219488 768 ntTSL 3 BASIC18.43■□□□□ 0.54
Vti1aO89116 4930505A04Rik-201ENSMUST00000041763 904 ntAPPRIS P1 TSL 2 BASIC18.43■□□□□ 0.54
Vti1aO89116 Odf2-211ENSMUST00000113767 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
Vti1aO89116 Tmem196-201ENSMUST00000058644 1678 ntAPPRIS P1 TSL 5 BASIC18.43■□□□□ 0.54
Vti1aO89116 Slc9a5-201ENSMUST00000073149 3499 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Vti1aO89116 Gm17484-201ENSMUST00000167899 2322 ntTSL 2 BASIC18.43■□□□□ 0.54
Vti1aO89116 Cacnb1-204ENSMUST00000107561 1778 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Vti1aO89116 Timm17b-201ENSMUST00000033498 2381 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Vti1aO89116 Nespas-203ENSMUST00000151472 2248 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Vti1aO89116 Gtf3a-201ENSMUST00000132102 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
Vti1aO89116 Mpig6b-201ENSMUST00000097337 2252 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Vti1aO89116 Ctdsp2-202ENSMUST00000105256 4817 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Vti1aO89116 Pdcd5-202ENSMUST00000120714 767 ntTSL 3 BASIC18.42■□□□□ 0.54
Vti1aO89116 Mipol1-201ENSMUST00000123498 2117 ntAPPRIS ALT2 TSL 5 BASIC18.42■□□□□ 0.54
Vti1aO89116 Gm15545-202ENSMUST00000141011 899 ntTSL 3 BASIC18.42■□□□□ 0.54
Vti1aO89116 Tppp3-202ENSMUST00000176419 719 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Vti1aO89116 Rgcc-201ENSMUST00000022595 918 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Vti1aO89116 Rplp2-201ENSMUST00000084434 964 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Vti1aO89116 Sqstm1-201ENSMUST00000015981 2673 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Vti1aO89116 Klhl42-201ENSMUST00000036003 6267 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Vti1aO89116 Gm13032-201ENSMUST00000151848 2001 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Vti1aO89116 Cyth2-201ENSMUST00000056820 2527 ntAPPRIS ALT1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Vti1aO89116 Dpy19l1-203ENSMUST00000142064 3489 ntAPPRIS P1 TSL 5 BASIC18.42■□□□□ 0.54
Vti1aO89116 Gm6093-201ENSMUST00000221792 1623 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Vti1aO89116 Iqgap2-201ENSMUST00000068603 5771 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Vti1aO89116 Adnp-202ENSMUST00000088001 4932 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Vti1aO89116 4930503L19Rik-201ENSMUST00000067556 2291 ntAPPRIS P2 TSL 1 (best) BASIC18.41■□□□□ 0.54
Vti1aO89116 Snx3-202ENSMUST00000105499 1057 ntTSL 5 BASIC18.41■□□□□ 0.54
Vti1aO89116 H2-Q6-201ENSMUST00000113879 981 ntAPPRIS P1 TSL 2 BASIC18.41■□□□□ 0.54
Vti1aO89116 Cenps-207ENSMUST00000177408 689 ntTSL 2 BASIC18.41■□□□□ 0.54
Vti1aO89116 Gm27741-201ENSMUST00000185060 237 ntBASIC18.41■□□□□ 0.54
Vti1aO89116 Gm29791-202ENSMUST00000207888 369 ntBASIC18.41■□□□□ 0.54
Vti1aO89116 Il17a-201ENSMUST00000027061 1171 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Vti1aO89116 BC048679-201ENSMUST00000073406 522 ntAPPRIS P3 TSL 1 (best) BASIC18.41■□□□□ 0.54
Vti1aO89116 Etnk1-204ENSMUST00000205256 2647 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Vti1aO89116 Nagk-203ENSMUST00000113851 1323 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Vti1aO89116 Dscc1-201ENSMUST00000023059 1324 ntAPPRIS P2 TSL 1 (best) BASIC18.41■□□□□ 0.54
Vti1aO89116 Tbc1d2b-202ENSMUST00000128874 3473 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Vti1aO89116 Vkorc1l1-203ENSMUST00000201855 4809 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Vti1aO89116 Map4k5-210ENSMUST00000171211 4334 ntTSL 2 BASIC18.41■□□□□ 0.54
Vti1aO89116 Ocel1-202ENSMUST00000110051 2179 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Vti1aO89116 Fam149b-216ENSMUST00000225942 2151 ntAPPRIS ALT2 BASIC18.41■□□□□ 0.54
Vti1aO89116 Thumpd3-201ENSMUST00000032398 2163 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Vti1aO89116 Nptn-212ENSMUST00000177292 1390 ntAPPRIS P1 TSL 5 BASIC18.41■□□□□ 0.54
Vti1aO89116 Gm29514-202ENSMUST00000186665 2214 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Vti1aO89116 Csf3-201ENSMUST00000038886 1413 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Retrieved 100 of 76,532 protein–RNA pairs in 19.5 ms