Protein–RNA interactions for Protein: O35526

Stx1a, Syntaxin-1A, mousemouse

Predictions only

Length 288 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Stx1aO35526 Vrk2-201ENSMUST00000078362 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Stx1aO35526 Hps6-201ENSMUST00000099393 2696 ntAPPRIS P1 BASIC19.26■□□□□ 0.67
Stx1aO35526 Ccdc88a-201ENSMUST00000040182 9376 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
Stx1aO35526 Tnfsf13-201ENSMUST00000018896 1407 ntAPPRIS P2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Stx1aO35526 Sharpin-201ENSMUST00000023211 1734 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Stx1aO35526 Ptgis-201ENSMUST00000018113 2107 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Stx1aO35526 1700066B19Rik-201ENSMUST00000097617 2504 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Stx1aO35526 Gabra5-202ENSMUST00000206382 2607 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
Stx1aO35526 Tbx18-201ENSMUST00000034991 4679 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Stx1aO35526 Pld2-203ENSMUST00000108557 3655 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Stx1aO35526 Dtx2-201ENSMUST00000005072 2562 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
Stx1aO35526 Atp6v1c1-201ENSMUST00000022904 2071 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Stx1aO35526 Aldh2-202ENSMUST00000129753 1799 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Stx1aO35526 Tmem203-201ENSMUST00000104998 854 ntAPPRIS P1 BASIC19.25■□□□□ 0.67
Stx1aO35526 Gm26571-201ENSMUST00000181399 666 ntBASIC19.25■□□□□ 0.67
Stx1aO35526 Gm19391-201ENSMUST00000196653 999 ntTSL 3 BASIC19.25■□□□□ 0.67
Stx1aO35526 Rpl18a-206ENSMUST00000212709 700 ntTSL 2 BASIC19.25■□□□□ 0.67
Stx1aO35526 Izumo2-201ENSMUST00000085422 632 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Stx1aO35526 Gm26917-202ENSMUST00000192833 3329 ntBASIC19.25■□□□□ 0.67
Stx1aO35526 Fcho1-209ENSMUST00000146100 3188 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Stx1aO35526 Qprt-201ENSMUST00000032912 2050 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Stx1aO35526 Glt28d2-201ENSMUST00000033643 2732 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Stx1aO35526 Sh2b3-201ENSMUST00000040308 2530 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
Stx1aO35526 Gpc3-201ENSMUST00000069360 2216 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Stx1aO35526 Alcam-201ENSMUST00000023312 6036 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Stx1aO35526 Nipsnap1-201ENSMUST00000038570 1926 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Stx1aO35526 Chtf8-206ENSMUST00000177068 2931 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Stx1aO35526 Cracr2b-207ENSMUST00000170879 1158 ntAPPRIS ALT2 TSL 5 BASIC19.24■□□□□ 0.67
Stx1aO35526 Apoe-205ENSMUST00000173739 1221 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Stx1aO35526 Apoe-209ENSMUST00000174355 1104 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
Stx1aO35526 Apoe-201ENSMUST00000003066 1128 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
Stx1aO35526 Tmem270-201ENSMUST00000047305 932 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Stx1aO35526 Smn1-202ENSMUST00000091321 223 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Stx1aO35526 Plekhf1-201ENSMUST00000098513 5263 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Stx1aO35526 Gata6-201ENSMUST00000047762 3194 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Stx1aO35526 Npas3-201ENSMUST00000101432 5879 ntAPPRIS P2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Stx1aO35526 2310002F09Rik-201ENSMUST00000181454 1607 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Stx1aO35526 Ngb-201ENSMUST00000021420 1616 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
Stx1aO35526 Dtx2-203ENSMUST00000111144 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Stx1aO35526 Dpep3-201ENSMUST00000034371 1698 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Stx1aO35526 Tnfrsf13c-201ENSMUST00000089161 1906 ntAPPRIS P2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Stx1aO35526 Ebf1-203ENSMUST00000109268 2864 ntAPPRIS ALT1 TSL 5 BASIC19.23■□□□□ 0.67
Stx1aO35526 Ntng1-207ENSMUST00000131027 1485 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Stx1aO35526 Ntng1-209ENSMUST00000138344 1452 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Stx1aO35526 Zkscan14-201ENSMUST00000031632 1967 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Stx1aO35526 Bhlhb9-201ENSMUST00000068755 2823 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Stx1aO35526 Large2-215ENSMUST00000176810 2477 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
Stx1aO35526 Gm5901-201ENSMUST00000106805 1140 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
Stx1aO35526 Speg-206ENSMUST00000122266 917 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Stx1aO35526 Gm6576-201ENSMUST00000169678 883 ntBASIC19.23■□□□□ 0.67
Stx1aO35526 Coro1a-209ENSMUST00000173108 1170 ntTSL 5 BASIC19.23■□□□□ 0.67
Stx1aO35526 Hsbp1-202ENSMUST00000212468 638 ntAPPRIS P1 TSL 2 BASIC19.23■□□□□ 0.67
Stx1aO35526 Tbc1d7-201ENSMUST00000021797 1239 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Stx1aO35526 Cebpg-201ENSMUST00000070191 914 ntAPPRIS P1 TSL 2 BASIC19.23■□□□□ 0.67
Stx1aO35526 Gm36858-201ENSMUST00000194501 2391 ntBASIC19.23■□□□□ 0.67
Stx1aO35526 Tmem131l-201ENSMUST00000052342 4815 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
Stx1aO35526 Zdhhc2-201ENSMUST00000049389 3381 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Stx1aO35526 Nploc4-202ENSMUST00000103017 4025 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Stx1aO35526 Btbd11-203ENSMUST00000105307 5788 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
Stx1aO35526 Zfp326-201ENSMUST00000031227 2667 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Stx1aO35526 Pnpt1-201ENSMUST00000020756 2707 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Stx1aO35526 Csk-201ENSMUST00000034863 2749 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Stx1aO35526 Slc16a3-202ENSMUST00000100130 2386 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Stx1aO35526 Rhot1-201ENSMUST00000017831 3029 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Stx1aO35526 Hoxc4-202ENSMUST00000165375 2121 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Stx1aO35526 Mmp17-201ENSMUST00000031390 6422 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Stx1aO35526 Csrp2-201ENSMUST00000020403 1384 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Stx1aO35526 Stxbp3-205ENSMUST00000138552 1789 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Stx1aO35526 Cadps2-212ENSMUST00000163871 4969 ntAPPRIS ALT2 TSL 5 BASIC19.22■□□□□ 0.67
Stx1aO35526 Nsmf-207ENSMUST00000116574 2863 ntTSL 5 BASIC19.22■□□□□ 0.67
Stx1aO35526 Dclk2-208ENSMUST00000194452 2066 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Stx1aO35526 Ankrd17-203ENSMUST00000168058 9311 ntAPPRIS ALT2 TSL 5 BASIC19.22■□□□□ 0.67
Stx1aO35526 Stmn4-203ENSMUST00000120229 1281 ntTSL 2 BASIC19.22■□□□□ 0.67
Stx1aO35526 Gm15298-201ENSMUST00000145916 1212 ntTSL 5 BASIC19.22■□□□□ 0.67
Stx1aO35526 Gm10138-203ENSMUST00000206952 366 ntBASIC19.22■□□□□ 0.67
Stx1aO35526 Jkamp-201ENSMUST00000057257 1292 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
Stx1aO35526 Bicdl1-201ENSMUST00000055408 3026 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Stx1aO35526 Enoph1-202ENSMUST00000169390 1833 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Stx1aO35526 Rnf38-203ENSMUST00000102934 5240 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
Stx1aO35526 Ubfd1-201ENSMUST00000033158 4849 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Stx1aO35526 Ino80e-203ENSMUST00000106343 1973 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Stx1aO35526 Sh2b1-202ENSMUST00000205340 3366 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Stx1aO35526 Nox4-202ENSMUST00000068829 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Stx1aO35526 Ints8-201ENSMUST00000044616 3433 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Stx1aO35526 Ptges2-201ENSMUST00000028162 4978 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Stx1aO35526 Kcmf1-201ENSMUST00000068697 3251 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Stx1aO35526 Nosip-201ENSMUST00000003513 1814 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
Stx1aO35526 Matn4-201ENSMUST00000103103 2304 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Stx1aO35526 Unc13b-203ENSMUST00000107953 5034 ntAPPRIS ALT2 TSL 5 BASIC19.21■□□□□ 0.67
Stx1aO35526 Hsp25-ps1-201ENSMUST00000109187 630 ntBASIC19.21■□□□□ 0.67
Stx1aO35526 Gm11527-201ENSMUST00000153795 596 ntTSL 2 BASIC19.21■□□□□ 0.67
Stx1aO35526 Gm3764-202ENSMUST00000180582 440 ntTSL 5 BASIC19.21■□□□□ 0.67
Stx1aO35526 Uts2r-201ENSMUST00000039044 1703 ntAPPRIS P1 BASIC19.21■□□□□ 0.67
Stx1aO35526 Tpsb2-201ENSMUST00000069616 1081 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Stx1aO35526 Rbck1-202ENSMUST00000109847 2384 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Stx1aO35526 Kctd1-202ENSMUST00000168989 3456 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Stx1aO35526 Shc1-202ENSMUST00000094378 2617 ntAPPRIS ALT1 TSL 1 (best) BASIC19.21■□□□□ 0.66
Stx1aO35526 Ankrd13b-201ENSMUST00000037593 3105 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Stx1aO35526 Kcnq5-203ENSMUST00000115300 6975 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Stx1aO35526 Carmil2-201ENSMUST00000062574 2526 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Retrieved 100 of 76,532 protein–RNA pairs in 20.8 ms