Protein–RNA interactions for Protein: J3QNG1

Gm6408, Predicted gene 6408, mousemouse

Predictions only

Length 320 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm6408J3QNG1 Dnajc19-201ENSMUST00000011029 2499 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Gm6408J3QNG1 Mta1-201ENSMUST00000009099 2826 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
Gm6408J3QNG1 Cux1-206ENSMUST00000176172 4882 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Gm6408J3QNG1 Cadps2-212ENSMUST00000163871 4969 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
Gm6408J3QNG1 Atp8a1-204ENSMUST00000113652 854 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Gm6408J3QNG1 Mrps10-204ENSMUST00000120737 1017 ntAPPRIS ALT1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Gm6408J3QNG1 D330023K18Rik-201ENSMUST00000133550 920 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Gm6408J3QNG1 Gm28914-201ENSMUST00000188115 667 ntTSL 2 BASIC17.09■□□□□ 0.33
Gm6408J3QNG1 Gm37856-201ENSMUST00000191634 999 ntBASIC17.09■□□□□ 0.33
Gm6408J3QNG1 1600023N17Rik-201ENSMUST00000196242 1007 ntBASIC17.09■□□□□ 0.33
Gm6408J3QNG1 Gm4974-201ENSMUST00000209974 875 ntBASIC17.09■□□□□ 0.33
Gm6408J3QNG1 H2-Eb1-201ENSMUST00000074557 1184 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Gm6408J3QNG1 Fbxl15-201ENSMUST00000026256 1348 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Gm6408J3QNG1 Cldn5-201ENSMUST00000043577 1414 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
Gm6408J3QNG1 Rpf1-201ENSMUST00000029838 1661 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Gm6408J3QNG1 Irgc1-204ENSMUST00000205776 1835 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Gm6408J3QNG1 Sars2-201ENSMUST00000094632 1868 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Gm6408J3QNG1 Ptprt-201ENSMUST00000109441 6623 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Gm6408J3QNG1 Slc47a1-201ENSMUST00000010267 2639 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
Gm6408J3QNG1 Usp49-201ENSMUST00000024779 8252 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Gm6408J3QNG1 Cdv3-207ENSMUST00000190226 3107 ntTSL 5 BASIC17.09■□□□□ 0.33
Gm6408J3QNG1 Dag1-201ENSMUST00000080435 4364 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Gm6408J3QNG1 Ccdc88a-201ENSMUST00000040182 9376 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.33
Gm6408J3QNG1 Atg4c-201ENSMUST00000030279 3178 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Gm6408J3QNG1 Tmem163-203ENSMUST00000160616 2657 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.33
Gm6408J3QNG1 Gm43548-201ENSMUST00000197139 2353 ntBASIC17.08■□□□□ 0.33
Gm6408J3QNG1 Alcam-201ENSMUST00000023312 6036 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Gm6408J3QNG1 Spdef-205ENSMUST00000167489 1708 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.32
Gm6408J3QNG1 Eva1c-202ENSMUST00000099543 1554 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Gm6408J3QNG1 Mink1-202ENSMUST00000072873 4610 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.32
Gm6408J3QNG1 Tm7sf2-202ENSMUST00000113543 1498 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Gm6408J3QNG1 Nrn1-203ENSMUST00000223611 1443 ntBASIC17.08■□□□□ 0.32
Gm6408J3QNG1 Ssu72-202ENSMUST00000105595 874 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Gm6408J3QNG1 Gm12527-201ENSMUST00000117967 564 ntBASIC17.08■□□□□ 0.32
Gm6408J3QNG1 Spata3-208ENSMUST00000149469 1110 ntTSL 5 BASIC17.08■□□□□ 0.32
Gm6408J3QNG1 Trmt13-210ENSMUST00000198454 880 ntBASIC17.08■□□□□ 0.32
Gm6408J3QNG1 Atp5c1-201ENSMUST00000026887 1060 ntAPPRIS ALT1 TSL 5 BASIC17.08■□□□□ 0.32
Gm6408J3QNG1 Ube2s-201ENSMUST00000079496 1238 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Gm6408J3QNG1 Gsk3b-201ENSMUST00000023507 8303 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.32
Gm6408J3QNG1 Crebzf-201ENSMUST00000061767 3376 ntAPPRIS P1 BASIC17.08■□□□□ 0.32
Gm6408J3QNG1 Chka-202ENSMUST00000072055 2549 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.32
Gm6408J3QNG1 Cdv3-202ENSMUST00000072249 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Gm6408J3QNG1 Adnp-202ENSMUST00000088001 4932 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Gm6408J3QNG1 Car9-201ENSMUST00000030183 2023 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Gm6408J3QNG1 Cdc42ep3-201ENSMUST00000068958 1967 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Gm6408J3QNG1 Cct6b-201ENSMUST00000021040 1787 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Gm6408J3QNG1 Plppr5-202ENSMUST00000106473 4294 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Gm6408J3QNG1 Cpox-201ENSMUST00000060077 3186 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Gm6408J3QNG1 Cdc14b-203ENSMUST00000109770 3052 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
Gm6408J3QNG1 Capn1-202ENSMUST00000164843 3048 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
Gm6408J3QNG1 Naa10-205ENSMUST00000114390 797 ntTSL 5 BASIC17.07■□□□□ 0.32
Gm6408J3QNG1 Cox16-207ENSMUST00000169124 685 ntTSL 2 BASIC17.07■□□□□ 0.32
Gm6408J3QNG1 Arpc4-202ENSMUST00000171058 695 ntTSL 5 BASIC17.07■□□□□ 0.32
Gm6408J3QNG1 H2-K2-201ENSMUST00000174250 1049 ntBASIC17.07■□□□□ 0.32
Gm6408J3QNG1 Gm10517-202ENSMUST00000192970 758 ntBASIC17.07■□□□□ 0.32
Gm6408J3QNG1 Ly6g6d-201ENSMUST00000007259 546 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Gm6408J3QNG1 1700028I16Rik-201ENSMUST00000076984 1048 ntTSL 5 BASIC17.07■□□□□ 0.32
Gm6408J3QNG1 Cul4a-201ENSMUST00000016680 3728 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Gm6408J3QNG1 Zfp622-201ENSMUST00000061875 2802 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Gm6408J3QNG1 Zkscan14-201ENSMUST00000031632 1967 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Gm6408J3QNG1 Gpr180-201ENSMUST00000022728 1875 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Gm6408J3QNG1 Nelfb-201ENSMUST00000059849 2637 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Gm6408J3QNG1 Tfap2a-209ENSMUST00000225180 1828 ntBASIC17.07■□□□□ 0.32
Gm6408J3QNG1 Lhfpl4-201ENSMUST00000162280 4762 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Gm6408J3QNG1 Zmiz1-201ENSMUST00000007961 5397 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Gm6408J3QNG1 Homez-202ENSMUST00000142283 4713 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Gm6408J3QNG1 Fbxo22-201ENSMUST00000034859 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Gm6408J3QNG1 Zbtb24-202ENSMUST00000213797 2734 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Gm6408J3QNG1 Nfkbib-201ENSMUST00000032815 2061 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Gm6408J3QNG1 Fam181a-201ENSMUST00000179363 1406 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
Gm6408J3QNG1 Esyt2-205ENSMUST00000220816 4287 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Gm6408J3QNG1 Znrf1-201ENSMUST00000095176 3108 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Gm6408J3QNG1 Vrk2-201ENSMUST00000078362 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Gm6408J3QNG1 4930461C15Rik-201ENSMUST00000133622 1302 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Gm6408J3QNG1 Eif1-201ENSMUST00000049385 1322 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Gm6408J3QNG1 Ociad2-202ENSMUST00000200776 2359 ntTSL 3 BASIC17.06■□□□□ 0.32
Gm6408J3QNG1 Usp47-201ENSMUST00000106653 5540 ntAPPRIS P3 TSL 5 BASIC17.06■□□□□ 0.32
Gm6408J3QNG1 Chic2-201ENSMUST00000075452 9699 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Gm6408J3QNG1 Xiap-203ENSMUST00000115094 6542 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
Gm6408J3QNG1 C030014I23Rik-201ENSMUST00000080911 1810 ntBASIC17.06■□□□□ 0.32
Gm6408J3QNG1 4833428L15Rik-202ENSMUST00000215652 641 ntTSL 3 BASIC17.06■□□□□ 0.32
Gm6408J3QNG1 Syngr1-202ENSMUST00000009728 819 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Gm6408J3QNG1 Ick-201ENSMUST00000009972 873 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Gm6408J3QNG1 Tedc2-201ENSMUST00000024930 2166 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Gm6408J3QNG1 Prkra-201ENSMUST00000002808 1614 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Gm6408J3QNG1 Shroom4-202ENSMUST00000103005 4839 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Gm6408J3QNG1 Dhx32-201ENSMUST00000033290 2955 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Gm6408J3QNG1 Tasp1-201ENSMUST00000046656 2480 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Gm6408J3QNG1 Nfib-205ENSMUST00000107247 3267 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
Gm6408J3QNG1 Trp73-203ENSMUST00000105643 1916 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
Gm6408J3QNG1 Taok3-203ENSMUST00000111978 4467 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Gm6408J3QNG1 Nsmf-203ENSMUST00000100334 2957 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Gm6408J3QNG1 E230001N04Rik-202ENSMUST00000181029 2091 ntBASIC17.05■□□□□ 0.32
Gm6408J3QNG1 Trim67-202ENSMUST00000167588 8735 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
Gm6408J3QNG1 Zbtb9-201ENSMUST00000120016 2798 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Gm6408J3QNG1 Josd2-204ENSMUST00000118628 864 ntAPPRIS P1 TSL 2 BASIC17.05■□□□□ 0.32
Gm6408J3QNG1 Gm43183-201ENSMUST00000200632 547 ntBASIC17.05■□□□□ 0.32
Gm6408J3QNG1 Tpgs1-201ENSMUST00000020552 1143 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Gm6408J3QNG1 Josd2-201ENSMUST00000035844 930 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Gm6408J3QNG1 Ptprd-206ENSMUST00000107289 9899 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 23.9 ms