Protein–RNA interactions for Protein: F6ZNL5

Pcdh11x, Protocadherin 11 X-linked, mousemouse

Predictions only

Length 1,338 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh11xF6ZNL5 Pik3r2-201ENSMUST00000034296 3165 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Pcdh11xF6ZNL5 Coq8b-202ENSMUST00000108378 2276 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Pcdh11xF6ZNL5 Tfdp2-206ENSMUST00000185644 2646 ntAPPRIS P3 TSL 1 (best) BASIC18.91■□□□□ 0.62
Pcdh11xF6ZNL5 Gm26592-201ENSMUST00000180870 1730 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Pcdh11xF6ZNL5 Tnfrsf13c-201ENSMUST00000089161 1906 ntAPPRIS P2 TSL 1 (best) BASIC18.9■□□□□ 0.62
Pcdh11xF6ZNL5 Mark3-201ENSMUST00000075281 3321 ntAPPRIS P2 TSL 1 (best) BASIC18.9■□□□□ 0.62
Pcdh11xF6ZNL5 Vkorc1l1-203ENSMUST00000201855 4809 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Pcdh11xF6ZNL5 2610301B20Rik-201ENSMUST00000080517 2116 ntAPPRIS P2 TSL 1 (best) BASIC18.9■□□□□ 0.62
Pcdh11xF6ZNL5 Map3k10-201ENSMUST00000036453 3682 ntAPPRIS P2 TSL 1 (best) BASIC18.9■□□□□ 0.62
Pcdh11xF6ZNL5 Relb-201ENSMUST00000049912 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
Pcdh11xF6ZNL5 Bean1-201ENSMUST00000093245 3199 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
Pcdh11xF6ZNL5 Fam20c-201ENSMUST00000026972 3582 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Pcdh11xF6ZNL5 Epo-203ENSMUST00000111039 706 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
Pcdh11xF6ZNL5 Tpsg1-201ENSMUST00000024999 1186 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Pcdh11xF6ZNL5 Cmtm7-201ENSMUST00000035009 993 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Pcdh11xF6ZNL5 Grhpr-201ENSMUST00000045078 1280 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Pcdh11xF6ZNL5 Coro7-202ENSMUST00000090480 1147 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Pcdh11xF6ZNL5 Ggt6-202ENSMUST00000100903 1387 ntTSL 5 BASIC18.9■□□□□ 0.62
Pcdh11xF6ZNL5 Tekt1-203ENSMUST00000108503 1397 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Pcdh11xF6ZNL5 4930426L09Rik-201ENSMUST00000028069 1459 ntAPPRIS P1 BASIC18.9■□□□□ 0.62
Pcdh11xF6ZNL5 Dap-201ENSMUST00000044524 1555 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Pcdh11xF6ZNL5 C130026I21Rik-201ENSMUST00000064341 1561 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
Pcdh11xF6ZNL5 Enah-210ENSMUST00000193074 1971 ntAPPRIS ALT2 TSL 5 BASIC18.9■□□□□ 0.62
Pcdh11xF6ZNL5 Adcy2-201ENSMUST00000022013 4211 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Pcdh11xF6ZNL5 Sdc3-201ENSMUST00000070478 4973 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Pcdh11xF6ZNL5 Sytl3-201ENSMUST00000097430 2100 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Pcdh11xF6ZNL5 Yipf2-202ENSMUST00000078572 1894 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Pcdh11xF6ZNL5 Nr1h2-204ENSMUST00000107912 1839 ntAPPRIS P3 TSL 1 (best) BASIC18.89■□□□□ 0.61
Pcdh11xF6ZNL5 Hdhd2-202ENSMUST00000097521 1716 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Pcdh11xF6ZNL5 Gm7638-201ENSMUST00000121348 967 ntBASIC18.89■□□□□ 0.61
Pcdh11xF6ZNL5 Nrn1-202ENSMUST00000122286 691 ntTSL 3 BASIC18.89■□□□□ 0.61
Pcdh11xF6ZNL5 Impa1-204ENSMUST00000191670 1100 ntTSL 2 BASIC18.89■□□□□ 0.61
Pcdh11xF6ZNL5 Gm7977-201ENSMUST00000193787 748 ntBASIC18.89■□□□□ 0.61
Pcdh11xF6ZNL5 Gm29994-201ENSMUST00000195495 1193 ntBASIC18.89■□□□□ 0.61
Pcdh11xF6ZNL5 Gm42884-202ENSMUST00000202523 423 ntTSL 3 BASIC18.89■□□□□ 0.61
Pcdh11xF6ZNL5 Gm21814-202ENSMUST00000203277 873 ntBASIC18.89■□□□□ 0.61
Pcdh11xF6ZNL5 Casp3-203ENSMUST00000210534 583 ntTSL 5 BASIC18.89■□□□□ 0.61
Pcdh11xF6ZNL5 AC135963.1-201ENSMUST00000211640 717 ntBASIC18.89■□□□□ 0.61
Pcdh11xF6ZNL5 Timm23-208ENSMUST00000226683 750 ntBASIC18.89■□□□□ 0.61
Pcdh11xF6ZNL5 Gm10273-201ENSMUST00000092511 1126 ntAPPRIS P1 BASIC18.89■□□□□ 0.61
Pcdh11xF6ZNL5 Scrib-203ENSMUST00000109946 5545 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
Pcdh11xF6ZNL5 Arid3b-202ENSMUST00000098686 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
Pcdh11xF6ZNL5 Smarcc1-207ENSMUST00000199896 5773 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
Pcdh11xF6ZNL5 Sim1-202ENSMUST00000219436 1687 ntTSL 5 BASIC18.88■□□□□ 0.61
Pcdh11xF6ZNL5 Nf2-205ENSMUST00000109910 4720 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
Pcdh11xF6ZNL5 Chka-202ENSMUST00000072055 2549 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
Pcdh11xF6ZNL5 Rhof-201ENSMUST00000031401 2208 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Pcdh11xF6ZNL5 Plppr3-207ENSMUST00000167250 3063 ntAPPRIS ALT2 TSL 2 BASIC18.88■□□□□ 0.61
Pcdh11xF6ZNL5 Echdc2-204ENSMUST00000116309 1238 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Pcdh11xF6ZNL5 Nsg1-204ENSMUST00000201363 820 ntAPPRIS P1 TSL 2 BASIC18.88■□□□□ 0.61
Pcdh11xF6ZNL5 Stk11-210ENSMUST00000213772 1239 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
Pcdh11xF6ZNL5 Il3ra-202ENSMUST00000223589 738 ntBASIC18.88■□□□□ 0.61
Pcdh11xF6ZNL5 Tm2d1-201ENSMUST00000030292 952 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Pcdh11xF6ZNL5 Psmd4-201ENSMUST00000071664 1276 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
Pcdh11xF6ZNL5 Gm16835-201ENSMUST00000140488 2809 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Pcdh11xF6ZNL5 Zfp865-203ENSMUST00000085427 2751 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Pcdh11xF6ZNL5 Otud5-201ENSMUST00000033494 4259 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
Pcdh11xF6ZNL5 Kmt2b-201ENSMUST00000006470 8469 ntAPPRIS ALT2 TSL 5 BASIC18.88■□□□□ 0.61
Pcdh11xF6ZNL5 Fam171a2-201ENSMUST00000049057 3118 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Pcdh11xF6ZNL5 Mta3-203ENSMUST00000112350 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
Pcdh11xF6ZNL5 Negr1-202ENSMUST00000074015 4983 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Pcdh11xF6ZNL5 Rcc1-201ENSMUST00000030726 2278 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Pcdh11xF6ZNL5 Zfand5-201ENSMUST00000025659 2834 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Pcdh11xF6ZNL5 Fbxo22-201ENSMUST00000034859 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Pcdh11xF6ZNL5 Pdss2-201ENSMUST00000095725 2127 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Pcdh11xF6ZNL5 Crocc-202ENSMUST00000097816 6273 ntTSL 5 BASIC18.87■□□□□ 0.61
Pcdh11xF6ZNL5 Tmem163-203ENSMUST00000160616 2657 ntAPPRIS P1 TSL 2 BASIC18.87■□□□□ 0.61
Pcdh11xF6ZNL5 Eefsec-201ENSMUST00000165242 2679 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Pcdh11xF6ZNL5 Ctcf-201ENSMUST00000005841 3782 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Pcdh11xF6ZNL5 Ahcyl2-202ENSMUST00000102995 5155 ntAPPRIS ALT1 TSL 5 BASIC18.87■□□□□ 0.61
Pcdh11xF6ZNL5 Gpr161-202ENSMUST00000178700 1827 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
Pcdh11xF6ZNL5 Dnajb2-208ENSMUST00000188346 1823 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Pcdh11xF6ZNL5 Cpne1-217ENSMUST00000184265 871 ntTSL 5 BASIC18.87■□□□□ 0.61
Pcdh11xF6ZNL5 Smarca4-202ENSMUST00000098948 6376 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
Pcdh11xF6ZNL5 Gpr6-201ENSMUST00000061796 1786 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Pcdh11xF6ZNL5 A930029G22Rik-201ENSMUST00000181032 1710 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Pcdh11xF6ZNL5 Tnfrsf25-201ENSMUST00000025706 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
Pcdh11xF6ZNL5 Trim14-202ENSMUST00000102924 1582 ntTSL 2 BASIC18.87■□□□□ 0.61
Pcdh11xF6ZNL5 Ppfia1-201ENSMUST00000168134 5181 ntAPPRIS P3 TSL 1 (best) BASIC18.87■□□□□ 0.61
Pcdh11xF6ZNL5 Nsmf-201ENSMUST00000006646 2922 ntAPPRIS P3 TSL 1 (best) BASIC18.87■□□□□ 0.61
Pcdh11xF6ZNL5 Scrn2-201ENSMUST00000021249 1530 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Pcdh11xF6ZNL5 Tax1bp3-201ENSMUST00000040687 1523 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Pcdh11xF6ZNL5 AL590614.2-201ENSMUST00000225374 1937 ntBASIC18.87■□□□□ 0.61
Pcdh11xF6ZNL5 Mmp23-201ENSMUST00000030937 1434 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Pcdh11xF6ZNL5 Zbtb45-201ENSMUST00000051390 2171 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Pcdh11xF6ZNL5 March3-202ENSMUST00000102912 1754 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Pcdh11xF6ZNL5 Gm2788-202ENSMUST00000147173 1390 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Pcdh11xF6ZNL5 Sort1-203ENSMUST00000135636 6836 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
Pcdh11xF6ZNL5 Fosl1-201ENSMUST00000025850 1707 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Pcdh11xF6ZNL5 Stxbp5-209ENSMUST00000141722 4702 ntAPPRIS P2 TSL 5 BASIC18.86■□□□□ 0.61
Pcdh11xF6ZNL5 Prmt2-202ENSMUST00000099571 2052 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
Pcdh11xF6ZNL5 Atp23-201ENSMUST00000026504 903 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Pcdh11xF6ZNL5 Lce1m-201ENSMUST00000029520 874 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Pcdh11xF6ZNL5 Lysmd2-201ENSMUST00000034702 1189 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Pcdh11xF6ZNL5 Ctsf-201ENSMUST00000119694 1975 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Pcdh11xF6ZNL5 Sar1a-201ENSMUST00000020285 2613 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Pcdh11xF6ZNL5 Tm7sf3-201ENSMUST00000037709 3241 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Pcdh11xF6ZNL5 Rundc3a-202ENSMUST00000107102 1837 ntAPPRIS ALT2 TSL 5 BASIC18.86■□□□□ 0.61
Pcdh11xF6ZNL5 Slc38a10-202ENSMUST00000053692 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
Pcdh11xF6ZNL5 Fam166b-201ENSMUST00000052829 1349 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Retrieved 100 of 76,532 protein–RNA pairs in 33.4 ms