Protein–RNA interactions for Protein: B2RVW2

Clrn2, Clarin 2, mousemouse

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clrn2B2RVW2 Hsd17b1-201ENSMUST00000019445 1339 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Clrn2B2RVW2 Ankrd23-204ENSMUST00000194853 1073 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Clrn2B2RVW2 Gm43077-201ENSMUST00000200602 491 ntTSL 3 BASIC19.8■□□□□ 0.76
Clrn2B2RVW2 AC164629.2-201ENSMUST00000217916 270 ntBASIC19.8■□□□□ 0.76
Clrn2B2RVW2 Hist1h2ai-201ENSMUST00000070124 393 ntAPPRIS P1 BASIC19.8■□□□□ 0.76
Clrn2B2RVW2 Sult2b1-201ENSMUST00000075571 1193 ntAPPRIS P2 TSL 1 (best) BASIC19.8■□□□□ 0.76
Clrn2B2RVW2 Hist1h2an-201ENSMUST00000091751 393 ntAPPRIS P1 BASIC19.8■□□□□ 0.76
Clrn2B2RVW2 Phf7-203ENSMUST00000226565 1971 ntBASIC19.8■□□□□ 0.76
Clrn2B2RVW2 Gm19554-201ENSMUST00000220934 2076 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Clrn2B2RVW2 Ppp2r2d-207ENSMUST00000155672 1938 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Clrn2B2RVW2 Laptm4b-201ENSMUST00000022867 1902 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Clrn2B2RVW2 March3-202ENSMUST00000102912 1754 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Clrn2B2RVW2 Kbtbd13-201ENSMUST00000068307 2969 ntAPPRIS P1 BASIC19.8■□□□□ 0.76
Clrn2B2RVW2 Kcnn2-208ENSMUST00000211323 2046 ntAPPRIS P2 TSL 1 (best) BASIC19.8■□□□□ 0.76
Clrn2B2RVW2 Ccdc17-201ENSMUST00000051869 2003 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Clrn2B2RVW2 Cd37-204ENSMUST00000209779 2541 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Clrn2B2RVW2 Upf1-201ENSMUST00000075666 4618 ntAPPRIS P2 TSL 1 (best) BASIC19.79■□□□□ 0.76
Clrn2B2RVW2 Ispd-207ENSMUST00000223205 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
Clrn2B2RVW2 Bmt2-201ENSMUST00000045235 4143 ntAPPRIS P2 TSL 1 (best) BASIC19.79■□□□□ 0.76
Clrn2B2RVW2 Nr1h2-213ENSMUST00000167197 1944 ntAPPRIS P3 TSL 5 BASIC19.79■□□□□ 0.76
Clrn2B2RVW2 3110002H16Rik-201ENSMUST00000025276 2170 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Clrn2B2RVW2 Naa10-204ENSMUST00000114389 1031 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
Clrn2B2RVW2 Mis18bp1-202ENSMUST00000124201 717 ntTSL 3 BASIC19.79■□□□□ 0.76
Clrn2B2RVW2 Sytl3-204ENSMUST00000159880 1296 ntTSL 5 BASIC19.79■□□□□ 0.76
Clrn2B2RVW2 Gm28659-201ENSMUST00000188013 759 ntBASIC19.79■□□□□ 0.76
Clrn2B2RVW2 Helt-201ENSMUST00000058636 1541 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Clrn2B2RVW2 Caskin1-201ENSMUST00000024958 6172 ntAPPRIS P1 TSL 5 BASIC19.79■□□□□ 0.76
Clrn2B2RVW2 Ern1-204ENSMUST00000106801 1957 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Clrn2B2RVW2 Platr31-201ENSMUST00000180653 1466 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Clrn2B2RVW2 Rhoa-201ENSMUST00000007959 2197 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Clrn2B2RVW2 P2ry2-204ENSMUST00000207916 2372 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Clrn2B2RVW2 Epn1-207ENSMUST00000208634 2127 ntAPPRIS ALT2 TSL 5 BASIC19.78■□□□□ 0.76
Clrn2B2RVW2 Notch4-201ENSMUST00000015612 6591 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Clrn2B2RVW2 Zkscan14-201ENSMUST00000031632 1967 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Clrn2B2RVW2 Adal-203ENSMUST00000110662 1231 ntTSL 5 BASIC19.78■□□□□ 0.76
Clrn2B2RVW2 2310009B15Rik-201ENSMUST00000112025 565 ntAPPRIS P1 TSL 2 BASIC19.78■□□□□ 0.76
Clrn2B2RVW2 Gm12895-201ENSMUST00000122214 226 ntBASIC19.78■□□□□ 0.76
Clrn2B2RVW2 Pqlc1-208ENSMUST00000144468 1050 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Clrn2B2RVW2 Gm27459-201ENSMUST00000184860 107 ntBASIC19.78■□□□□ 0.76
Clrn2B2RVW2 Cklf-201ENSMUST00000034342 667 ntAPPRIS P4 TSL 1 (best) BASIC19.78■□□□□ 0.76
Clrn2B2RVW2 Vhl-201ENSMUST00000035673 2792 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Clrn2B2RVW2 Ano10-206ENSMUST00000216670 2108 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Clrn2B2RVW2 Mplkip-201ENSMUST00000049744 2672 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Clrn2B2RVW2 Slc16a10-202ENSMUST00000213488 2325 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
Clrn2B2RVW2 Dcun1d1-201ENSMUST00000108182 4980 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Clrn2B2RVW2 Acads-201ENSMUST00000031524 1870 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Clrn2B2RVW2 Rab40c-207ENSMUST00000167626 2506 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Clrn2B2RVW2 Gm16712-201ENSMUST00000181962 1960 ntTSL 2 BASIC19.77■□□□□ 0.76
Clrn2B2RVW2 Ascl2-201ENSMUST00000009392 1605 ntAPPRIS P2 TSL 1 (best) BASIC19.77■□□□□ 0.76
Clrn2B2RVW2 Glmn-201ENSMUST00000078021 2015 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Clrn2B2RVW2 Lcn12-202ENSMUST00000114245 619 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
Clrn2B2RVW2 Gm13186-201ENSMUST00000118031 316 ntBASIC19.77■□□□□ 0.76
Clrn2B2RVW2 Gm13524-201ENSMUST00000125869 662 ntTSL 3 BASIC19.77■□□□□ 0.76
Clrn2B2RVW2 Gm19553-201ENSMUST00000175723 494 ntTSL 5 BASIC19.77■□□□□ 0.76
Clrn2B2RVW2 Gm26871-202ENSMUST00000180774 695 ntTSL 2 BASIC19.77■□□□□ 0.76
Clrn2B2RVW2 Arhgap33-206ENSMUST00000208522 781 ntTSL 3 BASIC19.77■□□□□ 0.76
Clrn2B2RVW2 Tmem121b-201ENSMUST00000178687 4869 ntAPPRIS P1 BASIC19.77■□□□□ 0.76
Clrn2B2RVW2 Pfn2-201ENSMUST00000066882 2342 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Clrn2B2RVW2 Nisch-221ENSMUST00000171735 1763 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
Clrn2B2RVW2 Cog6-204ENSMUST00000193432 2078 ntTSL 1 (best) BASIC19.77■□□□□ 0.75
Clrn2B2RVW2 Sema6d-203ENSMUST00000077847 6444 ntTSL 5 BASIC19.77■□□□□ 0.75
Clrn2B2RVW2 H2-DMb1-201ENSMUST00000114232 1404 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Clrn2B2RVW2 Irak2-203ENSMUST00000089023 1734 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Clrn2B2RVW2 Cmip-202ENSMUST00000166750 2408 ntAPPRIS P1 TSL 5 BASIC19.76■□□□□ 0.75
Clrn2B2RVW2 Cnr1-201ENSMUST00000057188 5807 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Clrn2B2RVW2 Rps6ka2-201ENSMUST00000024575 5404 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Clrn2B2RVW2 Gm43347-201ENSMUST00000200226 580 ntBASIC19.76■□□□□ 0.75
Clrn2B2RVW2 Mrpl36-202ENSMUST00000221730 717 ntAPPRIS P1 TSL 3 BASIC19.76■□□□□ 0.75
Clrn2B2RVW2 Gm9991-201ENSMUST00000070048 1207 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Clrn2B2RVW2 Sart1-201ENSMUST00000044207 5091 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Clrn2B2RVW2 F8a-201ENSMUST00000105111 2505 ntAPPRIS P1 BASIC19.76■□□□□ 0.75
Clrn2B2RVW2 Fam83d-201ENSMUST00000029183 2266 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Clrn2B2RVW2 Nudt19-201ENSMUST00000040962 2298 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Clrn2B2RVW2 Tob1-201ENSMUST00000041589 2288 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Clrn2B2RVW2 Eif3b-201ENSMUST00000100507 2945 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Clrn2B2RVW2 Itgb5-202ENSMUST00000115028 3090 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Clrn2B2RVW2 Gnb2-203ENSMUST00000111023 1471 ntTSL 5 BASIC19.75■□□□□ 0.75
Clrn2B2RVW2 Bcap29-201ENSMUST00000020979 1949 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Clrn2B2RVW2 Ino80e-201ENSMUST00000050833 1944 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Clrn2B2RVW2 Nat9-203ENSMUST00000103040 1204 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Clrn2B2RVW2 Nat9-204ENSMUST00000103041 953 ntAPPRIS P1 TSL 5 BASIC19.75■□□□□ 0.75
Clrn2B2RVW2 Gm13884-201ENSMUST00000118103 829 ntBASIC19.75■□□□□ 0.75
Clrn2B2RVW2 Gm19935-201ENSMUST00000209208 979 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Clrn2B2RVW2 Med29-201ENSMUST00000003536 1281 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Clrn2B2RVW2 Thrsp-201ENSMUST00000043077 1277 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Clrn2B2RVW2 Xkr6-201ENSMUST00000119973 2963 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Clrn2B2RVW2 Pomgnt2-207ENSMUST00000217610 2413 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Clrn2B2RVW2 Neurl1b-201ENSMUST00000053020 6195 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Clrn2B2RVW2 Smarcc1-207ENSMUST00000199896 5773 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
Clrn2B2RVW2 Dok5-201ENSMUST00000029075 1768 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Clrn2B2RVW2 Sh3bp1-202ENSMUST00000061239 1917 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Clrn2B2RVW2 Slc2a13-202ENSMUST00000109283 6536 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Clrn2B2RVW2 Cldn4-201ENSMUST00000051401 1816 ntAPPRIS P1 BASIC19.74■□□□□ 0.75
Clrn2B2RVW2 Mfhas1-201ENSMUST00000037666 6408 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Clrn2B2RVW2 Itsn2-215ENSMUST00000220311 6080 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
Clrn2B2RVW2 Mfsd6-205ENSMUST00000156876 4932 ntAPPRIS P4 TSL 5 BASIC19.74■□□□□ 0.75
Clrn2B2RVW2 Ager-201ENSMUST00000015596 1370 ntAPPRIS P3 TSL 1 (best) BASIC19.74■□□□□ 0.75
Clrn2B2RVW2 Kcnk10-203ENSMUST00000221305 1357 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Clrn2B2RVW2 Taco1os-201ENSMUST00000140736 644 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Clrn2B2RVW2 Gm12359-202ENSMUST00000141696 713 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Retrieved 100 of 76,532 protein–RNA pairs in 34.7 ms